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Volumn 8, Issue , 2007, Pages

Expressed sequences tags of the anther smut fungus, Microbotryum violaceum, identify mating and pathogenicity genes

Author keywords

[No Author keywords available]

Indexed keywords

COMPLEMENTARY DNA; CONTIG; FUNGAL DNA; FUNGAL PROTEIN; PHEROMONE RECEPTOR;

EID: 35348835986     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-8-272     Document Type: Article
Times cited : (31)

References (47)
  • 1
    • 33646547584 scopus 로고    scopus 로고
    • Microbial ecology in the age of genomics and metagenomics: Concepts, tools, and recent advances
    • 10.1111/j.1365-294X.2006.02882.x 16689892
    • Xu J Microbial ecology in the age of genomics and metagenomics: concepts, tools, and recent advances Molecular Ecology 2006, 15:1713-1729. 10.1111/j.1365-294X.2006.02882.x 16689892
    • (2006) Molecular Ecology , vol.15 , pp. 1713-1729
    • Xu, J.1
  • 3
    • 0035162172 scopus 로고    scopus 로고
    • Identification of genes in the bW/bE regulatory cascade in Ustilago maydis
    • 10.1046/j.1365-2958.2001.02699.x 11737646
    • Brachmann A Weinzierl G Kamper J Kahmann R Identification of genes in the bW/bE regulatory cascade in Ustilago maydis Molecular Microbiology 2001, 42:1047-1063. 10.1046/j.1365-2958.2001.02699.x 11737646
    • (2001) Molecular Microbiology , vol.42 , pp. 1047-1063
    • Brachmann, A.1    Weinzierl, G.2    Kamper, J.3    Kahmann, R.4
  • 4
    • 8844219772 scopus 로고    scopus 로고
    • Regulation of mating and pathogenic development in Ustilago maydis
    • 10.1016/j.mib.2004.10.006 15556041
    • Feldbrugge M Kamper J Steinberg G Kahmann R Regulation of mating and pathogenic development in Ustilago maydis Current Opinion in Microbiology 2004, 7:666-672. 10.1016/j.mib.2004.10.006 15556041
    • (2004) Current Opinion in Microbiology , vol.7 , pp. 666-672
    • Feldbrugge, M.1    Kamper, J.2    Steinberg, G.3    Kahmann, R.4
  • 6
    • 0010912044 scopus 로고
    • Mating systems and evolution of the Basidiomycetes
    • Knoxville, TN., University of Tennessee Press Petersen RH
    • Raper JR Flexer AS Mating systems and evolution of the Basidiomycetes Evolution in the Higher Basidiomycetes Knoxville, TN., University of Tennessee Press Petersen RH 1971, 149-167/
    • (1971) Evolution in the Higher Basidiomycetes , pp. 149-167
    • Raper, J.R.1    Flexer, A.S.2
  • 7
    • 0028228510 scopus 로고
    • Linkage of mating-type loci distinguishes bipolar from tetrapolar mating in Basidiomycetous smut fungi
    • 10.1073/pnas.91.15.7085 7913746 44343
    • Bakkeren G Kronstad JW Linkage of mating-type loci distinguishes bipolar from tetrapolar mating in Basidiomycetous smut fungi Proc Natl Acad Sci U S A 1994, 91(15):7085-7089. 7089 10.1073/pnas.91.15.7085 7913746 44343
    • (1994) Proc Natl Acad Sci U S A , vol.91 , Issue.15 , pp. 7085-7089
    • Bakkeren, G.1    Kronstad, J.W.2
  • 8
    • 33645217329 scopus 로고    scopus 로고
    • Evolution of the bipolar mating system of the mushroom Coprinellus disseminatus from its tetrapolar ancestors involves loss of mating-type-specific pheromone receptor function
    • 1456265 16461425 10.1534/genetics.105.051128
    • James TY Srivilai P Kues U Vilgalys R Evolution of the bipolar mating system of the mushroom Coprinellus disseminatus from its tetrapolar ancestors involves loss of mating-type-specific pheromone receptor function Genetics 2006, 172:1877-1891. 1456265 16461425 10.1534/ genetics.105.051128
