메뉴 건너뛰기




Volumn 36, Issue 3, 2007, Pages 313-331

A SAGE study of apolipoprotein E3/3, E3/4 and E4/4 allele-specific gene expression in hippocampus in Alzheimer disease

Author keywords

Alzheimer disease; Apolipoprotein E; Apoptosis; Serial analysis of gene expression (SAGE); Signal pathways

Indexed keywords

APOLIPOPROTEIN E3; APOLIPOPROTEIN E4; CALCIUM; NEUROTRANSMITTER RECEPTOR;

EID: 35448984980     PISSN: 10447431     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.mcn.2007.06.009     Document Type: Article
Times cited : (36)

References (53)
  • 2
    • 0036990053 scopus 로고    scopus 로고
    • A quantitative and validated SAGE transcriptome reference for adult mouse heart
    • Anisimov S.V., Tarasov K.V., Stern M.D., Lakatta E.G., and Boheler K.R. A quantitative and validated SAGE transcriptome reference for adult mouse heart. Genomics 80 (2002) 213-222
    • (2002) Genomics , vol.80 , pp. 213-222
    • Anisimov, S.V.1    Tarasov, K.V.2    Stern, M.D.3    Lakatta, E.G.4    Boheler, K.R.5
  • 3
    • 0035368680 scopus 로고    scopus 로고
    • How does calcium trigger neurotransmitter release?
    • Augustine G.J. How does calcium trigger neurotransmitter release?. Curr. Opin. Neurobiol. 11 (2001) 320-326
    • (2001) Curr. Opin. Neurobiol. , vol.11 , pp. 320-326
    • Augustine, G.J.1
  • 4
    • 0036810329 scopus 로고    scopus 로고
    • Alzheimer's disease and the basal forebrain cholinergic system: relations to beta-amyloid peptides, cognition, and treatment strategies
    • Auld D.S., Kornecook T.J., Bastianetto S., and Quirion R. Alzheimer's disease and the basal forebrain cholinergic system: relations to beta-amyloid peptides, cognition, and treatment strategies. Prog. Neurobiol. 68 (2002) 209-245
    • (2002) Prog. Neurobiol. , vol.68 , pp. 209-245
    • Auld, D.S.1    Kornecook, T.J.2    Bastianetto, S.3    Quirion, R.4
  • 5
    • 0034793334 scopus 로고    scopus 로고
    • Exploring haplotype sharing methods in general and isolated populations to detect gene(s) of a complex genetic trait
    • Beckmann L., Fischer C., Deck K.G., Nolte I.M., te M.G., and Chang-Claude J. Exploring haplotype sharing methods in general and isolated populations to detect gene(s) of a complex genetic trait. Genet. Epidemiol. 21 Suppl 1 (2001) S554-S559
    • (2001) Genet. Epidemiol. , vol.21 , Issue.SUPPL. 1
    • Beckmann, L.1    Fischer, C.2    Deck, K.G.3    Nolte, I.M.4    te, M.G.5    Chang-Claude, J.6
  • 6
    • 0001677717 scopus 로고
    • Controlling the false discovery rate: a practical and powerful approach to multiple testing
    • Benjamini Y., and Hochberg Y. Controlling the false discovery rate: a practical and powerful approach to multiple testing. J. R. Stat. Soc. 57 (1995) 289-300
    • (1995) J. R. Stat. Soc. , vol.57 , pp. 289-300
    • Benjamini, Y.1    Hochberg, Y.2
  • 7
    • 1242341923 scopus 로고    scopus 로고
    • Incipient Alzheimer's disease: microarray correlation analyses reveal major transcriptional and tumor suppressor responses
    • Blalock E.M., Geddes J.W., Chen K.C., Porter N.M., Markesbery W.R., and Landfield P.W. Incipient Alzheimer's disease: microarray correlation analyses reveal major transcriptional and tumor suppressor responses. Proc. Natl. Acad. Sci. U. S. A. 101 (2004) 2173-2178
