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Volumn 3059, Issue , 2004, Pages 301-314

A fast algorithm for constructing suffix arrays for fixed-size alphabets

Author keywords

[No Author keywords available]

Indexed keywords

BIOINFORMATICS; DNA; DNA SEQUENCES; FORESTRY; GENES; GENETIC ENGINEERING; INDEXING (OF INFORMATION);

EID: 35048902513     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: None     Document Type: Article
Times cited : (16)

References (22)
  • 1
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    • A block sorting lossless data compression algorithm
    • Digital Equipment Corporation, 1994
    • M. Burrows and D. Wheeler, A block sorting lossless data compression algorithm, Technical Report 124 (1994), Digital Equipment Corporation, 1994.
    • (1994) Technical Report , vol.124
    • Burrows, M.1    Wheeler, D.2
  • 2
    • 0031381052 scopus 로고    scopus 로고
    • Optimal suffix tree construction with large alphabets
    • M. Farach, Optimal suffix tree construction with large alphabets, IEEE Symp. Found. Computer Science (1997), 137-143.
    • (1997) IEEE Symp. Found. Computer Science , pp. 137-143
    • Farach, M.1
  • 6
    • 0002155190 scopus 로고
    • New indices for text: Pat trees and pat arrays
    • W. B. Frakes and R. A. Baeza-Yates, editors, Prentice Hall
    • G. Gonnet, R. Baeza-Yates, and T. Snider, New indices for text: Pat trees and pat arrays. In W. B. Frakes and R. A. Baeza-Yates, editors, Information Retrieval: Data Structures & Algorithms, Prentice Hall (1992), 66-82.
    • (1992) Information Retrieval: Data Structures & Algorithms , pp. 66-82
    • Gonnet, G.1    Baeza-Yates, R.2    Snider, T.3
  • 9
    • 1842539452 scopus 로고    scopus 로고
    • When indexing equals compression: Experiments with compressing suffix arrays and applications
    • R. Grossi, A. Gupta and J.S. Vitter, When indexing equals compression: Experiments with compressing suffix arrays and applications, ACM-SIAM Symp. on Discrete Algorithms (2004).
    • (2004) ACM-SIAM Symp. on Discrete Algorithms
    • Grossi, R.1    Gupta, A.2    Vitter, J.S.3
  • 10
    • 0033690274 scopus 로고    scopus 로고
    • Compressed suffix arrays and suffix trees with applications to text indexing and string matching
    • R. Grossi and J.S. Vitter, Compressed suffix arrays and suffix trees with applications to text indexing and string matching, ACM Symp. Theory of Computing (2000), 397-406.
    • (2000) ACM Symp. Theory of Computing , pp. 397-406
    • Grossi, R.1    Vitter, J.S.2
  • 11
  • 15
    • 35248831652 scopus 로고    scopus 로고
    • Space-efficient linear time construction of suffix arrays
    • P. Ko and S. Aluru, Space-efficient linear time construction of suffix arrays, Symp. Combinatorial Pattern Matching (2003), 200-210.
    • (2003) Symp. Combinatorial Pattern Matching , pp. 200-210
    • Ko, P.1    Aluru, S.2
  • 16
    • 0027681165 scopus 로고
    • Suffix arrays: A new method for on-line string searches
    • U. Manber and G. Myers, Suffix arrays: A new method for on-line string searches, SIAM J. Comput. 22 (1993), 935-938.
    • (1993) SIAM J. Comput. , vol.22 , pp. 935-938
    • Manber, U.1    Myers, G.2
  • 17
    • 0016942292 scopus 로고
    • A space-economical suffix tree construction algorithm
    • E.M. McCreight, A space-economical suffix tree construction algorithm, J. Assoc. Comput Mach. 23 (1976), 262-272.
    • (1976) J. Assoc. Comput Mach. , vol.23 , pp. 262-272
    • McCreight, E.M.1
  • 18
    • 84949755971 scopus 로고    scopus 로고
    • Compressed text databases with efficient query algorithms based on the compressed suffix array
    • K. Sadakane, Compressed text databases with efficient query algorithms based on the compressed suffix array, Int. Symp. Algorithms and Computation (2000), 410-421.
    • (2000) Int. Symp. Algorithms and Computation , pp. 410-421
    • Sadakane, K.1
  • 19
    • 84968866645 scopus 로고    scopus 로고
    • Succinct representations of Icp Information and improvements in the compressed suffix arrays
    • K. Sadakane, Succinct representations of Icp Information and improvements in the compressed suffix arrays, ACM-SIAM Symp. on Discrete Algorithms (2002), 225-232.
    • (2002) ACM-SIAM Symp. on Discrete Algorithms , pp. 225-232
    • Sadakane, K.1
  • 21
    • 0001704377 scopus 로고
    • On-line construction of suffix trees
    • E. Ukkonen, On-line construction of suffix trees, Algorithmica 14 (1995), 249-260.
    • (1995) Algorithmica , vol.14 , pp. 249-260
    • Ukkonen, E.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.