    • (2006) Genetics , vol.172 , pp. 1877-1891
    • James, T.Y.1    Srivilai, P.2    Kues, U.3    Vilgalys, R.4
  • 9
    • 0035527356 scopus 로고    scopus 로고
    • Analysis of character correlations among wood decay mechanisms, mating systems, and substrate ranges in homobasidiomycetes
    • 10.1080/10635150151125879 12116929
    • Hibbett DS Donoghue MJ Analysis of character correlations among wood decay mechanisms, mating systems, and substrate ranges in homobasidiomycetes Systematic Biology 2001, 50:215-242. 10.1080/ 10635150151125879 12116929
    • (2001) Systematic Biology , vol.50 , pp. 215-242
    • Hibbett, D.S.1    Donoghue, M.J.2
  • 10
    • 0027802216 scopus 로고
    • Plant-life history and disease susceptibility - The occurrence of Ustilago violacea on different species within the Caryophyllaceae
    • 10.2307/2261527
    • Thrall PH Biere A Antonovics J Plant-life history and disease susceptibility - the occurrence of Ustilago violacea on different species within the Caryophyllaceae Journal of Ecology 1993, 81:489-498. 10.2307/2261527
    • (1993) Journal of Ecology , vol.81 , pp. 489-498
    • Thrall, P.H.1    Biere, A.2    Antonovics, J.3
  • 11
    • 0002624763 scopus 로고
    • Mating type and morphogenesis in Ustilago violacea
    • 10.1086/337062
    • Day AW Mating type and morphogenesis in Ustilago violacea Bot Gaz 1979, 140:94-109. 10.1086/337062
    • (1979) Bot Gaz , vol.140 , pp. 94-109
    • Day, A.W.1
  • 12
    • 21044454492 scopus 로고    scopus 로고
    • Repetitive DNA in the automictic fungus Microbotryum violaceum
    • 10.1007/s10709-004-6615-y 16010998
    • Hood ME Repetitive DNA in the automictic fungus Microbotryum violaceum Genetica 2005, 124:1-10. 10.1007/s10709-004-6615-y 16010998
    • (2005) Genetica , vol.124 , pp. 1-10
    • Hood, M.E.1
  • 13
    • 0031979707 scopus 로고    scopus 로고
    • Isolation of a novel gene (HSGc11) whose expression is apparently limited to the hyphal stage of Microbotryum violaceum
    • 10.1086/297540
    • Wang L Perlin MH Isolation of a novel gene (HSGc11) whose expression is apparently limited to the hyphal stage of Microbotryum violaceum International Journal of Plant Sciences 1998, 159:206-212. 10.1086/297540
    • (1998) International Journal of Plant Sciences , vol.159 , pp. 206-212
    • Wang, L.1    Perlin, M.H.2
  • 14
    • 0041508131 scopus 로고    scopus 로고
    • Gene expression and EST analyses of Ustilago maydis germinating teliospores
    • 10.1016/S1087-1845(03)00078-1 12948513
    • Sacadura NT Saville BJ Gene expression and EST analyses of Ustilago maydis germinating teliospores Fungal Genet Biol 2003, 40(1):47-64. 10.1016/S1087-1845(03)00078-1 12948513
    • (2003) Fungal Genet Biol , vol.40 , Issue.1 , pp. 47-64
    • Sacadura, N.T.1    Saville, B.J.2
  • 16
    • 20444428334 scopus 로고    scopus 로고
    • Gene identification in the oomycete pathogen Phytophthora parasitica during in vitro vegetative growth through expressed sequence tags
    • 10.1016/j.fgb.2005.03.002 15950158
    • Panabieres F Amselem J Galiana E Le Berre JY Gene identification in the oomycete pathogen Phytophthora parasitica during in vitro vegetative growth through expressed sequence tags Fungal Genet Biol 2005, 42:611-623. 10.1016/j.fgb.2005.03.002 15950158
    • (2005) Fungal Genet Biol , vol.42 , pp. 611-623
    • Panabieres, F.1    Amselem, J.2    Galiana, E.3    Le Berre, J.Y.4
  • 17
    • 28844492079 scopus 로고    scopus 로고