    • (2004) Proc. Natl. Acad. Sci. U. S. A. , vol.101 , pp. 2173-2178
    • Blalock, E.M.1    Geddes, J.W.2    Chen, K.C.3    Porter, N.M.4    Markesbery, W.R.5    Landfield, P.W.6
  • 8
    • 0025863618 scopus 로고
    • Neuropathological stageing of Alzheimer-related changes
    • Braak H., and Braak E. Neuropathological stageing of Alzheimer-related changes. Acta Neuropathol. (Berl) 82 (1991) 239-259
    • (1991) Acta Neuropathol. (Berl) , vol.82 , pp. 239-259
    • Braak, H.1    Braak, E.2
  • 9
    • 0024260675 scopus 로고
    • Alzheimer's disease and dementia
    • Choi D.W. Alzheimer's disease and dementia. Med. Sect. Proc. (1988) 129-155
    • (1988) Med. Sect. Proc. , pp. 129-155
    • Choi, D.W.1
  • 10
    • 0037010289 scopus 로고    scopus 로고
    • Gene expression profiling of 12633 genes in Alzheimer hippocampal CA1: transcription and neurotrophic factor down-regulation and up-regulation of apoptotic and pro-inflammatory signaling
    • Colangelo V., Schurr J., Ball M.J., Pelaez R.P., Bazan N.G., and Lukiw W.J. Gene expression profiling of 12633 genes in Alzheimer hippocampal CA1: transcription and neurotrophic factor down-regulation and up-regulation of apoptotic and pro-inflammatory signaling. J. Neurosci. Res. 70 (2002) 462-473
    • (2002) J. Neurosci. Res. , vol.70 , pp. 462-473
    • Colangelo, V.1    Schurr, J.2    Ball, M.J.3    Pelaez, R.P.4    Bazan, N.G.5    Lukiw, W.J.6
  • 11
    • 0345276572 scopus 로고    scopus 로고
    • Synaptic slaughter in Alzheimer's disease
    • Coleman P.D., and Yao P.J. Synaptic slaughter in Alzheimer's disease. Neurobiol. Aging 24 (2003) 1023-1027
    • (2003) Neurobiol. Aging , vol.24 , pp. 1023-1027
    • Coleman, P.D.1    Yao, P.J.2
  • 14
    • 0031455789 scopus 로고    scopus 로고
    • Comparison of nonparametric statistics for detection of linkage analysis in nuclear families: single marker evaluation
    • Davis S., and Weeks D.E. Comparison of nonparametric statistics for detection of linkage analysis in nuclear families: single marker evaluation. Am. J. Hum. Genet. 61 (1997) 1431-1444
    • (1997) Am. J. Hum. Genet. , vol.61 , pp. 1431-1444
    • Davis, S.1    Weeks, D.E.2
  • 15
    • 0025269152 scopus 로고
    • Synapse loss in frontal cortex biopsies in Alzheimer's disease: correlation with cognitive severity
    • DeKosky S.T., and Scheff S.W. Synapse loss in frontal cortex biopsies in Alzheimer's disease: correlation with cognitive severity. Ann. Neurol. 27 (1990) 457-464
    • (1990) Ann. Neurol. , vol.27 , pp. 457-464
    • DeKosky, S.T.1    Scheff, S.W.2
  • 16
    • 0034600424 scopus 로고    scopus 로고
    • Unfractionated heparin and low-molecular-weight heparin in acute coronary syndrome without St elevation: a meta-analysis
    • Eikelboom J.W., Anand S.S., Malmberg K., Weitz J.I., Ginsberg J.S., and Yusuf S. Unfractionated heparin and low-molecular-weight heparin in acute coronary syndrome without St elevation: a meta-analysis. Lancet 355 (2000) 1936-1942
    • (2000) Lancet , vol.355 , pp. 1936-1942
    • Eikelboom, J.W.1    Anand, S.S.2    Malmberg, K.3    Weitz, J.I.4    Ginsberg, J.S.5    Yusuf, S.6
  • 17
    • 1842505441 scopus 로고    scopus 로고
