메뉴 건너뛰기




Volumn 189, Issue 19, 2007, Pages 6824-6831

An extremely oligotrophic bacterium, Rhodococcus erythropolis N9T-4, isolated from crude oil

Author keywords

[No Author keywords available]

Indexed keywords

ALDEHYDE DEHYDROGENASE; BICARBONATE; HEXULOSE PHOSPHATE SYNTHASE; ISOMERASE; METHANOL; N,N' DIMETHYL 4 NITROSOANILINE OXIDOREDUCTASE; OXIDOREDUCTASE; PETROLEUM; PHOSPHO 3 HEXULOISOMERASE; RIBULOSE PHOSPHATE; SYNTHETASE; UNCLASSIFIED DRUG;

EID: 34948910152     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/JB.00872-07     Document Type: Article
Times cited : (40)

References (32)
  • 1
    • 0025983561 scopus 로고
    • Assimilation of carbon by methylotrophs
    • Anthony, C. 1991. Assimilation of carbon by methylotrophs. Biotechnology 18:79-109.
    • (1991) Biotechnology , vol.18 , pp. 79-109
    • Anthony, C.1
  • 3
    • 0031051015 scopus 로고    scopus 로고
    • Properties of an NAD(H)-containing methanol dehydrogenase and its activator protein from Bacillus methanolicus
    • Arfman, N., H. J. Hektor, L. V. Bystrykh, N. I. Govorukhina, L. Dijkhuizen, and J. Frank. 1997. Properties of an NAD(H)-containing methanol dehydrogenase and its activator protein from Bacillus methanolicus. Eur. J. Biochem. 244:426-433.
    • (1997) Eur. J. Biochem , vol.244 , pp. 426-433
    • Arfman, N.1    Hektor, H.J.2    Bystrykh, L.V.3    Govorukhina, N.I.4    Dijkhuizen, L.5    Frank, J.6
  • 4
    • 0036968064 scopus 로고    scopus 로고
    • Microbial enzymes involved in carbon dioxide fixation
    • Atomi, H. 2002. Microbial enzymes involved in carbon dioxide fixation. J. Biosci. Bioeng. 94:497-505.
    • (2002) J. Biosci. Bioeng , vol.94 , pp. 497-505
    • Atomi, H.1
  • 6
    • 0027405767 scopus 로고
    • Electron microscopic analysis and structural characterization of novel NADP(H)-containing methanol:N,N′-dimethyl-4-nitrosoaniline oxidoreductases from the gram-positive methylotrophic bacteria Amycolatopsis methanolica and Mycobacterium gastri MB19
    • Bystrykh, L. V., J. Vonck, E. F. J. van Bruggen, J. van Beeumen, B. Samyn, N. I. Govorukhina, N. Arfman, J. A. Duine, and L. Dijkhuizen. 1993. Electron microscopic analysis and structural characterization of novel NADP(H)-containing methanol:N,N′-dimethyl-4-nitrosoaniline oxidoreductases from the gram-positive methylotrophic bacteria Amycolatopsis methanolica and Mycobacterium gastri MB19. J. Bacteriol. 175:1814-1822.
    • (1993) J. Bacteriol , vol.175 , pp. 1814-1822
    • Bystrykh, L.V.1    Vonck, J.2    van Bruggen, E.F.J.3    van Beeumen, J.4    Samyn, B.5    Govorukhina, N.I.6    Arfman, N.7    Duine, J.A.8    Dijkhuizen, L.9
  • 7
    • 0026730941 scopus 로고
    • Cloning, expression, and sequence analysis of the Bacillus methanolicus C1 methanol dehydrogenase gene
    • de Vries, G. E., N. Arfman, P. Terpstra, and L. Dijkhuizen. 1992. Cloning, expression, and sequence analysis of the Bacillus methanolicus C1 methanol dehydrogenase gene. J. Bacteriol. 174:5346-5353.
    • (1992) J. Bacteriol , vol.174 , pp. 5346-5353
    • de Vries, G.E.1    Arfman, N.2    Terpstra, P.3    Dijkhuizen, L.4
  • 8
    • 0013901576 scopus 로고
    • A new ferredoxin-dependent carbon reduction cycle in a photosynthetic bacterium
    • Evans, M. C. W., B. B. Buchanan, and D. I. Arnon. 1966. A new ferredoxin-dependent carbon reduction cycle in a photosynthetic bacterium. Proc. Natl. Acad. Sci. USA 55:928-934.
    • (1966) Proc. Natl. Acad. Sci. USA , vol.55 , pp. 928-934
    • Evans, M.C.W.1    Buchanan, B.B.2    Arnon, D.I.3
  • 9