    • Genomics of the fungal kingdom: Insights into eukaryotic biology
    • 10.1101/gr.3767105 16339359
    • Galagan JE Henn MR Ma LJ Cuomo CA Birren B Genomics of the fungal kingdom: Insights into eukaryotic biology Genome Research 2005, 15:1620-1631. 10.1101/gr.3767105 16339359
    • (2005) Genome Research , vol.15 , pp. 1620-1631
    • Galagan, J.E.1    Henn, M.R.2    Ma, L.J.3    Cuomo, C.A.4    Birren, B.5
  • 19
    • 0034894633 scopus 로고    scopus 로고
    • Gene information for fungal plant pathogens from expressed sequences
    • 10.1016/S1369-5274(00)00221-6 11495798
    • Skinner W Keon J Hargreaves J Gene information for fungal plant pathogens from expressed sequences Current Opinion in Microbiology 2001, 4:381-386. 10.1016/S1369-5274(00)00221-6 11495798
    • (2001) Current Opinion in Microbiology , vol.4 , pp. 381-386
    • Skinner, W.1    Keon, J.2    Hargreaves, J.3
  • 20
    • 0029937938 scopus 로고    scopus 로고
    • The pheromone response factor coordinates filamentous growth and pathogenicity in Ustilago maydis
    • 450074 8612587
    • Hartmann HA Kahmann R Bolker M The pheromone response factor coordinates filamentous growth and pathogenicity in Ustilago maydis Embo Journal 1996, 15:1632-1641. 450074 8612587
    • (1996) Embo Journal , vol.15 , pp. 1632-1641
    • Hartmann, H.A.1    Kahmann, R.2    Bolker, M.3
  • 22
    • 0034856595 scopus 로고    scopus 로고
    • Changes in mate recognition through alterations of pheromones and receptors in the multisexual mushroom fungus Schizophyllum commune
    • 1461750 11514441
    • Fowler TJ Mitton MF Vaillancourt LJ Raper CA Changes in mate recognition through alterations of pheromones and receptors in the multisexual mushroom fungus Schizophyllum commune Genetics 2001, 158:1491-1503. 1461750 11514441
    • (2001) Genetics , vol.158 , pp. 1491-1503
    • Fowler, T.J.1    Mitton, M.F.2    Vaillancourt, L.J.3    Raper, C.A.4
  • 23
    • 0034090229 scopus 로고    scopus 로고
    • Three subfamilies of pheromone and receptor genes generate multiple B mating specificities in the mushroom Coprinus cinereus
    • 1460978 10757757
    • Halsall JR Milner MJ Casselton LA Three subfamilies of pheromone and receptor genes generate multiple B mating specificities in the mushroom Coprinus cinereus Genetics 2000, 154:1115-1123. 1460978 10757757
    • (2000) Genetics , vol.154 , pp. 1115-1123
    • Halsall, J.R.1    Milner, M.J.2    Casselton, L.A.3
  • 25
    • 5144224453 scopus 로고    scopus 로고
    • Shared forces of sex chromosome evolution in haploid-mating and diploid-mating organisms: Microbotryum violaceum and other model organisms
    • 1448122 15454533 10.1534/genetics.104.029900
    • Hood ME Antonovics J Koskella B Shared forces of sex chromosome evolution in haploid-mating and diploid-mating organisms: Microbotryum violaceum and other model organisms Genetics 2004, 168:141-146. 1448122 15454533 10.1534/genetics.104.029900
    • (2004) Genetics , vol.168 , pp. 141-146
    • Hood, M.E.1    Antonovics, J.2    Koskella, B.3
  • 26
    • 84864707334 scopus 로고    scopus 로고
    • Intracellular enzymes and metabolites involved in pathogenesis of Botrytis
    • Kluwer Academic Publisher Elad Y, Williamson B, Tudzynski P and Delen N
    • Kars I van Kan JAL Intracellular enzymes and metabolites involved in pathogenesis of Botrytis Botrytis: Biology, Pathology and Control, Kluwer Academic Publisher Elad Y, Williamson B, Tudzynski P and Delen N 2004.