    • Stress induction and mitochondrial localization of Oxr1 proteins in yeast and humans
    • Elliott N.A., and Volkert M.R. Stress induction and mitochondrial localization of Oxr1 proteins in yeast and humans. Mol. Cell. Biol. 24 (2004) 3180-3187
    • (2004) Mol. Cell. Biol. , vol.24 , pp. 3180-3187
    • Elliott, N.A.1    Volkert, M.R.2
  • 18
    • 0036460083 scopus 로고    scopus 로고
    • Evaluation of Affymetrix Gene Chip sensitivity in rat hippocampal tissue using SAGE analysis. Serial Analysis of Gene Expression
    • Evans S.J., Datson N.A., Kabbaj M., Thompson R.C., Vreugdenhil E., de Kloet E.R., Watson S.J., and Akil H. Evaluation of Affymetrix Gene Chip sensitivity in rat hippocampal tissue using SAGE analysis. Serial Analysis of Gene Expression. Eur. J. Neurosci. 16 (2002) 409-413
    • (2002) Eur. J. Neurosci. , vol.16 , pp. 409-413
    • Evans, S.J.1    Datson, N.A.2    Kabbaj, M.3    Thompson, R.C.4    Vreugdenhil, E.5    de Kloet, E.R.6    Watson, S.J.7    Akil, H.8
  • 20
    • 0033797062 scopus 로고    scopus 로고
    • Neuropathological, biochemical and genetic alterations in AD
    • George-Hyslop P.H., McLaurin J., and Fraser P.E. Neuropathological, biochemical and genetic alterations in AD. Drug News Perspect. 13 (2000) 281-288
    • (2000) Drug News Perspect. , vol.13 , pp. 281-288
    • George-Hyslop, P.H.1    McLaurin, J.2    Fraser, P.E.3
  • 21
    • 0036246654 scopus 로고    scopus 로고
    • Global analysis of gene expression patterns in developing mouse neocortex using serial analysis of gene expression
    • Gunnersen J.M., Augustine C., Spirkoska V., Kim M., Brown M., and Tan S.S. Global analysis of gene expression patterns in developing mouse neocortex using serial analysis of gene expression. Mol. Cell. Neurosci. 19 (2002) 560-573
    • (2002) Mol. Cell. Neurosci. , vol.19 , pp. 560-573
    • Gunnersen, J.M.1    Augustine, C.2    Spirkoska, V.3    Kim, M.4    Brown, M.5    Tan, S.S.6
  • 22
    • 0032543146 scopus 로고    scopus 로고
    • Inhibitors of interleukin-1 beta-converting enzyme-family proteases (caspases) prevent apoptosis without affecting decreased cellular ability to reduce 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide in cerebellar granule neurons
    • Harada J., and Sugimoto M. Inhibitors of interleukin-1 beta-converting enzyme-family proteases (caspases) prevent apoptosis without affecting decreased cellular ability to reduce 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide in cerebellar granule neurons. Brain Res. 793 (1998) 231-243
    • (1998) Brain Res. , vol.793 , pp. 231-243
    • Harada, J.1    Sugimoto, M.2
  • 23
    • 0035830695 scopus 로고    scopus 로고
    • Altered expression of a-type but not b-type synapsin isoform in the brain of patients at high risk for Alzheimer's disease assessed by DNA microarray technique
    • Ho L., Guo Y., Spielman L., Petrescu O., Haroutunian V., Purohit D., Czernik A., Yemul S., Aisen P.S., Mohs R., and Pasinetti G.M. Altered expression of a-type but not b-type synapsin isoform in the brain of patients at high risk for Alzheimer's disease assessed by DNA microarray technique. Neurosci. Lett. 298 (2001) 191-194
    • (2001) Neurosci. Lett. , vol.298 , pp. 191-194
