메뉴 건너뛰기




Volumn 2697, Issue , 2003, Pages 537-547

Genomic distances under deletions and insertions

Author keywords

Genomic distance; Hannenhalli Pevzner; Inversion distance; Reversal distance

Indexed keywords


EID: 35248897530     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/3-540-45071-8_54     Document Type: Article
Times cited : (15)

References (16)
  • 1
    • 0034767147 scopus 로고    scopus 로고
    • A fast linear-time algorithm for inversion distance with an experimental comparison
    • D.A. Bader, B.M.E. Moret, and M. Yan. A fast linear-time algorithm for inversion distance with an experimental comparison. J. Comput. Biol., 8(5):483-491, 2001.
    • (2001) J. Comput. Biol. , vol.8 , Issue.5 , pp. 483-491
    • Bader, D.A.1    Moret, B.M.E.2    Yan, M.3
  • 4
    • 0032635206 scopus 로고    scopus 로고
    • Formulations and hardness of multiple sorting by reversals
    • ACM Press
    • A. Caprara. Formulations and hardness of multiple sorting by reversals. In Proc. 3rd Int'l Conf. on Comput. Mol. Biol. RECOMB99, pages 84-93. ACM Press, 1999.
    • (1999) Proc. 3rd Int'l Conf. on Comput. Mol. Biol. RECOMB99 , pp. 84-93
    • Caprara, A.1
  • 5
    • 84959064166 scopus 로고    scopus 로고
    • On the practical solution of the reversal median problem
    • Proc. 1st Workshop on Algs. in Bioinformatics WABI 2001, Springer-Verlag
    • A. Caprara. On the practical solution of the reversal median problem. In Proc. 1st Workshop on Algs. in Bioinformatics WABI 2001, volume 2149 of Lecture Notes in Computer Science, pages 238-251. Springer-Verlag, 2001.
    • (2001) Lecture Notes in Computer Science , vol.2149 , pp. 238-251
    • Caprara, A.1
  • 6
    • 0001800180 scopus 로고    scopus 로고
    • An empirical comparison of phylogenetic methods on chloroplast gene order data in Campanulaceae
    • D. Sankoff and J. Nadeau, editors, Kluwer Acad. Pubs.
    • M. Cosner, R. Jansen, B.M.E. Moret, L. Raubeson, L. Wang, T. Warnow, and S. Wyman. An empirical comparison of phylogenetic methods on chloroplast gene order data in Campanulaceae. In D. Sankoff and J. Nadeau, editors, Comparative Genomics, pages 99-122. Kluwer Acad. Pubs., 2000.
    • (2000) Comparative Genomics , pp. 99-122
    • Cosner, M.1    Jansen, R.2    Moret, B.M.E.3    Raubeson, L.4    Wang, L.5    Warnow, T.6    Wyman, S.7
  • 7
    • 0002110604 scopus 로고
    • Use of chloroplast DNA rearrangements in reconstructing plant phytogeny
    • P. Soltis, D. Soltis, and J. Doyle, editors, Chapman and Hall
    • S. Downie and J. Palmer. Use of chloroplast DNA rearrangements in reconstructing plant phytogeny. In P. Soltis, D. Soltis, and J. Doyle, editors, Plant Molecular Systematics, pages 14-35. Chapman and Hall, 1992.
    • (1992) Plant Molecular Systematics , pp. 14-35
    • Downie, S.1    Palmer, J.2
  • 8
    • 84937391540 scopus 로고    scopus 로고
    • Genome rearrangement by reversals and insertions/deletions of contiguous segments
    • Proc. 11th Ann. Symp. Combin. Pattern Matching CPM 00, Springer-Verlag
    • N. El-Mabrouk. Genome rearrangement by reversals and insertions/deletions of contiguous segments. In Proc. 11th Ann. Symp. Combin. Pattern Matching CPM 00, volume 1848 of Lecture Notes in Computer Science, pages 222-234. Springer-Verlag, 2000.