    • (2004) Botrytis: Biology, Pathology and Control
    • Kars, I.1    van Kan, J.A.L.2
  • 28
    • 0242658632 scopus 로고    scopus 로고
    • Of smuts, blasts, mildews, and blights: Camp signaling in phytopathogenic fungi
    • 10.1146/annurev.phyto.41.052002.095728 12651963
    • Lee N D'Souza CA Kronstad JW Of smuts, blasts, mildews, and blights: cAMP signaling in phytopathogenic fungi Annu Rev Phytopathol 2003, 41:399-427. 10.1146/annurev.phyto.41.052002.095728 12651963
    • (2003) Annu Rev Phytopathol , vol.41 , pp. 399-427
    • Lee, N.1    D'Souza, C.A.2    Kronstad, J.W.3
  • 29
    • 0038185256 scopus 로고    scopus 로고
    • ras2 Controls morphogenesis, pheromone response, and pathogenicity in the fungal pathogen Ustilago maydis
    • 138767 12477796 10.1128/EC.1.6.954-966.2002
    • Lee N Kronstad JW ras2 Controls morphogenesis, pheromone response, and pathogenicity in the fungal pathogen Ustilago maydis Eukaryotic Cell 2002, 1:954-966. 138767 12477796 10.1128/EC.1.6.954-966.2002
    • (2002) Eukaryotic Cell , vol.1 , pp. 954-966
    • Lee, N.1    Kronstad, J.W.2
  • 30
    • 0347517771 scopus 로고    scopus 로고
    • Cyclophilin A and calcineurin functions investigated by gene inactivation, cyclosporin A inhibition and cDNA arrays approaches in the phytopathogenic fungus Botrytis cinerea
    • 10.1046/j.1365-2958.2003.03798.x 14651630
    • Viaud M Brunet-Simon A Brygoo Y Pradier JM Levis C Cyclophilin A and calcineurin functions investigated by gene inactivation, cyclosporin A inhibition and cDNA arrays approaches in the phytopathogenic fungus Botrytis cinerea Molecular Microbiology 2003, 50:1451-1465. 10.1046/ j.1365-2958.2003.03798.x 14651630
    • (2003) Molecular Microbiology , vol.50 , pp. 1451-1465
    • Viaud, M.1    Brunet-Simon, A.2    Brygoo, Y.3    Pradier, J.M.4    Levis, C.5
  • 32
    • 23344431640 scopus 로고    scopus 로고
    • Repeat-induced point mutation and the population structure of transposable elements in Microbotryum violaceum
    • 1451165 15911572 10.1534/genetics.105.042564
    • Hood ME Katawczik M Giraud T Repeat-induced point mutation and the population structure of transposable elements in Microbotryum violaceum Genetics 2005, 170:1081-1089. 1451165 15911572 10.1534/ genetics.105.042564
    • (2005) Genetics , vol.170 , pp. 1081-1089
    • Hood, M.E.1    Katawczik, M.2    Giraud, T.3
  • 33
    • 0032427551 scopus 로고    scopus 로고
    • Genetics of Ustilago violacea. XXXIV. Genetic evidence for a transposable element functioning during mitosis and two transposable elements functioning during meiosis
    • Garber ED Ruddat M Genetics of Ustilago violacea. XXXIV. Genetic evidence for a transposable element functioning during mitosis and two transposable elements functioning during meiosis International Journal of Plant Sciences 1998, 159:1018-1022. 10.1086/297623
    • (1998) International Journal of Plant Sciences , vol.159 , pp. 1018-1022
    • Garber, E.D.1    Ruddat, M.2
  • 34
    • 0037172977 scopus 로고    scopus 로고
    • A cytosine methyltransferase homologue is essential for repeat-induced point mutation in Neurospora crassa
    • 10.1073/pnas.132212899 12072568 124379
    • Freitag M Williams RL Kothe GO Selker EU A cytosine methyltransferase homologue is essential for repeat-induced point mutation in Neurospora crassa Proc Natl Acad Sci U S A 2002, 99:8802-8807. 10.1073/ pnas.132212899 12072568 124379
    • (2002) Proc Natl Acad Sci U S A , vol.99 , pp. 8802-8807
    • Freitag, M.1    Williams, R.L.2    Kothe, G.O.3    Selker, E.U.4
  • 35
    • 33748951972 scopus 로고    scopus 로고
    • The dawn of fungal pathogen genomics
    • 10.1146/annurev.phyto.44.070505.143412 16704358
    • Xu JR Peng YL Dickman MB Sharon A The dawn of fungal pathogen genomics Annu Rev Phytopathol 2006, 44:337-366. 10.1146/ annurev.phyto.44.070505.143412 16704358
    • (2006) Annu Rev Phytopathol , vol.44 , pp. 337-366
    • Xu, J.R.1    Peng, Y.L.2    Dickman, M.B.3    Sharon, A.4
  • 36
    • 0041976130 scopus 로고    scopus 로고
    • Sex-ratio bias in populations of the phytopathogenic fungus Microbotryum violaceum from several host species
    • 10.1086/375374
    • Thomas A Shykoff J Jonot O Giraud T Sex-ratio bias in populations of the phytopathogenic fungus Microbotryum violaceum from several host species International Journal of Plant Sciences 2003, 164:641-647. 10.1086/375374
    • (2003) International Journal of Plant Sciences , vol.164 , pp. 641-647
    • Thomas, A.1    Shykoff, J.2    Jonot, O.3    Giraud, T.4
  • 37
    • 85012694349 scopus 로고
    • Ustilago violacea, anther smut of the Caryophyllaceae
    • Day AW Garber ED Ustilago violacea, anther smut of the Caryophyllaceae Advances in Plant Pathology 1988, 6:457-482.