    • Ho, L.1    Guo, Y.2    Spielman, L.3    Petrescu, O.4    Haroutunian, V.5    Purohit, D.6    Czernik, A.7    Yemul, S.8    Aisen, P.S.9    Mohs, R.10    Pasinetti, G.M.11
  • 26
    • 0029952311 scopus 로고    scopus 로고
    • Absolute mRNA levels and transcriptional initiation rates in Saccharomyces cerevisiae
    • Iyer V., and Struhl K. Absolute mRNA levels and transcriptional initiation rates in Saccharomyces cerevisiae. Proc. Natl. Acad. Sci. U. S. A. 93 (1996) 5208-5212
    • (1996) Proc. Natl. Acad. Sci. U. S. A. , vol.93 , pp. 5208-5212
    • Iyer, V.1    Struhl, K.2
  • 27
    • 0027205324 scopus 로고
    • The elusive transporters with a high affinity for glutamate
    • Kanai Y., Smith C.P., and Hediger M.A. The elusive transporters with a high affinity for glutamate. Trends Neurosci. 16 (1993) 365-370
    • (1993) Trends Neurosci. , vol.16 , pp. 365-370
    • Kanai, Y.1    Smith, C.P.2    Hediger, M.A.3
  • 28
    • 0141960930 scopus 로고    scopus 로고
    • 2+ sensor for neurotransmitter release
    • 2+ sensor for neurotransmitter release. Trends Neurosci. 26 (2003) 413-422
    • (2003) Trends Neurosci. , vol.26 , pp. 413-422
    • Koh, T.W.1    Bellen, H.J.2
  • 29
    • 0034352940 scopus 로고    scopus 로고
    • POWER_SAGE: comparing statistical tests for SAGE experiments
    • Man M.Z., Wang X., and Wang Y. POWER_SAGE: comparing statistical tests for SAGE experiments. Bioinformatics 16 (2000) 953-959
    • (2000) Bioinformatics , vol.16 , pp. 953-959
    • Man, M.Z.1    Wang, X.2    Wang, Y.3
  • 30
    • 2342628596 scopus 로고    scopus 로고
    • Differential expression of oxidative phosphorylation genes in patients with Alzheimer's disease: implications for early mitochondrial dysfunction and oxidative damage
    • Manczak M., Park B.S., Jung Y., and Reddy P.H. Differential expression of oxidative phosphorylation genes in patients with Alzheimer's disease: implications for early mitochondrial dysfunction and oxidative damage. Neuromolecular Med. 5 (2004) 147-162
    • (2004) Neuromolecular Med. , vol.5 , pp. 147-162
    • Manczak, M.1    Park, B.S.2    Jung, Y.3    Reddy, P.H.4
  • 31
    • 0033759238 scopus 로고    scopus 로고
    • eSAGE: managing and analysing data generated with serial analysis of gene expression (SAGE)
    • Margulies E.H., and Innis J.W. eSAGE: managing and analysing data generated with serial analysis of gene expression (SAGE). Bioinformatics 16 (2000) 650-651
    • (2000) Bioinformatics , vol.16 , pp. 650-651
    • Margulies, E.H.1    Innis, J.W.2
  • 32
    • 0030668223 scopus 로고    scopus 로고
    • Neuropathological criteria for the diagnosis of Alzheimer's disease
    • Markesbery W.R. Neuropathological criteria for the diagnosis of Alzheimer's disease. Neurobiol. Aging 4 Supplement 1 (1997) S13-S19
    • (1997) Neurobiol. Aging , vol.4 , Issue.SUPPL. 1
    • Markesbery, W.R.1
  • 33
    • 0025908356 scopus 로고
    • The Consortium to Establish a Registry for Alzheimer's Disease (CERAD): Part II. Standardization of the neuropathologic assessment of Alzheimer's disease
