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Volumn 46, Issue 39, 2007, Pages 11137-11146

A single methionine residue dictates the kinetic mechanism of interprotein electron transfer from methylamine dehydrogenase to amicyanin

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACIDS; CONFORMATIONS; ENZYME ACTIVITY; GENE EXPRESSION; PROTON TRANSFER;

EID: 34848922789     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi7012307     Document Type: Article
Times cited : (13)

References (46)
  • 1
    • 0029806796 scopus 로고    scopus 로고
    • Unraveling the kinetic complexity of interprotein electron transfer reactions
    • Davidson, V. L. (1996) Unraveling the kinetic complexity of interprotein electron transfer reactions, Biochemistry 35, 14035-14039.
    • (1996) Biochemistry , vol.35 , pp. 14035-14039
    • Davidson, V.L.1
  • 2
    • 0033975320 scopus 로고    scopus 로고
    • What controls the rates of interprotein electron-transfer reactions
    • Davidson, V. L. (2000) What controls the rates of interprotein electron-transfer reactions, Acc. Chem. Res. 33, 87-93.
    • (2000) Acc. Chem. Res , vol.33 , pp. 87-93
    • Davidson, V.L.1
  • 3
    • 0344187406 scopus 로고
    • Gated electron transfer: When are observed rates controlled by conformational interconversion?
    • Hoffman, B. M., and Ratner, M. A. (1987) Gated electron transfer: when are observed rates controlled by conformational interconversion? J. Am. Chem. Soc. 109, 6237-6243.
    • (1987) J. Am. Chem. Soc , vol.109 , pp. 6237-6243
    • Hoffman, B.M.1    Ratner, M.A.2
  • 4
    • 0037126717 scopus 로고    scopus 로고
    • Chemically gated electron transfer. A means of accelerating and regulating rates of biological electron transfer
    • Davidson, V. L. (2002) Chemically gated electron transfer. A means of accelerating and regulating rates of biological electron transfer, Biochemistry 41, 14633-14636.
    • (2002) Biochemistry , vol.41 , pp. 14633-14636
    • Davidson, V.L.1
  • 5
    • 0034712643 scopus 로고    scopus 로고
    • Effects of kinetic coupling on experimentally determined electron transfer parameters
    • Davidson, V. L. (2000) Effects of kinetic coupling on experimentally determined electron transfer parameters, Biochemistry 39, 4924-4928.
    • (2000) Biochemistry , vol.39 , pp. 4924-4928
    • Davidson, V.L.1
  • 6
    • 0027970374 scopus 로고
    • Ionic strength dependence of the reaction between methanol dehydrogenase and cytochrome c-551i: Evidence of conformationally coupled electron transfer
    • Harris, T. K., Davidson, V. L., Chen, L., Mathews, F. S., and Xia, Z. X. (1994) Ionic strength dependence of the reaction between methanol dehydrogenase and cytochrome c-551i: evidence of conformationally coupled electron transfer, Biochemistry 33, 12600-12608.
    • (1994) Biochemistry , vol.33 , pp. 12600-12608
    • Harris, T.K.1    Davidson, V.L.2    Chen, L.3    Mathews, F.S.4    Xia, Z.X.5
  • 7
    • 33845183857 scopus 로고
    • Directional electron transfer: Conformational interconversions and their effects on observed electron-transfer rate constants
    • Brunschwig, B. S., and Sutin, N. (1989) Directional electron transfer: Conformational interconversions and their effects on observed electron-transfer rate constants, J. Am. Chem. Soc. 111, 7454-7465.
    • (1989) J. Am. Chem. Soc , vol.111 , pp. 7454-7465
    • Brunschwig, B.S.1    Sutin, N.2
  • 8
    • 0034797851 scopus 로고    scopus 로고
    • Pyrroloquinoline quinone (PQQ) from methanol dehydrogenase and tryptophan tryptophylquinone (TTQ) from methylamine dehydrogenase
    • Davidson, V. L. (2001) Pyrroloquinoline quinone (PQQ) from methanol dehydrogenase and tryptophan tryptophylquinone (TTQ) from methylamine dehydrogenase, Adv. Protein Chem. 58, 95-140.