    • 0004264883 scopus 로고
    • Preparation of clear silica gels that can streaked
    • Funk, H. B., and T. A. Krulwich. 1964. Preparation of clear silica gels that can streaked. J. Bacteriol. 88:1200-1201.
    • (1964) J. Bacteriol , vol.88 , pp. 1200-1201
    • Funk, H.B.1    Krulwich, T.A.2
  • 10
    • 0036158681 scopus 로고    scopus 로고
    • Formaldehyde removal in synthetic and industrial wastewater by Rhodococcus erythropolis UPV-1
    • Hidalgo, A., A. Lopategi, M. Prieto, J. L. Serra, and M. J. Llama. 2002. Formaldehyde removal in synthetic and industrial wastewater by Rhodococcus erythropolis UPV-1. Appl. Microbiol. Biotechnol. 58:260-263.
    • (2002) Appl. Microbiol. Biotechnol , vol.58 , pp. 260-263
    • Hidalgo, A.1    Lopategi, A.2    Prieto, M.3    Serra, J.L.4    Llama, M.J.5
  • 11
    • 3042654769 scopus 로고    scopus 로고
    • Occurrence, biochemistry, and possible biotechnological application of the 3-hydroxypropionate cycle
    • Ishii, M., S. Chuakrut, H. Arai, and Y. Igarashi. 2004. Occurrence, biochemistry, and possible biotechnological application of the 3-hydroxypropionate cycle. Appl. Microbiol. Biotechnol. 64:605-610.
    • (2004) Appl. Microbiol. Biotechnol , vol.64 , pp. 605-610
    • Ishii, M.1    Chuakrut, S.2    Arai, H.3    Igarashi, Y.4
  • 12
    • 34249798717 scopus 로고    scopus 로고
    • 2 fixation pathway of the archaeon Ignicoccus hospitalis: Comprehensive analysis of the central carbon metabolism
    • 2 fixation pathway of the archaeon Ignicoccus hospitalis: comprehensive analysis of the central carbon metabolism. J. Bacteriol. 189:4108-4119.
    • (2007) J. Bacteriol , vol.189 , pp. 4108-4119
    • Jahn, U.1    Huber, H.2    Eisenreich, W.3    Hugler, M.4    Fuchs, G.5
  • 13
    • 33845733219 scopus 로고    scopus 로고
    • Purification, characterization and cloning of aldehyde dehydrogenase from Rhodococcus erythropolis UPV-1
    • Jaureguibeitia, A., L. Saa, M. J. Llama, and J. L. Serra. 2007. Purification, characterization and cloning of aldehyde dehydrogenase from Rhodococcus erythropolis UPV-1. Appl. Microbiol. Biotechnol. 73:1073-1086.
    • (2007) Appl. Microbiol. Biotechnol , vol.73 , pp. 1073-1086
    • Jaureguibeitia, A.1    Saa, L.2    Llama, M.J.3    Serra, J.L.4
  • 14
    • 31444453261 scopus 로고    scopus 로고
    • The physiological role of the ribulose monophosphate pathway in bacteria and archaea
    • Kato, N., H. Yurimoto, and R. K. Thauer. 2006. The physiological role of the ribulose monophosphate pathway in bacteria and archaea. Biosci. Biotechnol. Biochem. 70:10-21.
    • (2006) Biosci. Biotechnol. Biochem , vol.70 , pp. 10-21
    • Kato, N.1    Yurimoto, H.2    Thauer, R.K.3
  • 15
    • 34948845477 scopus 로고    scopus 로고
    • Purification, characterization and cloning of aldehyde dehydrogenase from Rhodococcus erythropolis UPV-1
    • Kuwayama, H., S. Ohara, T. Morio, M. Katoh, H. Urushihara, and Y. Tanaka. 2002. Purification, characterization and cloning of aldehyde dehydrogenase from Rhodococcus erythropolis UPV-1. Nucleic Acids Res. 30:E2.
    • (2002) Nucleic Acids Res , vol.30
    • Kuwayama, H.1    Ohara, S.2    Morio, T.3    Katoh, M.4    Urushihara, H.5    Tanaka, Y.6
  • 17
    • 0014949207 scopus 로고
    • Cleavage of structural proteins during the assembly of the head of bacteriophage T4
    • Laemmli, U. K. 1970. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227:680-685.
    • (1970) Nature , vol.227 , pp. 680-685
    • Laemmli, U.K.1
  • 19
    • 33746191929 scopus 로고    scopus 로고
