-
1
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
-
Altschul S.F., Madden T.L., Schäfeer A.A., Zhang J., Zhang Z., Miller W., and Lipman D.J. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25 (1997) 3389-3402
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schäfeer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
2
-
-
4444289448
-
Bacterial communities and enzyme activities of PAHs polluted soils
-
Andreoni V., Cavalca L., Rao M.A., Nocerino G., Bernasconi S., Dell'Amico E., Colombo M., and Gianfreda L. Bacterial communities and enzyme activities of PAHs polluted soils. Chemosphere 57 (2004) 401-412
-
(2004)
Chemosphere
, vol.57
, pp. 401-412
-
-
Andreoni, V.1
Cavalca, L.2
Rao, M.A.3
Nocerino, G.4
Bernasconi, S.5
Dell'Amico, E.6
Colombo, M.7
Gianfreda, L.8
-
3
-
-
0001479074
-
Biodegradation of oil and bioremediation of oil spills
-
Atlas R.M., and Atlas M.C. Biodegradation of oil and bioremediation of oil spills. Curr. Opin. Biotechnol. 2 (1991) 440-443
-
(1991)
Curr. Opin. Biotechnol.
, vol.2
, pp. 440-443
-
-
Atlas, R.M.1
Atlas, M.C.2
-
4
-
-
0002974956
-
Bioremediation
-
Demain A.L., and Davies J.E. (Eds), ASM Press, Washington, DC
-
Atlas R.M., and Unterman R. Bioremediation. In: Demain A.L., and Davies J.E. (Eds). Manual of Industrial Microbiology and Biotechnology. second ed. (1999), ASM Press, Washington, DC 666-681
-
(1999)
Manual of Industrial Microbiology and Biotechnology. second ed.
, pp. 666-681
-
-
Atlas, R.M.1
Unterman, R.2
-
5
-
-
0033002799
-
About the order in the aerobic heterotrophic microbial communities from hydrocarbon-contaminated sites
-
Becker P.M. About the order in the aerobic heterotrophic microbial communities from hydrocarbon-contaminated sites. Int. Biodeterior. Biodegrad. 43 (1999) 135-146
-
(1999)
Int. Biodeterior. Biodegrad.
, vol.43
, pp. 135-146
-
-
Becker, P.M.1
-
6
-
-
12844274394
-
Comparative bioremediation of soils contaminated with diesel oil by natural attenuation, biostimulation and bioaugmentation
-
Bento F.M., Camargo F.A., Okeke B.C., and Frankenberger W.T. Comparative bioremediation of soils contaminated with diesel oil by natural attenuation, biostimulation and bioaugmentation. Bioresour. Technol. 96 (2005) 1049-1055
-
(2005)
Bioresour. Technol.
, vol.96
, pp. 1049-1055
-
-
Bento, F.M.1
Camargo, F.A.2
Okeke, B.C.3
Frankenberger, W.T.4
-
7
-
-
0028183819
-
Effectiveness of bioremediation for the Exxon Valdez oil spill
-
Bragg J.R., Prince R.C., Harner E.J., and Atlas R.M. Effectiveness of bioremediation for the Exxon Valdez oil spill. Nature 368 (1994) 413-418
-
(1994)
Nature
, vol.368
, pp. 413-418
-
-
Bragg, J.R.1
Prince, R.C.2
Harner, E.J.3
Atlas, R.M.4
-
8
-
-
0026808684
-
Amplification of DNA from native populations of soil bacteria by using the polymerase chain reaction
-
Bruce K.D., Hiorns W.D., Hobman J.L., Osborn A.M., Strike P., and Ritchie D.A. Amplification of DNA from native populations of soil bacteria by using the polymerase chain reaction. Appl. Environ. Microbiol. 58 (1992) 3413-3423
-
(1992)
Appl. Environ. Microbiol.
