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Volumn 3240, Issue , 2004, Pages 438-449

Integrating sample-driven and pattern-driven approaches in motif finding

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHMS; BIOINFORMATICS; BRANCH AND BOUND METHOD; LOCATION;

EID: 35048825709     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/978-3-540-30219-3_37     Document Type: Article
Times cited : (31)

References (17)
  • 3
    • 0036110853 scopus 로고    scopus 로고
    • Finding motifs using random projections
    • Buhler, J., Tompa, M.: Finding motifs using random projections. J. Comp. Biol. 9 (2002) 225-242
    • (2002) J. Comp. Biol. , vol.9 , pp. 225-242
    • Buhler, J.1    Tompa, M.2
  • 5
    • 2442591721 scopus 로고    scopus 로고
    • From profiles to patterns and back again: A branch and bound algorithm for finding near optimal motif profiles
    • (RECOMB'2004)
    • Eskin, E.: From profiles to patterns and back again: a branch and bound algorithm for finding near optimal motif profiles. Proc. of the 8th Ann. Int. Conf. on Comp. Mol. Biol. (RECOMB'2004) 115-124
    • Proc. of the 8th Ann. Int. Conf. on Comp. Mol. Biol. , pp. 115-124
    • Eskin, E.1
  • 6
    • 0344376570 scopus 로고    scopus 로고
    • Finding composite regulatory patterns in DNA sequences
    • Eskin, E., Pevzner, P. A.: Finding composite regulatory patterns in DNA sequences. Bioinformatics 18 (2002) S354-363
    • (2002) Bioinformatics , vol.18
    • Eskin, E.1    Pevzner, P.A.2
  • 10
    • 0027912333 scopus 로고
    • Detecting subtle sequence signals: A Gibbs sampling strategy for multiple alignment
    • Lawrence, C. E., Altschul, S. F., Boguski, M. S., Liu, J. S., Neuwald, A. F., Wootton, J. C.: Detecting subtle sequence signals: a Gibbs sampling strategy for multiple alignment. Science 262 (1993) 208-214
    • (1993) Science , vol.262 , pp. 208-214
    • Lawrence, C.E.1    Altschul, S.F.2    Boguski, M.S.3    Liu, J.S.4    Neuwald, A.F.5    Wootton, J.C.6
  • 12
    • 0026524083 scopus 로고
    • Multiple alignment using simulated annealing: Branch point definition in human mRNA splicing
    • Lukashin, A. V., Engelbrecht, J., Brunak, S.: Multiple alignment using simulated annealing: branch point definition in human mRNA splicing. Nucleic Acids Res. 20 (1992) 2511-2516
    • (1992) Nucleic Acids Res. , vol.20 , pp. 2511-2516
    • Lukashin, A.V.1    Engelbrecht, J.2    Brunak, S.3
  • 13
    • 0033677426 scopus 로고    scopus 로고
    • Algorithms for extracting structured motifs using a suffix tree with an application to promoter and regulatory site consensus identification
    • Marsan, L., Sagot, M.-F.: Algorithms for extracting structured motifs using a suffix tree with an application to promoter and regulatory site consensus identification. J. Comp. Biol. 7 (2000) 345-362
    • (2000) J. Comp. Biol. , vol.7 , pp. 345-362
    • Marsan, L.1    Sagot, M.-F.2
  • 15
    • 2342476143 scopus 로고    scopus 로고
    • Finding subtle motifs by branching from sample strings
    • Price, A., Ramabhadran, S., Pevzner, P. A.: Finding subtle motifs by branching from sample strings. Bioinformatics (2003) SII149-155
    • (2003) Bioinformatics
    • Price, A.1    Ramabhadran, S.2    Pevzner, P.A.3
  • 16
    • 0000133199 scopus 로고
    • Identifying protein-binding sites from unaligned DNA fragments
    • Stormo, G. D., Hartzell, G. W.: Identifying protein-binding sites from unaligned DNA fragments. Proc. Natl. Acad. Sci. USA 86 (1989) 1183-1187
    • (1989) Proc. Natl. Acad. Sci. USA , vol.86 , pp. 1183-1187
    • Stormo, G.D.1    Hartzell, G.W.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.