Cloning and characterization of two K+ transporters of Debaryomyces hansenii

Microbiology

Volumn 153, Issue 9, 2007, Pages 3034-3043

  Prista, Catarina ^a   González Hernández, Juan Carlos ^a   Ramos, José ^b   Loureiro Dias, Maria C ^a  

^a INSTITUTO SUPERIOR DE AGRONOMIA   (Portugal)

^b Escuela Tecnica Superior de Ingenieros Agronomos y de Montes Universidad de Co   (Spain)

Author keywords

[No Author keywords available]

Indexed keywords

MEMBRANE PROTEIN; POTASSIUM; PROTEIN HAK1; PROTEIN TRK1; RUBIDIUM; SODIUM CHLORIDE; UNCLASSIFIED DRUG;

ARTICLE; CANDIDA ALBICANS; DEBARYOMYCES; DEBARYOMYCES HANSENII; DEBARYOMYCES OCCIDENTALIS; FUNGUS GROWTH; FUNGUS MUTANT; ION TRANSPORT; LIQUID CULTURE; MICHAELIS MENTEN KINETICS; MOLECULAR CLONING; NONHUMAN; NORTHERN BLOTTING; NUCLEOTIDE SEQUENCE; POTASSIUM CELL LEVEL; POTASSIUM TRANSPORT; PRIORITY JOURNAL; PROTEIN EXPRESSION; SACCHAROMYCES CEREVISIAE; SEQUENCE ANALYSIS; SEQUENCE HOMOLOGY; TRANSPORT KINETICS; WILD TYPE;

CATION TRANSPORT PROTEINS; CLONING, MOLECULAR; FUNGAL PROTEINS; GENE EXPRESSION REGULATION, FUNGAL; MOLECULAR SEQUENCE DATA; POTASSIUM; RUBIDIUM; SACCHAROMYCETALES; SEQUENCE ANALYSIS, DNA; SODIUM CHLORIDE;

CANDIDA ALBICANS; DEBARYOMYCES HANSENII; DEBARYOMYCES OCCIDENTALIS; SACCHAROMYCES CEREVISIAE;

EID: 34948878643     PISSN: 13500872     EISSN: None     Source Type: Journal    
DOI: 10.1099/mic.0.2007/006080-0     Document Type: Article

References (59)