, vol.58
, pp. 3413-3423
-
-
Bruce, K.D.1
Hiorns, W.D.2
Hobman, J.L.3
Osborn, A.M.4
Strike, P.5
Ritchie, D.A.6
-
9
-
-
0036165908
-
Microbial communities in different soil types do not converge after diesel contamination
-
Bundy J.G., Paton G.I., and Campbell C.D. Microbial communities in different soil types do not converge after diesel contamination. J. Appl. Microbiol. 92 (2002) 276-288
-
(2002)
J. Appl. Microbiol.
, vol.92
, pp. 276-288
-
-
Bundy, J.G.1
Paton, G.I.2
Campbell, C.D.3
-
10
-
-
13944264742
-
Accessing microbial diversity for bioremediation and environmental restoration
-
Debarati P., Pandey G., Pandey J., and Jain R.K. Accessing microbial diversity for bioremediation and environmental restoration. Trends Biotechnol. 23 (2005) 135-142
-
(2005)
Trends Biotechnol.
, vol.23
, pp. 135-142
-
-
Debarati, P.1
Pandey, G.2
Pandey, J.3
Jain, R.K.4
-
11
-
-
23944521515
-
The Prestige oil spill. I., Biodegradation of a heavy fuel oil under simulated conditions
-
Diez S., Sabatte J., Vinas M., Bayona J.M., Solanas A.M., and Albaiges J. The Prestige oil spill. I., Biodegradation of a heavy fuel oil under simulated conditions. Environ. Toxicol. Chem. 24 (2005) 2203-2217
-
(2005)
Environ. Toxicol. Chem.
, vol.24
, pp. 2203-2217
-
-
Diez, S.1
Sabatte, J.2
Vinas, M.3
Bayona, J.M.4
Solanas, A.M.5
Albaiges, J.6
-
13
-
-
23644449733
-
Aromatic and aliphatic hydrocarbon consumption and transformation by the styrene degrading strain Pseudomonas putida CA-3
-
Dunn H.D., Curtin T., O'Riordan M.A., Coen P., Kieran P.M., Malone D.M., and O'Connor K.E. Aromatic and aliphatic hydrocarbon consumption and transformation by the styrene degrading strain Pseudomonas putida CA-3. FEMS Microbiol. Lett. 249 (2005) 267-273
-
(2005)
FEMS Microbiol. Lett.
, vol.249
, pp. 267-273
-
-
Dunn, H.D.1
Curtin, T.2
O'Riordan, M.A.3
Coen, P.4
Kieran, P.M.5
Malone, D.M.6
O'Connor, K.E.7
-
14
-
-
3142776638
-
Impact of oil contamination and biostimulation on the diversity of indigenous bacterial communities in soil microcosms
-
Evans F.F., Rosado A.S., Sebastián G.V., Casella R., Machado P.L.O.A., Holmström C., Kjelleberg S., van Elsas J.D., and Seldin L. Impact of oil contamination and biostimulation on the diversity of indigenous bacterial communities in soil microcosms. FEMS Microbiol. Ecol. 49 (2004) 295-305
-
(2004)
FEMS Microbiol. Ecol.
, vol.49
, pp. 295-305
-
-
Evans, F.F.1
Rosado, A.S.2
Sebastián, G.V.3
Casella, R.4
Machado, P.L.O.A.5
Holmström, C.6
Kjelleberg, S.7
van Elsas, J.D.8
Seldin, L.9
-
15
-
-
32944461155
-
Environmental features of two commercial surfactants widely used in soil remediation
-
Franzetti A., Di Gennaro P., Bevilacqua A., Pappacchini M., and Bestetti G. Environmental features of two commercial surfactants widely used in soil remediation. Chemosphere 62 (2006) 1474-1480
-
(2006)
Chemosphere
, vol.62
, pp. 1474-1480
-
-
Franzetti, A.1
Di Gennaro, P.2
Bevilacqua, A.3
Pappacchini, M.4
Bestetti, G.5
-
16
-
-
12144287538
-
Application of a vital fluorescent staining method for simultaneous, near-real-time concentration monitoring of two bacterial strains in an Atlantic coastal plain aquifer in Oyster, Virginia
-
Fuller M.E., Mailloux B.J., Streger S.H., Hall J.A., Zhang P., Kovacik W.P., Vainberg S., Johnson W.P., Onstott T.C., and DeFlaun M.F. Application of a vital fluorescent staining method for simultaneous, near-real-time concentration monitoring of two bacterial strains in an Atlantic coastal plain aquifer in Oyster, Virginia. Appl. Environ. Microbiol. 70 (2004) 1680-1687
-
(2004)
Appl. Environ. Microbiol.