    • (2000) Lecture Notes in Computer Science , vol.1848 , pp. 222-234
    • El-Mabrouk, N.1
  • 9
    • 0001807019 scopus 로고
    • Transforming cabbage into turnip (polynomial algorithm for sorting signed permutations by reversals)
    • ACM Press
    • S. Hannenhalli and P. Pevzner. Transforming cabbage into turnip (polynomial algorithm for sorting signed permutations by reversals). In Proc. 27th Ann. Symp. Theory of Computing STOC 95, pages 178-189. ACM Press, 1995.
    • (1995) Proc. 27th Ann. Symp. Theory of Computing STOC 95 , pp. 178-189
    • Hannenhalli, S.1    Pevzner, P.2
  • 10
    • 84957042462 scopus 로고    scopus 로고
    • Inversion medians outperform breakpoint medians in phylogeny reconstruction from gene-order data
    • R. Guigo and D. Gusfield, editors, Proc. 2nd Int'l Workshop Algorithms in Bioinformatics (WABI'02), Springer-Verlag
    • B.M.E. Moret, A.C. Siepel, J. Tang, and T. Liu. Inversion medians outperform breakpoint medians in phylogeny reconstruction from gene-order data. In R. Guigo and D. Gusfield, editors, Proc. 2nd Int'l Workshop Algorithms in Bioinformatics (WABI'02), volume 2452 of Lecture Notes in Computer Science, pages 521-536. Springer-Verlag, 2002.
    • (2002) Lecture Notes in Computer Science , vol.2452 , pp. 521-536
    • Moret, B.M.E.1    Siepel, A.C.2    Tang, J.3    Liu, T.4
  • 11
    • 0028005619 scopus 로고
    • Chloroplast DNA systematics: A review of methods and data analysis
    • R. Olmstead and J. Palmer. Chloroplast DNA systematics: a review of methods and data analysis. Amer. J. Bot., 81:1205-1224, 1994.
    • (1994) Amer. J. Bot. , vol.81 , pp. 1205-1224
    • Olmstead, R.1    Palmer, J.2
  • 12
    • 0002880994 scopus 로고
    • Chloroplast and mitochondrial genome evolution in land plants
    • R. Herrmann, editor, Springer Verlag
    • J. Palmer. Chloroplast and mitochondrial genome evolution in land plants. In R. Herrmann, editor, Cell Organelles, pages 99-133. Springer Verlag, 1992.
    • (1992) Cell Organelles , pp. 99-133
    • Palmer, J.1
  • 14
    • 0026598577 scopus 로고
    • Chloroplast DNA evidence on the ancient evolutionary split in vascular land plants
    • L. Raubeson and R. Jansen. Chloroplast DNA evidence on the ancient evolutionary split in vascular land plants. Science, 255:1697-1699, 1992.
    • (1992) Science , vol.255 , pp. 1697-1699
    • Raubeson, L.1    Jansen, R.2
  • 15
    • 0033391532 scopus 로고    scopus 로고
    • Genome rearrangement with gene families
    • D. Sankoff. Genome rearrangement with gene families. Bioinformatics, 15(11):909-917, 1999.
    • (1999) Bioinformatics , vol.15 , Issue.11 , pp. 909-917
    • Sankoff, D.1
  • 16
    • 84959066123 scopus 로고    scopus 로고
    • Finding an optimal inversion median: Experimental results
    • O. Gascuel and B.M.E. Moret, editors, Proc. 1st Int'l Workshop Algorithms in Bioinformatics (WABI'01), Springer-Verlag
    • A.C. Siepel and B.M.E. Moret. Finding an optimal inversion median: Experimental results. In O. Gascuel and B.M.E. Moret, editors, Proc. 1st Int'l Workshop Algorithms in Bioinformatics (WABI'01), volume 2149 of Lecture Notes in Computer Science, pages 189-203. Springer-Verlag, 2001.
    • (2001) Lecture Notes in Computer Science , vol.2149 , pp. 189-203
    • Siepel, A.C.1    Moret, B.M.E.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.