    • McLeod, M. P., R. L. Warren, W. W. Hsiao, N. Araki, M. Myhre, C. Fernandes, S. Miyazawa, W. Wong, A. L. Lillquist, D. Wang, M. Dosanjh, H. Hara, A. Petrescu, R. D. Morin, G. Yang, J. M. Stott, J. E. Schein, H. Shin, D. Smailus, A. S. Siddiqui, M. A. Marra, S. J. Jones, R. Holt, F. S. Brinkman, K. Miyauchi, M. Fukuda, J. E. Davies, W. W. Mohn, and L. D. Eltis. 2006. The complete genome of Rhodococcus sp. RHA1 provides insights into a catabolic powerhouse. Proc. Natl. Acad. Sci. USA 103:15582-15587.
    • McLeod, M. P., R. L. Warren, W. W. Hsiao, N. Araki, M. Myhre, C. Fernandes, S. Miyazawa, W. Wong, A. L. Lillquist, D. Wang, M. Dosanjh, H. Hara, A. Petrescu, R. D. Morin, G. Yang, J. M. Stott, J. E. Schein, H. Shin, D. Smailus, A. S. Siddiqui, M. A. Marra, S. J. Jones, R. Holt, F. S. Brinkman, K. Miyauchi, M. Fukuda, J. E. Davies, W. W. Mohn, and L. D. Eltis. 2006. The complete genome of Rhodococcus sp. RHA1 provides insights into a catabolic powerhouse. Proc. Natl. Acad. Sci. USA 103:15582-15587.
  • 20
    • 0142136123 scopus 로고    scopus 로고
    • Formaldehyde fixation contributes to detoxification for growth of a non-methylotroph, Burkholderia cepacia TM1, on vanillic acid
    • Mitsui, R., Y. Kusano, H. Yurimoto, Y. Sakai, N. Kato, and M. Tanaka. 2003. Formaldehyde fixation contributes to detoxification for growth of a non-methylotroph, Burkholderia cepacia TM1, on vanillic acid. Appl. Environ. Microbiol. 69:6128-6132.
    • (2003) Appl. Environ. Microbiol , vol.69 , pp. 6128-6132
    • Mitsui, R.1    Kusano, Y.2    Yurimoto, H.3    Sakai, Y.4    Kato, N.5    Tanaka, M.6
  • 21
    • 0030895386 scopus 로고    scopus 로고
    • Purification and properties of methyl formate synthase, a mitochondrial alcohol dehydrogenase, participating in formaldehyde oxidation in methylotrophic yeasts
    • Murdanoto, A. P., Y. Sakai, T. Konishi, F. Yasuda, Y. Tani, and N. Kato. 1997. Purification and properties of methyl formate synthase, a mitochondrial alcohol dehydrogenase, participating in formaldehyde oxidation in methylotrophic yeasts. Appl. Environ. Microbiol. 63:1715-1720.
    • (1997) Appl. Environ. Microbiol , vol.63 , pp. 1715-1720
    • Murdanoto, A.P.1    Sakai, Y.2    Konishi, T.3    Yasuda, F.4    Tani, Y.5    Kato, N.6
  • 22
    • 0028950304 scopus 로고
    • Degradation of the thiocarbamate herbicide EPTC (S-ethyl dipropylcarbamothioate) and biosafening by Rhodococcus sp. strain NI86/21 involve an inducible cytochrome P-450 system and aldehyde dehydrogenase
    • Nagy, I., G. Schoofs, F. Compernolle, P. Proost, J. Vanderleyden, and R. De Mot. 1995. Degradation of the thiocarbamate herbicide EPTC (S-ethyl dipropylcarbamothioate) and biosafening by Rhodococcus sp. strain NI86/21 involve an inducible cytochrome P-450 system and aldehyde dehydrogenase. J. Bacteriol. 177:676-687.
    • (1995) J. Bacteriol , vol.177 , pp. 676-687
    • Nagy, I.1    Schoofs, G.2    Compernolle, F.3    Proost, P.4    Vanderleyden, J.5    De Mot, R.6
  • 23
    • 0028997349 scopus 로고
    • Characterization of the Rhodococcus sp. NI86/21 gene encoding alcohol:N,N′-dimethyl- 4-nitrosoaniline oxidoreductase inducible by atrazine and thiocarbamate herbicides
    • Nagy, I., S. Verheijen, A. De Schrijver, J. Van Damme, P. Proost, G. Schoofs, J. Vanderleyden, and R. De Mot. 1995. Characterization of the Rhodococcus sp. NI86/21 gene encoding alcohol:N,N′-dimethyl- 4-nitrosoaniline oxidoreductase inducible by atrazine and thiocarbamate herbicides. Arch. Microbiol. 163:439-446.
    • (1995) Arch. Microbiol , vol.163 , pp. 439-446