, vol.70
, pp. 1680-1687
-
-
Fuller, M.E.1
Mailloux, B.J.2
Streger, S.H.3
Hall, J.A.4
Zhang, P.5
Kovacik, W.P.6
Vainberg, S.7
Johnson, W.P.8
Onstott, T.C.9
DeFlaun, M.F.10
-
17
-
-
0037408218
-
'Super bugs' for bioremediation
-
Furukawa K. 'Super bugs' for bioremediation. Trends Biotechnol. 21 (2003) 187-190
-
(2003)
Trends Biotechnol.
, vol.21
, pp. 187-190
-
-
Furukawa, K.1
-
18
-
-
0035528843
-
Bioremediation of diesel-contaminated soils: evaluation of potential in situ techniques by study of bacterial degradation
-
Gallego J.R., Loredo J., Llamas J.F., Vázquez F., and Sánchez J. Bioremediation of diesel-contaminated soils: evaluation of potential in situ techniques by study of bacterial degradation. Biodegradation 12 (2001) 325-335
-
(2001)
Biodegradation
, vol.12
, pp. 325-335
-
-
Gallego, J.R.1
Loredo, J.2
Llamas, J.F.3
Vázquez, F.4
Sánchez, J.5
-
19
-
-
35248816756
-
Oleophilic fertilizers and bioremediation: a new perspective
-
Wiley-VCH
-
Gallego J.R., Menéndez-Vega D., Sánchez J., García-Martínez M.J., and Llamas J.F. Oleophilic fertilizers and bioremediation: a new perspective. Recent Research Developments in Multidisciplinary Applied Microbiology (2005), Wiley-VCH
-
(2005)
Recent Research Developments in Multidisciplinary Applied Microbiology
-
-
Gallego, J.R.1
Menéndez-Vega, D.2
Sánchez, J.3
García-Martínez, M.J.4
Llamas, J.F.5
-
21
-
-
0031930660
-
Bioremediation: towards a credible technology
-
Head I.M. Bioremediation: towards a credible technology. Microbiology 114 (1998) 599-608
-
(1998)
Microbiology
, vol.114
, pp. 599-608
-
-
Head, I.M.1
-
22
-
-
0034799122
-
Isolation and characterization of Achromobacter xylosoxidans T7 capable of degrading toluidine isomers
-
Hinteregger C., and Streichsbier F. Isolation and characterization of Achromobacter xylosoxidans T7 capable of degrading toluidine isomers. J. Basic Microbiol. 41 (2001) 159-170
-
(2001)
J. Basic Microbiol.
, vol.41
, pp. 159-170
-
-
Hinteregger, C.1
Streichsbier, F.2
-
23
-
-
0036203395
-
Rapid assessment of the physiological status of the polychlorinated biphenyl degrader Comamonas testosteroni TK102 by flow cytometry
-
Hiraoka Y., and Kimbara K. Rapid assessment of the physiological status of the polychlorinated biphenyl degrader Comamonas testosteroni TK102 by flow cytometry. Appl. Environ. Microbiol. 68 (2002) 2031-2035
-
(2002)
Appl. Environ. Microbiol.
, vol.68
, pp. 2031-2035
-
-
Hiraoka, Y.1
Kimbara, K.2
-
24
-
-
0037346720
-
A comparative study of carboxyfluorescein diacetate and carboxyfluorescein diacetate succinimidyl ester as indicators of bacterial activity
-
Hoefel D., Grooby W.L., Monis P.T., Andrews S., and Saint C.P. A comparative study of carboxyfluorescein diacetate and carboxyfluorescein diacetate succinimidyl ester as indicators of bacterial activity. J. Microbiol. Methods 52 (2003) 379-388
-
(2003)
J. Microbiol. Methods
, vol.52
, pp. 379-388
-
-
Hoefel, D.1
Grooby, W.L.2
Monis, P.T.3
Andrews, S.4
Saint, C.P.5
-
25
-
-
0035878229
-
Evidence for simultaneous abiotic-biotic oxidations in a microbial Fenton's system
-
Howsawkeng J., Watts R.J., Washington D.L., Teel A.L., Hess T.F., and Crawford R.L. Evidence for simultaneous abiotic-biotic oxidations in a microbial Fenton's system. Environ. Sci. Technol. 36 (2001) 2961-2966
-
(2001)
Environ. Sci. Technol.