    • Mirra S.S., Heyman A., McKeel D., Sumi S.M., Crain B.J., Brownlee L.M., Vogel F.S., Hughes J.P., Van Belle G., and Berg L. The Consortium to Establish a Registry for Alzheimer's Disease (CERAD): Part II. Standardization of the neuropathologic assessment of Alzheimer's disease. Neurology 41 (1991) 479-486
    • (1991) Neurology , vol.41 , pp. 479-486
    • Mirra, S.S.1    Heyman, A.2    McKeel, D.3    Sumi, S.M.4    Crain, B.J.5    Brownlee, L.M.6    Vogel, F.S.7    Hughes, J.P.8    Van Belle, G.9    Berg, L.10
  • 34
    • 0036808469 scopus 로고    scopus 로고
    • Gene expression profiles of cholinergic nucleus basalis neurons in Alzheimer's disease
    • Mufson E.J., Counts S.E., and Ginsberg S.D. Gene expression profiles of cholinergic nucleus basalis neurons in Alzheimer's disease. Neurochem. Res. 27 (2002) 1035-1048
    • (2002) Neurochem. Res. , vol.27 , pp. 1035-1048
    • Mufson, E.J.1    Counts, S.E.2    Ginsberg, S.D.3
  • 36
    • 0034996104 scopus 로고    scopus 로고
    • Mitochondrial function and Alzheimer's disease
    • Ojaimi J., and Byrne E. Mitochondrial function and Alzheimer's disease. Biol. Signals Recept. 10 (2001) 254-262
    • (2001) Biol. Signals Recept. , vol.10 , pp. 254-262
    • Ojaimi, J.1    Byrne, E.2
  • 37
    • 0034775513 scopus 로고    scopus 로고
    • From cDNA microarrays to high-throughput proteomics. Implications in the search for preventive initiatives to slow the clinical progression of Alzheimer's disease dementia
    • Pasinetti G.M., and Ho L. From cDNA microarrays to high-throughput proteomics. Implications in the search for preventive initiatives to slow the clinical progression of Alzheimer's disease dementia. Restor. Neurol. Neurosci. 18 (2001) 137-142
    • (2001) Restor. Neurol. Neurosci. , vol.18 , pp. 137-142
    • Pasinetti, G.M.1    Ho, L.2
  • 38
    • 0027298061 scopus 로고
    • Cholesterol synthesis and lipoprotein reuptake during synaptic remodelling in hippocampus in adult rats
    • Poirier J., Baccichet A., Dea D., and Gauthier S. Cholesterol synthesis and lipoprotein reuptake during synaptic remodelling in hippocampus in adult rats. Neuroscience 55 (1993) 81-90
    • (1993) Neuroscience , vol.55 , pp. 81-90
    • Poirier, J.1    Baccichet, A.2    Dea, D.3    Gauthier, S.4
  • 39
    • 0001883841 scopus 로고    scopus 로고
    • Molecular mechanisms of brain aging and neurodegenerative disorders: lessons from dietary restriction
    • Prolla T.A., and Mattson M.P. Molecular mechanisms of brain aging and neurodegenerative disorders: lessons from dietary restriction. TINS 24 (2001) S21-S31
    • (2001) TINS , vol.24
    • Prolla, T.A.1    Mattson, M.P.2
  • 40
    • 0027374047 scopus 로고
    • Apolipoprotein E in sporadic Alzheimer's disease: allelic variation and receptor interactions
    • Rebeck G.W., Reiter J.S., Strickland D.K., and Hyman B.T. Apolipoprotein E in sporadic Alzheimer's disease: allelic variation and receptor interactions. Neuron 11 (1993) 575-580
    • (1993) Neuron , vol.11 , pp. 575-580
    • Rebeck, G.W.1    Reiter, J.S.2    Strickland, D.K.3    Hyman, B.T.4
  • 41
    • 0029030610 scopus 로고
    • Selective loss of glial glutamate transporter GLT-1 in amyotrophic lateral sclerosis
    • Rothstein J.D., Van Kammen M., Levey A.I., Martin L.J., and Kuncl R.W. Selective loss of glial glutamate transporter GLT-1 in amyotrophic lateral sclerosis. Ann. Neurol. 38 (1995) 73-84