    • Nagy, I.1    Verheijen, S.2    De Schrijver, A.3    Van Damme, J.4    Proost, P.5    Schoofs, G.6    Vanderleyden, J.7    De Mot, R.8
  • 24
    • 33745444345 scopus 로고    scopus 로고
    • The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis
    • Orita, T., T. Sato, H. Yurimoto, N. Kato, H. Atomi, T. Imanaka, and Y. Sakai. 2006. The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis. J. Bacteriol. 188:4698-4704.
    • (2006) J. Bacteriol , vol.188 , pp. 4698-4704
    • Orita, T.1    Sato, T.2    Yurimoto, H.3    Kato, N.4    Atomi, H.5    Imanaka, T.6    Sakai, Y.7
  • 25
    • 0026060421 scopus 로고
    • Oxidation pathways in methylotrophs
    • Rokem, J. S., and I. Goldberg. 1991. Oxidation pathways in methylotrophs. Biotechnology 18:111-126.
    • (1991) Biotechnology , vol.18 , pp. 111-126
    • Rokem, J.S.1    Goldberg, I.2
  • 26
    • 28544433957 scopus 로고    scopus 로고
    • Construction of random transposition mutagenesis system in Rhodococcus erythropolis using IS1415
    • Sallam, K. I., Y. Mitani, and T. Tamura. 2006. Construction of random transposition mutagenesis system in Rhodococcus erythropolis using IS1415. J. Biotechnol. 121:13-22.
    • (2006) J. Biotechnol , vol.121 , pp. 13-22
    • Sallam, K.I.1    Mitani, Y.2    Tamura, T.3
  • 27
    • 0034088407 scopus 로고    scopus 로고
    • Nicotinoprotein (NADH-containing) alcohol dehydrogenase from Rhodococcus erythropolis DSM 1069: An efficient catalyst for coenzyme-independent oxidation of a broad spectrum of alcohols and the interconversion of alcohols and aldehydes
    • Schenkels, P., and J. A. Duine. 2000. Nicotinoprotein (NADH-containing) alcohol dehydrogenase from Rhodococcus erythropolis DSM 1069: an efficient catalyst for coenzyme-independent oxidation of a broad spectrum of alcohols and the interconversion of alcohols and aldehydes. Microbiology 146:775-785.
    • (2000) Microbiology , vol.146 , pp. 775-785
    • Schenkels, P.1    Duine, J.A.2
  • 28
    • 20144364025 scopus 로고    scopus 로고
    • Biosynthesis of ribose-5-phosphate and erythrose-4-phosphate in archaea: A phylogenetic analysis of archaeal genomes
    • Soderberg, T. 2005. Biosynthesis of ribose-5-phosphate and erythrose-4-phosphate in archaea: a phylogenetic analysis of archaeal genomes. Archaea 1:347-352.
    • (2005) Archaea , vol.1 , pp. 347-352
    • Soderberg, T.1
  • 29
    • 0027414466 scopus 로고
    • Nicotinoprotein [NAD(P)-containing] alcohol/aldehyde oxidoreductases. Purification and characterization of a novel type from Amycolatopsis methanolica
    • Van Ophem, P. W., J. Van Beeumen, and J. A. Duine. 1993. Nicotinoprotein [NAD(P)-containing] alcohol/aldehyde oxidoreductases. Purification and characterization of a novel type from Amycolatopsis methanolica. Eur. J. Biochem. 212:819-826.
    • (1993) Eur. J. Biochem , vol.212 , pp. 819-826
    • Van Ophem, P.W.1    Van Beeumen, J.2    Duine, J.A.3
  • 31
    • 0032750845 scopus 로고    scopus 로고
    • Bacillus subtilis yckG and yckF encode two key enzymes of the ribulose monophosphate pathway used by methylotrophs, and yckH is required for their expression
    • Yasueda, H., Y. Kawahara, and S. Sugimoto. 1999. Bacillus subtilis yckG and yckF encode two key enzymes of the ribulose monophosphate pathway used by methylotrophs, and yckH is required for their expression. J. Bacteriol. 181:7154-7160.
    • (1999) J. Bacteriol , vol.181 , pp. 7154-7160
    • Yasueda, H.1    Kawahara, Y.2    Sugimoto, S.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.