, vol.36
, pp. 2961-2966
-
-
Howsawkeng, J.1
Watts, R.J.2
Washington, D.L.3
Teel, A.L.4
Hess, T.F.5
Crawford, R.L.6
-
26
-
-
0034887288
-
Current bioremediation practice and perspective
-
Iwamoto T., and Nasu M. Current bioremediation practice and perspective. J. Biosci. Bioeng. 92 (2001) 1-8
-
(2001)
J. Biosci. Bioeng.
, vol.92
, pp. 1-8
-
-
Iwamoto, T.1
Nasu, M.2
-
27
-
-
1642345404
-
Bacterial succession in a petroleum land treatment unit
-
Kaplan C.W., and Kitts C.L. Bacterial succession in a petroleum land treatment unit. Appl. Environ. Microbiol. 70 (2004) 1777-1786
-
(2004)
Appl. Environ. Microbiol.
, vol.70
, pp. 1777-1786
-
-
Kaplan, C.W.1
Kitts, C.L.2
-
28
-
-
12544249618
-
Bacterial community dynamics during in situ bioremediation of petroleum waste sludge in land farming sites
-
Katsivela E., Moore E., Marouki D., Strompl C., Pieper D., and Kalogerakis N. Bacterial community dynamics during in situ bioremediation of petroleum waste sludge in land farming sites. Biodegradation 16 (2005) 169-180
-
(2005)
Biodegradation
, vol.16
, pp. 169-180
-
-
Katsivela, E.1
Moore, E.2
Marouki, D.3
Strompl, C.4
Pieper, D.5
Kalogerakis, N.6
-
29
-
-
0035016972
-
Enhanced biodegradation of polycyclic aromatic hydrocarbons using nonionic surfactants in soil slurry
-
Kim I.S., Park J.-S., and Kim K.-W. Enhanced biodegradation of polycyclic aromatic hydrocarbons using nonionic surfactants in soil slurry. Appl. Geochem. 16 (2001) 1419-1428
-
(2001)
Appl. Geochem.
, vol.16
, pp. 1419-1428
-
-
Kim, I.S.1
Park, J.-S.2
Kim, K.-W.3
-
30
-
-
0031282938
-
Petroleum hydrocarbon bioremediation: sampling and analytical techniques, in situ treatments and commercial microorganisms currently used
-
Korda A., Santas P., Tenente A., and Santas R. Petroleum hydrocarbon bioremediation: sampling and analytical techniques, in situ treatments and commercial microorganisms currently used. Appl. Microbiol. Biotechnol. 48 (1997) 677-686
-
(1997)
Appl. Microbiol. Biotechnol.
, vol.48
, pp. 677-686
-
-
Korda, A.1
Santas, P.2
Tenente, A.3
Santas, R.4
-
31
-
-
0028838839
-
Vigour, vitality and viability of microorganisms
-
Lloyd D., and Hayes A.J. Vigour, vitality and viability of microorganisms. FEMS Microbiol. Lett. 133 (2005) 1-7
-
(2005)
FEMS Microbiol. Lett.
, vol.133
, pp. 1-7
-
-
Lloyd, D.1
Hayes, A.J.2
-
32
-
-
0032772104
-
Microbial population changes during bioremediation of an experimental oil spill
-
MacNaughton S.J., Stephen J.R., Venosa A.D., Davis G.A., Chang Y.J., and White D.C. Microbial population changes during bioremediation of an experimental oil spill. Appl. Environ. Microbiol. 65 (1999) 3566-3574
-
(1999)
Appl. Environ. Microbiol.
