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Volumn 2812, Issue , 2003, Pages 374-388

Speedup LP approach to protein threading via graph reduction

Author keywords

[No Author keywords available]

Indexed keywords

COMPUTER PROGRAMMING; LINEAR PROGRAMMING; PROTEINS;

EID: 35248857063     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/978-3-540-39763-2_27     Document Type: Article
Times cited : (5)

References (12)
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    • D. Fischer. http://www.cs.bgu.ac.il/∼dfischer/CAFASP3/, December 2002.
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    • Fischer, D.1
  • 4
    • 0028015988 scopus 로고
    • The protein threading problem with sequence amino acid interaction preferences is NP-complete
    • R.H. Lathrop. The protein threading problem with sequence amino acid interaction preferences is NP-complete. Protein Engineering, 7:1059-1068, 1994.
    • (1994) Protein Engineering , vol.7 , pp. 1059-1068
    • Lathrop, R.H.1
  • 5
    • 0027050011 scopus 로고
    • Sequence-structure matching in globular proteins: Application to supersecondary and tertiary structure determination
    • A. Godzik and J. Skolnick. Sequence-structure matching in globular proteins: application to supersecondary and tertiary structure determination. PNAS, 89:12098-12102, 1992.
    • (1992) PNAS , vol.89 , pp. 12098-12102
    • Godzik, A.1    Skolnick, J.2
  • 6
    • 0027318317 scopus 로고
    • An empirical energy function for threading protein sequence through folding motif
    • S.H. Bryant and C.E. Lawrence. An empirical energy function for threading protein sequence through folding motif. Proteins: Structure, Function and Genetics, 16:92-112, 1993.
    • (1993) Proteins: Structure, Function and Genetics , vol.16 , pp. 92-112
    • Bryant, S.H.1    Lawrence, C.E.2
  • 7
    • 0031750906 scopus 로고    scopus 로고
    • An efficient computational method for globally optimal threadings
    • Y. Xu, D. Xu, and E.C. Uberbacher. An efficient computational method for globally optimal threadings. Journal of Computational Biology, 5(3):597-614, 1998.
    • (1998) Journal of Computational Biology , vol.5 , Issue.3 , pp. 597-614
    • Xu, Y.1    Xu, D.2    Uberbacher, E.C.3
  • 8
    • 0029912991 scopus 로고    scopus 로고
    • Global optimum protein threading with gapped alignment and empirical pair score functions
    • R.H. Lathrop and T.F. Smith. Global optimum protein threading with gapped alignment and empirical pair score functions. Journal of Molecular Biology, 255:641-665, 1996.
    • (1996) Journal of Molecular Biology , vol.255 , pp. 641-665
    • Lathrop, R.H.1    Smith, T.F.2
  • 11
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    • December
    • CASP5. http://predictioncenter.llnl.gov/casp5/Casp5.html, December 2002.
    • (2002)
  • 12
    • 35248882100 scopus 로고    scopus 로고
    • L. Rychlewski. http://www.bioinfo.pl/livebench/6, 2002.
    • (2002)
    • Rychlewski, L.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.