    • (1995) Ann. Neurol. , vol.38 , pp. 73-84
    • Rothstein, J.D.1    Van Kammen, M.2    Levey, A.I.3    Martin, L.J.4    Kuncl, R.W.5
  • 43
    • 33747760358 scopus 로고    scopus 로고
    • Hippocampal synaptic loss in early Alzheimer's disease and mild cognitive impairment
    • Scheff S.W., Price D.A., Schmitt F.A., and Mufson E.J. Hippocampal synaptic loss in early Alzheimer's disease and mild cognitive impairment. Neurobiol. Aging 27 (2006) 1372-1384
    • (2006) Neurobiol. Aging , vol.27 , pp. 1372-1384
    • Scheff, S.W.1    Price, D.A.2    Schmitt, F.A.3    Mufson, E.J.4
  • 44
    • 0035233085 scopus 로고    scopus 로고
    • Global transcript expression profiling by Serial Analysis of Gene Expression (SAGE)
    • Scott H.S., and Chrast R. Global transcript expression profiling by Serial Analysis of Gene Expression (SAGE). Genet. Eng. (NY) 23 (2001) 201-219
    • (2001) Genet. Eng. (NY) , vol.23 , pp. 201-219
    • Scott, H.S.1    Chrast, R.2
  • 46
    • 15244352734 scopus 로고    scopus 로고
    • Calcium dysregulation, IP3 signaling, and Alzheimer's disease
    • Stutzmann G.E. Calcium dysregulation, IP3 signaling, and Alzheimer's disease. Neuroscientist 11 (2005) 110-115
    • (2005) Neuroscientist , vol.11 , pp. 110-115
    • Stutzmann, G.E.1
  • 47
    • 0037452698 scopus 로고    scopus 로고
    • Insights into glutamate transport regulation in human astrocytes: cloning of the promoter for excitatory amino acid transporter 2 (EAAT2)
    • Su Z.Z., Leszczyniecka M., Kang D.C., Sarkar D., Chao W., Volsky D.J., and Fisher P.B. Insights into glutamate transport regulation in human astrocytes: cloning of the promoter for excitatory amino acid transporter 2 (EAAT2). Proc. Natl. Acad. Sci. U. S. A. 100 (2003) 1955-1960
    • (2003) Proc. Natl. Acad. Sci. U. S. A. , vol.100 , pp. 1955-1960
    • Su, Z.Z.1    Leszczyniecka, M.2    Kang, D.C.3    Sarkar, D.4    Chao, W.5    Volsky, D.J.6    Fisher, P.B.7
  • 50
    • 0025987048 scopus 로고
    • Physical basis of cognitive alterations in Alzheimer's disease: synapse loss is the major correlate of cognitive impairment
    • Terry R.D., Masliah E., Salmon D.P., Butters N., DeTeresa R., Hill R., Hansen L.A., and Katzman R. Physical basis of cognitive alterations in Alzheimer's disease: synapse loss is the major correlate of cognitive impairment. Ann. Neurol. 30 (1991) 572-580
    • (1991) Ann. Neurol. , vol.30 , pp. 572-580
    • Terry, R.D.1    Masliah, E.2    Salmon, D.P.3    Butters, N.4    DeTeresa, R.5    Hill, R.6    Hansen, L.A.7    Katzman, R.8
  • 53
    • 0037343844 scopus 로고    scopus 로고
    • Defects in expression of genes related to synaptic vesicle trafficking in frontal cortex of Alzheimer's disease
    • Yao P.J., Zhu M., Pyun E.I., Brooks A.I., Therianos S., Meyers V.E., and Coleman P.D. Defects in expression of genes related to synaptic vesicle trafficking in frontal cortex of Alzheimer's disease. Neurobiol. Dis. 12 (2003) 97-109
    • (2003) Neurobiol. Dis. , vol.12 , pp. 97-109
    • Yao, P.J.1    Zhu, M.2    Pyun, E.I.3    Brooks, A.I.4    Therianos, S.5    Meyers, V.E.6    Coleman, P.D.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.