    • (1988) Advances in Plant Pathology , vol.6 , pp. 457-482
    • Day, A.W.1    Garber, E.D.2
  • 38
    • 0031978181 scopus 로고    scopus 로고
    • Base-calling of automated sequencer traces using phred. II. Error probabilities
    • 9521922
    • Ewing B Green P Base-calling of automated sequencer traces using phred. II. Error probabilities Genome Research 1998, 8:186-194. 9521922
    • (1998) Genome Research , vol.8 , pp. 186-194
    • Ewing, B.1    Green, P.2
  • 39
    • 0031955518 scopus 로고    scopus 로고
    • Base-calling of automated sequencer traces using phred. I. Accuracy assessment
    • 9521921
    • Ewing B Hillier L Wendl MC P. G Base-calling of automated sequencer traces using phred. I. Accuracy assessment. Genome Research 1998, 8:175-185. 9521921
    • (1998) Genome Research , vol.8 , pp. 175-185
    • Ewing, B.1    Hillier, L.2    MC Wendl P3
  • 40
    • 0032849859 scopus 로고    scopus 로고
    • CAP3: A DNA Sequence Assembly Program
    • 310812 10508846 10.1101/gr.9.9.868
    • Huang X Madan A CAP3: A DNA Sequence Assembly Program Genome Res 1999, 9:868-877. 310812 10508846 10.1101/gr.9.9.868
    • (1999) Genome Res , vol.9 , pp. 868-877
    • Huang, X.1    Madan, A.2
  • 43
    • 24644503098 scopus 로고    scopus 로고
    • Blast2GO: A universal tool for annotation, visualization and analysis in functional genomics research
    • 10.1093/bioinformatics/bti610 16081474
    • Conesa A Gotz S Garcia-Gomez JM Terol J Talon M Robles M Blast2GO: A universal tool for annotation, visualization and analysis in functional genomics research Bioinformatics 2005, 21:3674-3676. 10.1093/ bioinformatics/bti610 16081474
    • (2005) Bioinformatics , vol.21 , pp. 3674-3676
    • Conesa, A.1    Gotz, S.2    Garcia-Gomez, J.M.3    Terol, J.4    Talon, M.5    Robles, M.6
  • 44
  • 45
    • 34547560275 scopus 로고    scopus 로고
    • WoLF PSORT: Protein localization predictor
    • 1933216 17517783 10.1093/nar/gkm259
    • Horton P Park KJ Obayashi T Nakai K WoLF PSORT: Protein localization predictor Nucleic Acids Res 2007, 35 Web Server issue):W585-7. 1933216 17517783 10.1093/nar/gkm259
    • (2007) Nucleic Acids Res , vol.35
    • Horton, P.1    Park, K.J.2    Obayashi, T.3    Nakai, K.4
  • 46
    • 13244287831 scopus 로고    scopus 로고
    • ESTIMA, a tool for EST management in a multi-project environment
    • 533868 15527510 10.1186/1471-2105-5-176
    • Kumar CG LeDuc R Gong G Roinishivili L Lewin HA Liu L ESTIMA, a tool for EST management in a multi-project environment BMC Bioinformatics 2004, 5:176-187. 533868 15527510 10.1186/1471-2105-5-176
    • (2004) BMC Bioinformatics , vol.5 , pp. 176-187
    • Kumar, C.G.1    LeDuc, R.2    Gong, G.3    Roinishivili, L.4    Lewin, H.A.5    Liu, L.6
  • 47
    • 0035076088 scopus 로고    scopus 로고
    • Differences in population structure of the anther smut fungus Microbotryum violaceum on two closely related host species, Silene latifolia and S. dioica
    • Bucheli E Gautschi B Shykoff JA Differences in population structure of the anther smut fungus Microbotryum violaceum on two closely related host species, Silene latifolia and S. dioica Molecular Ecology 2001, 10:285-294. 10.1046/j.1365-294x.2001.01146.x 11298945
    • (2001) Molecular Ecology , vol.10 , pp. 285-294
    • Bucheli, E.1    Gautschi, B.2    Shykoff, J.A.3


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