Genotyping spring viraemia of carp virus and other piscine vesiculo-like viruses using reverse hybridisation

Diseases of Aquatic Organisms

Volumn 76, Issue 2, 2007, Pages 163-168

  Sheppard, A M ^a   Le Deuff, R M ^a   Martin, P D ^a   Woolford, G ^a   Way, K ^a   Stone, D M ^a  

^a CENTRE FOR ENVIRONMENT   (United Kingdom)

Author keywords

Genotyping; Reverse hybridisation; Rhabdovirus; Spring viraemia of carp virus; SVCV; Vesiculovirus

Indexed keywords

ASSAY; CYPRINID; GENOTYPE; HYBRIDIZATION; MEMBRANE; PHYLOGENY; VIRUS;

CYPRINIDAE; PISCES; RHABDOVIRIDAE; SPRING VIREMIA OF CARP VIRUS; VESICULAR STOMATITIS VIRUS; VESICULOVIRUS;

GLYCOPROTEIN;

ANIMAL; ANIMAL DISEASE; ARTICLE; CARP; CHEMISTRY; DNA MICROARRAY; DNA PROBE; FISH DISEASE; GENETICS; GENOTYPE; METHODOLOGY; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PHYLOGENY; SENSITIVITY AND SPECIFICITY; VESICULAR STOMATITIS VIRUS; VIREMIA; VIROLOGY; VIRUS INFECTION;

ANIMALS; BASE SEQUENCE; CARPS; DNA PROBES; FISH DISEASES; GENOTYPE; GLYCOPROTEINS; MOLECULAR SEQUENCE DATA; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; PHYLOGENY; RHABDOVIRIDAE INFECTIONS; SENSITIVITY AND SPECIFICITY; VESICULOVIRUS; VIREMIA;

EID: 35448966208     PISSN: 01775103     EISSN: 16161580     Source Type: Journal    
DOI: 10.3354/dao076163     Document Type: Article

References (17)

1. Adair BM, McLoughlin M (1986) Isolation of pike fry rhabdovirus from brown trout (Salmo trutta). Bull Eur Assoc Fish Pathol 6:85-86
2. Ahne W, Mahnel H, Steinhagen P (1982) Isolation of pike fry rhabdovirus from tench, Tinea tinca L., and white bream, Blicca bjoerkna (L.). J Fish Dis 5:535-537
3. Ahne W, Kurath G, Winton J (1998) A ribonuclease protection assay can distinguish spring viraemia of carp virus from pike fry rhabdovirus. Bull Eur Assoc Fish Pathol 18: 220-224
4. De Kinkelin P, Galimard B, Bootsma R (1973) Isolation and identification of the causative agent of 'red disease' of pike (Esox lucius L., 1766). Nature 241:465-467
5. Dikkeboom A, Radi C, Toohey Kurth K, Marcquenski S and 5 others (2004) First report of spring viremia of carp virus in wUd North American common carp (Cyprinus carpio) from Cedar Lake, Wisconsin. J Aquat Health 16:169-178
6. Dixon PD, Longshaw CB (2005) Assessment of commercial test kits to identify spring viraemia of carp virus. Dis Aquat Org 67:25-29
7. Fijan N, Petrinec Z, Sulimanovic D, Zwillenberg LO (1971) Isolation of the viral causative agent from the acute form of infectious dropsy of carp. Vet Arch 41:125-138
8. Fijan N, Matasin Z, Jeney Z, Oláh J, Zwillenberg LO (1984) Isolation of Rhabdovirus carpio from sheatfish (Silurus glanis) fry. In: Olah J (ed) Fish, pathogens and environment in European polyculture. Akadémiai Kiadó, Budapest, p 17-24
9. Koutná M, Veselý T, Pšikal I, Hůlová J (2003) Identification of spring viraemia of carp virus (SVCV) by combined RT-PCR and nested PCR. Dis Aquat Org 55:229-235
10. Kumar S, Tamura K, Nei M (2004) MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinform 5:150-163
11. Oreshkova SF, Shchelkunov IS, Tikunova NV, Shchelkunova TI, Puzyrev AT, Ilyichev AA (1999) Detection of spring viraemia of carp virus isolates by hybridization with non-radioactive probes and amplification by polymerase chain reaction. Virus Res 63:3-10
12. Rowley H, Graham DA, Campbell S, Way K, Stone DM, Curran WL, Bryson DG (2001) Isolation and characterisation of rhabdovirus from wild common bream Abramis brama and roach Rutilis rutilis, farmed brown trout Salmo trutta and rainbow trout Oncorhynchus mykiss in Northern Ireland. Dis Aquat Org 48:7-15
13. Stone DM, Sheppard A, Lui CTY, Taylor GR, Denham K, Dixon PF, Way K (2003) Nucleotide sequence analysis of the glycoprotein gene of putative spring viraemia of carp virus and fry rhabdovirus isolates reveals four distinct piscine vesiculovirus groups. Dis Aquat Org 53:203-210
14. Strammen HK, Stone DM (1998) Detection of viral haemorrhagic septicaemia virus (VHS) in fish tissues by seminested polymerase chain reaction (PCR). In: Barnes A, Davidson G, Hiney M, Mcintosh D (eds) Proceedings of the symposium on methodology in fish disease research. Fisheries Research Services, Aberdeen, p 203-209
15. Thiery R, Arnauld C, Delsert C (1999) Two isolates of sea bass, Dicentrarchus labrax L, nervous necrosis virus with distinct genomes. J Fish Dis 22:201-207
16. Vestergård Jorgensen PE, Olesen NJ, Ahne W, Lorenzen N (1989) SVCV and PFR viruses: serological examination of 22 isolates indicates close relationship between the two fish rhabdoviruses. In: Ahne W, Kurstak E (eds) Viruses of lower vertebrates. Springer-Verlag, Berlin, p 349-366
17. Way K, Bark SJ, Longshaw CB, Denham KL and 8 others (2003) Isolation of a rhabdovirus during outbreaks of disease in cyprinid fish species at fishery sites in England. Dis Aquat Org 57(1/2):43-50