, vol.65
, pp. 3566-3574
-
-
MacNaughton, S.J.1
Stephen, J.R.2
Venosa, A.D.3
Davis, G.A.4
Chang, Y.J.5
White, D.C.6
-
33
-
-
0028933689
-
The ability of membrane potential dyes and calcafluor white to distinguish between viable and non-viable bacteria
-
Mason D.J., Lopez-Amoros R., Allman R., Stark J.M., and Lloyd D. The ability of membrane potential dyes and calcafluor white to distinguish between viable and non-viable bacteria. J. Appl. Bacteriol. 78 (1995) 309-315
-
(1995)
J. Appl. Bacteriol.
, vol.78
, pp. 309-315
-
-
Mason, D.J.1
Lopez-Amoros, R.2
Allman, R.3
Stark, J.M.4
Lloyd, D.5
-
34
-
-
18944398558
-
Evidence for in situ crude oil biodegradation after the Prestige oil spill
-
Medina-Bellver J.I., Marín P., Delgado A., Rodríguez-Sánchez A., Reyes E., Ramos J.L., and Marques S. Evidence for in situ crude oil biodegradation after the Prestige oil spill. Environ. Microbiol. 7 (2005) 773-779
-
(2005)
Environ. Microbiol.
, vol.7
, pp. 773-779
-
-
Medina-Bellver, J.I.1
Marín, P.2
Delgado, A.3
Rodríguez-Sánchez, A.4
Reyes, E.5
Ramos, J.L.6
Marques, S.7
-
35
-
-
7044235235
-
Environmental applications for biosurfactants
-
Mulligan C.N. Environmental applications for biosurfactants. Environ. Pollut. 133 (2005) 183-198
-
(2005)
Environ. Pollut.
, vol.133
, pp. 183-198
-
-
Mulligan, C.N.1
-
36
-
-
0347723971
-
Epifluorescence microscope methods for bacterial enumeration in a 4-chlorophenol degrading consortium
-
Pacheco C.C., Alves C.C., Barreiros L., Castro P.M., and Teixeira P.C. Epifluorescence microscope methods for bacterial enumeration in a 4-chlorophenol degrading consortium. Biotechnol. Lett. 25 (2003) 2089-2092
-
(2003)
Biotechnol. Lett.
, vol.25
, pp. 2089-2092
-
-
Pacheco, C.C.1
Alves, C.C.2
Barreiros, L.3
Castro, P.M.4
Teixeira, P.C.5
-
38
-
-
7044226075
-
Study on the possibility of hydrogen peroxide pre-treatment and plant system to remediate soil pollution
-
Lin Q., Chen Y.X., Wang Z.W., and Wang Y.P. Study on the possibility of hydrogen peroxide pre-treatment and plant system to remediate soil pollution. Chemosphere 57 (2004) 1439-1447
-
(2004)
Chemosphere
, vol.57
, pp. 1439-1447
-
-
Lin, Q.1
Chen, Y.X.2
Wang, Z.W.3
Wang, Y.P.4
-
39
-
-
0034786314
-
Bioremediation of gasoline contaminated soil by a bacterial consortium amended with poultry litter, coir pith and rhamnolipid biosurfactant
-
Rahman K.S., Banat I.M., Tharira J., Thauyumanavan T., and Lakshmanaperumalsamy P. Bioremediation of gasoline contaminated soil by a bacterial consortium amended with poultry litter, coir pith and rhamnolipid biosurfactant. Biores. Technol. 81 (2002) 25-32
-
(2002)
Biores. Technol.