1. Aggarwal, M., Bansal, P. K. & Mondal, A. K. (2005). Molecular cloning and biochemical characterization of a 3′(2′),5′-bisphosphate nucleotidase from Debaryomyces hansenii. Yeast 22, 457-470.
2. Altschul, S. F., Madden, T. L., Schaffer, A. A., Zhang, J., Zhang, Z., Miller, W. & Lipman, D. J. (1997). Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25, 3389-3402.
3. Banuelos, M. A., Klein, R. D., Alexander-Bowman, S. J. & Rodriguez-Navarro, A. (1995). A potassium transporter of the yeast Schwanniomyces occidentalis homologous to the Kup system of Escherichia coli has a high concentrative capacity. EMBO J 14, 3021-3027.
4. Banuelos, M. A., Madrid, R. & Rodriguez-Navarro, A. (2000). Individual functions of the HAK and TRK potassium transporters of Schwanniomyces occidentalis. Mol Microbiol 37, 671-679.
5. + influx in Saccharomyces cerevisiae. Yeast 19, 9-15.
6. Belinchon, M. M., Flores, C. L. & Gancedo, J. M. (2004). Sampling Saccharomyces cerevisiae cells by rapid filtration improves the yield of mRNAs. FEMS Yeast Res 4, 751-756.
7. Benito, B., Garciadeblas, B., Schreier, P. & Rodriguez-Navarro, A. (2004). Novel P-type ATPases mediate high-affinity potassium or sodium uptake in fungi. Eukaryot Cell 3, 359-368.
8. Birnboim, H. C. & Doly, J. (1979). A rapid alkaline extraction procedure for screening recombinant plasmid DNA. Nucleic Acids Res 7, 1513-1523.
9. Bonetti, B., Fu, L., Moon, J. & Bedwell, D. M. (1995). The efficiency of translation termination is determined by a synergistic interplay between upstream and downstream sequences in Saccharomyces cerevisiae. J Mol Biol 251, 334-345.
10. Borst-Pauwels, G. W. F. H. (1981). Ion transport in yeast. Biochim Biophys Acta 650, 88-127.
11. Butinar, L., Santos, S., Spencer-Martins, I., Oren, A. & Gunde-Cimerman, N. (2005). Yeast diversity in hypersaline habitats. FEMS Microbiol Lett 244, 229-234.
12. Cocolin, L., Urso, R., Rantsiou, K., Cantoni, C. & Corni, G. (2006). Dynamics and characterization of yeasts during natural fermentation of Italian sausages. FEMS Yeast Res 6, 692-701.
13. Cryer, D. R., Ecclesmall, R. & Marmur, J. (1975). Isolation of yeast DNA. In Methods in Cell Biology, vol. 12, pp. 39-44. Edited by D. M. Prescott. New York: Academic Press.
14. Dujon, B., Sherman, D., Fischer, G., Durrens, P., Casaregola, S., Lafontaine, I., de Montigny, J., Marck, C., Neuveglise, C. & other authors (2004). Genome evolution in yeasts. Nature 430, 35-44.
15. + channel. Biophys J 77, 789-807.
16. + channels and symporters. Biophys J 77, 775-788.
17. Gaber, R. F., Styles, C. A. & Fink G. R. (1988). TRK1 encodes a plasma membrane protein required for high-affinity potassium transport in Saccharomyces cerevisiae. Mol Cell Biol 8, 2848-2859.
18. Garciadeblas, B., Senn, M. E., Banuelos, M. A. & Rodriguez-Navarro, A. (2003). Sodium transport and HKT transporters: the rice model. Plant J 34, 788-801.
19. Geitz, R. D. & Schiesti, R. H. (1995). Transforming yeast with DNA. Methods Mol Cell Biol 5, 255-269.
20. Gomez, M. J., Luyten, K. & Ramos, J. (1996). The capacity to transport potassium influences sodium tolerance in Saccharomyces cerevisiae. FEMS Microbiol Lett 135, 157-160.
21. Gonzalez-Hernandez, J. C., Cardenas-Monroy, C. A. & Pena, A. (2004). Sodium and potassium transport in the halophilic yeast Debaryomyces hansenii. Yeast 21, 403-412.
22. Hanahan, D. (1985). Techniques for transformation of Escherichia coli. In DNA Cloning: a Practical Approach, pp. 109-135. Edited by D. M. Glover. Oxford: IRL Press
23. Haro, R. & Rodriguez-Navarro, A. (2002). Molecular analysis of the mechanism of potassium uptake through the TRK1 transporter of Saccharomyces cerevisiae. Biochim Biophys Acta 1564, 114-122.
24. D helix of the TRK1 potassium transporter of Saccharomyces cerevisiae. Biochim Biophys Acta 1613, 1-6.
25. Haro, R., Sainz, L., Rubio, F. & Rodriguez-Navarro, A. (1999). Cloning of two genes encoding potassium transporters in Neurospora crassa and expression of the corresponding cDNAs in Saccharomyces cerevisiae. Mol Microbiol 31, 511-520.
26. Hill, J. E. Myers, A. M., Koerner, T. J. & Tzagoloff, A. (1986). Yeast/E. coli shuttle vectors with multiple unique restriction sites. Yeast 2, 163-167.
27. Hoffman, C. S. & Winston, F. (1987). A ten-minute DNA preparation from yeast efficiently releases autonomous plasmids for transformation of Escherichia coli. Gene 57, 267-272.
28. Trp genes with anticodons corresponding to UAA and UGA nonsense codons. Nucleic Acids Res 18, 4215-4221.
29. + transporters in Saccharomyces cerevisiae. Mol Cell Biol 11, 4266-4273.
30. Lages, F., Silva-Graça, M. & Lucas, C. (1999). Glycerol active transport is a mechanism underlying halotolerance in yeasts: study of 42 species. Microbiology 145, 2577-2586.