, vol.81
, pp. 25-32
-
-
Rahman, K.S.1
Banat, I.M.2
Tharira, J.3
Thauyumanavan, T.4
Lakshmanaperumalsamy, P.5
-
41
-
-
18044395020
-
Kinetics of BTEX biodegradation by a coculture of Pseudomonas putida and Pseudomonas fluorescence under hypoxic conditions
-
Shim H., Hwang B., Lee S.S., and Kong S.H. Kinetics of BTEX biodegradation by a coculture of Pseudomonas putida and Pseudomonas fluorescence under hypoxic conditions. Biodegradation 16 (2005) 319-327
-
(2005)
Biodegradation
, vol.16
, pp. 319-327
-
-
Shim, H.1
Hwang, B.2
Lee, S.S.3
Kong, S.H.4
-
42
-
-
33646480880
-
The selection of mixed microbial inocula in environmental biotechnology: example using petroleum contaminated tropical soils
-
Supaphol S., Panichsakpatana S., Trakulnaleamsai S., Tungkananuruk N., Roughjanajirapa P., and O.'Donnell A.G. The selection of mixed microbial inocula in environmental biotechnology: example using petroleum contaminated tropical soils. J. Microbiol. Methods 65 (2006) 432-441
-
(2006)
J. Microbiol. Methods
, vol.65
, pp. 432-441
-
-
Supaphol, S.1
Panichsakpatana, S.2
Trakulnaleamsai, S.3
Tungkananuruk, N.4
Roughjanajirapa, P.5
O.'Donnell, A.G.6
-
43
-
-
0032795933
-
Bacteria designed for bioremediation
-
Timmis K.N., and Pieper D.H. Bacteria designed for bioremediation. Trends Biotechnol. 17 (1999) 200-204
-
(1999)
Trends Biotechnol.
, vol.17
, pp. 200-204
-
-
Timmis, K.N.1
Pieper, D.H.2
-
45
-
-
32044472103
-
Bacterial community dynamics and polycyclic aromatic hydrocarbon degradation during bioremediation of heavily creosote-contaminated soil
-
Vinas M., Sabate J., Espuny M.J., and Solanas A.M. Bacterial community dynamics and polycyclic aromatic hydrocarbon degradation during bioremediation of heavily creosote-contaminated soil. Appl. Environ. Microbiol. 7 (2005) 7008-7018
-
(2005)
Appl. Environ. Microbiol.
, vol.7
, pp. 7008-7018
-
-
Vinas, M.1
Sabate, J.2
Espuny, M.J.3
Solanas, A.M.4
-
46
-
-
0031389455
-
Microbiological aspects of surfactant use for biological soil remediation
-
Volkering F., Breure A.M., and Rulkens W.H. Microbiological aspects of surfactant use for biological soil remediation. Biodegradation 8 (1998) 401-417
-
(1998)
Biodegradation
, vol.8
, pp. 401-417
-
-
Volkering, F.1
Breure, A.M.2
Rulkens, W.H.3
-
48
-
-
0035369375
-
Microorganisms relevant to bioremediation
-
Watanabe K. Microorganisms relevant to bioremediation. Curr. Opin. Biotechnol. 12 (2001) 237-241
-
(2001)
Curr. Opin. Biotechnol.
, vol.12
, pp. 237-241
-
-
Watanabe, K.1
-
49
-
-
0038143253
-
Molecular and physiological approaches to understanding the ecology of pollutant degradation
-
Watanabe K., and Hamamura N. Molecular and physiological approaches to understanding the ecology of pollutant degradation. Curr. Opin. Biotechnol. 14 (2003) 289-295
-
(2003)
Curr. Opin. Biotechnol.
, vol.14
, pp. 289-295
-
-
Watanabe, K.1
Hamamura, N.2
-
50
-
-
0033012185
-
The fate of heavy oil wastes in soil microcosms II: a performance assessment of source correlation indices
-
Whittaker M., Pollard S.J., and Risden G. The fate of heavy oil wastes in soil microcosms II: a performance assessment of source correlation indices. Sci. Total Environ. 226 (1999) 23-24
-
(1999)
Sci. Total Environ.
, vol.226
, pp. 23-24
-
-
Whittaker, M.1
Pollard, S.J.2
Risden, G.3
-
51
-
-
20144389894
-
Bacterial communities in petroleum oil in stockpiles
-
Yoshida N., Yagi K., Sato D., Watanabe N., Kuroishi T., Nishimoto K., Yanagida A., Katsuragi T., Kanagawa T., Kurane R., and Tani Y. Bacterial communities in petroleum oil in stockpiles. J. Biosci. Bioeng. 99 (2005) 143-149
-
(2005)
J. Biosci. Bioeng.
, vol.99
, pp. 143-149
-
-
Yoshida, N.1
Yagi, K.2
Sato, D.3
Watanabe, N.4
Kuroishi, T.5
Nishimoto, K.6
Yanagida, A.7
Katsuragi, T.8
Kanagawa, T.9
Kurane, R.10
Tani, Y.11
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