31. Larsson, C., Morales, C., Gustafsson, L. & Adler, L. (1990). Osmoregulation of salt-tolerant yeast Debaryomyces hansenii grown in a chemostat at different salinities. J Bacteriol 172, 1769-1774.
32. Madrid, R., Gomez, M. J., Ramos, J. & Rodriguez-Navarro, A. (1998). Ectopic potassium uptake in trk1trk2 mutants of Saccharomyces cerevisiae correlates with a highly hyperpolarized membrane potential. J Biol Chem 273, 14838-14844.
33. + transporter HAK1 of pepper. Plant Mol Biol 56, 413-421.
34. Mortensen, H. D., Gori, K., Siegumfeldt, H., Nissen, P., Jespersen, L. & Arneborg, N. (2006). Intracellular pH homeostasis plays a role in the NaCl tolerance of Debaryomyces hansenii strains. Appl Microbiol Biotechnol 71, 713-719.
35. Mounier, J., Gelsomino, R., Goerges, S., Vancanneyt M., Vandemeulebroecke, K., Hoste, B., Brennan, N. M., Scherer, S. & Swings, J. (2005). Surface microflora of four smear-ripened cheeses. Appl Environ Microbiol 71, 6489-6500.
36. Norkrans, B. (1966). Studies on marine occurring yeasts: growth related to pH, NaCl concentration and temperature. Arch Microbiol 54, 374-392.
37. Norkrans, B. & Kylin, A. (1969). Regulation of the potassium to sodium ratio and of the osmotic potential in relation to salt tolerance in yeasts. J Bacteriol 100, 836-845.
38. Page, R. D. M. (1996). TreeView: an application to display phylogenetic trees on personal computers. Comput Appl Biosci 12, 357-358.
39. Prista, C., Almagro, A., Loureiro-Dias, M. C. & Ramos, J. (1997). Physiological basis for the high salt tolerance of Debaryomyces hansenii. Appl Environ Microbiol 63, 4005-4009.
40. Prista, C., Almagro, A., Loureiro-Dias, M. C. & Ramos, J. (1998). Kinetics of cation movements in Debaryomyces hansenii. Folia Microbiol (Praha) 43, 212-214.
41. Prista, C., Soeiro, A., Vesely, P., Almagro, A., Ramos, J. & Loureiro-Dias, M. C. (2002). Genes from Debaryomyces hansenii increase salt tolerance in Saccharomyces cerevisiae W303. FEMS Yeast Res 2, 151-157.
42. Prista, C., Loureiro-Dias, M. C., Montiel, V., Garcia, R. & Ramos, J. (2005). Mechanisms underlying the halotolerant way of Debaryomyces hansenii. FEMS Yeast Res 5, 693-701.
43. Pronk, J. T. (2002). Auxotrophic yeast strains in fundamental and applied research. Appl Environ Microbiol 68, 2095-2100.
44. Ramos, J. & Rodriguez-Navarro, A. (1986). Regulation of the potassium transport systems of Saccharomyces cerevisiae as revealed by rubidium transport. Eur J Biochem 154, 307-311.
45. Ramos, J., Haro, R. & Rodriguez-Navarro, A. (1990). Regulation of potassium fluxes in Saccharomyces cerevisiae. Biochim Biophys Acta 1029, 211-217.
46. Ramos, J., Alijo, R., Haro, R. & Rodriguez-Navarro, A. (1994). TRK2 is not a low-affinity potassium transporter in Saccharomyces cerevisiae. J Bacteriol 176, 249-252.
47. Rodriguez-Navarro, A. (2000). Potassium transport in fungi and plants. Biochim Biophys Acta 1469, 1-30.
48. Rodriguez-Navarro, A. & Ramos, J. (1984). Dual system for potassium transport in Saccharomyces cerevisiae. J Bacteriol 159, 940-945.
49. Rodriguez-Navarro, A. & Rubio, F. (2006). High-affinity potassium and sodium transport systems in plants. J Exp Bot 57, 1149-1160.
50. Sambrook, J., Fritsch, E. F. & Maniatis, T. (1989). Molecular Cloning, A Laboratory Manual, 2nd edn. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory.
51. Santa-Maria, G. E., Rubio, F., Dubcovsky, J. & Rodriguez- Navarro, A. (1997). The HAK1 gene of barley is a member of a large gene family and encodes a high-affinity potassium transporter. Plant Cell 9, 2281-2289.
52. Santos, M. A., Keith, G. & Tuite, M. F. (1993). Non-standard translational events in Candida albicans mediated by an unusual seryl-tRNA with a 5′-CAG-3′ (leucine) anticodon. EMBO J 12, 607-616.
53. Schmitt, M. E, Brown, T. A. & Trumpower, B. L. (1990). A rapid and simple method for preparation of RNA from Saccharomyces cerevisiae. Nucleic Acids Res 18, 3091-3092.
54. Senn, M. E., Rubio, F., Banuelos, M. A. & Rodriguez-Navarro, A. (2001). Comparative functional features of plant potassium HvHAK1 and HvHAK2 transporters. J Biol Chem 276, 44563-44569.
55. Serrano, R. (1996). Salt tolerance in plants and microorganisms: toxicity targets and defense responses. Int Rev Cytol 165, 1-52.
56. Surguchov, A. P. (1988). 'Omnipotent' nonsense suppressors: new clues to an old puzzle. Trends Biochem Sci 13, 120-123.
57. Thompson, J. D., Higgins, D. G. & Gibson, T. J. (1994). CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22, 4673-4680.
58. Walker, D. J., Black C. R. & Miller, A. J. (1998). The role of cytosolic potassium and pH in the growth of barley roots. Plant Physiol 118, 957-964.
59. Wallis, J. W., Chrebet G., Brodsky, M., Roffe, M. & Rothstein, R. (1989). A hyper-recombination mutation in Saccharomyces cerevisiae identifies a novel eukaryotic topoisomerase. Cell 58, 409-419.