    • (2001) Adv. Protein Chem , vol.58 , pp. 95-140
    • Davidson, V.L.1
  • 9
    • 0022400803 scopus 로고
    • An inducible periplasmic blue copper protein from Paracoccus denitrificans. Purification, properties, and physiological role
    • Husain, M., and Davidson, V. L. (1985) An inducible periplasmic blue copper protein from Paracoccus denitrificans. Purification, properties, and physiological role, J. Biol. Chem. 260, 14626-14629.
    • (1985) J. Biol. Chem , vol.260 , pp. 14626-14629
    • Husain, M.1    Davidson, V.L.2
  • 10
    • 0022998580 scopus 로고
    • Characterization of two inducible periplasmic c-type cytochromes from Paracoccus denitrificans
    • Husain, M., and Davidson, V. L. (1986) Characterization of two inducible periplasmic c-type cytochromes from Paracoccus denitrificans, J. Biol. Chem. 261, 8577-8580.
    • (1986) J. Biol. Chem , vol.261 , pp. 8577-8580
    • Husain, M.1    Davidson, V.L.2
  • 12
    • 0028296944 scopus 로고
    • Structure of an electron transfer complex: Methylamine dehydrogenase, amicyanin, and cytochrome c551i
    • Chen, L., Durley, R. C., Mathews, F. S., and Davidson, V. L. (1994) Structure of an electron transfer complex: methylamine dehydrogenase, amicyanin, and cytochrome c551i, Science 264, 86-90.
    • (1994) Science , vol.264 , pp. 86-90
    • Chen, L.1    Durley, R.C.2    Mathews, F.S.3    Davidson, V.L.4
  • 14
    • 1542328169 scopus 로고    scopus 로고
    • Electron transfer in crystals of the binary and ternary complexes of methylamine dehydrogenase with amicyanin and cytochrome c551i as detected by EPR spectroscopy
    • Ferrari, D., Di Valentin, M., Carbonera, D., Merli, A., Chen, Z.-W., Mathews, F. S., Davidson, V. L., and Rossi, G.-L. (2004) Electron transfer in crystals of the binary and ternary complexes of methylamine dehydrogenase with amicyanin and cytochrome c551i as detected by EPR spectroscopy, J. Biol. Inorg. Chem 9, 231-237.
    • (2004) J. Biol. Inorg. Chem , vol.9 , pp. 231-237
    • Ferrari, D.1    Di Valentin, M.2    Carbonera, D.3    Merli, A.4    Chen, Z.-W.5    Mathews, F.S.6    Davidson, V.L.7    Rossi, G.-L.8
  • 15
    • 0025785660 scopus 로고
    • A new cofactor in a prokaryotic enzyme: Tryptophan tryptophylquinone as the redox prosthetic group in methylamine dehydrogenase
    • Mclntire, W. S., Wemmer, D. E., Chistoserdov, A., and Lidstrom, M. E. (1991) A new cofactor in a prokaryotic enzyme: tryptophan tryptophylquinone as the redox prosthetic group in methylamine dehydrogenase, Science 252, 817-824.
    • (1991) Science , vol.252 , pp. 817-824
    • Mclntire, W.S.1    Wemmer, D.E.2    Chistoserdov, A.3    Lidstrom, M.E.4
  • 16
    • 0025733905 scopus 로고
    • Intermolecular electron transfer from quinoproteins and its relevance to biosensor technology
    • Davidson, V. L., and Jones, L. H. (1991) Intermolecular electron transfer from quinoproteins and its relevance to biosensor technology, Anal. Chim. Acta 249, 235-240.
    • (1991) Anal. Chim. Acta , vol.249 , pp. 235-240
    • Davidson, V.L.1    Jones, L.H.2
  • 17
    • 0028360177 scopus 로고
    • Kinetic and thermodynamic analysis of a physiologic intermolecular electron-transfer reaction between methylamine dehydrogenase and amicyanin
    • Brooks, H. B., and Davidson, V. L. (1994) Kinetic and thermodynamic analysis of a physiologic intermolecular electron-transfer reaction between methylamine dehydrogenase and amicyanin, Biochemistry 33, 5696-5701.
    • (1994) Biochemistry , vol.33 , pp. 5696-5701
    • Brooks, H.B.1    Davidson, V.L.2
  • 18
    • 0000947245 scopus 로고
    • Free energy dependence of the electron transfer reaction between methylamine dehydrogenase and amicyanin
    • Brooks, H. B., and Davidson, V. L. (1994) Free energy dependence of the electron transfer reaction between methylamine dehydrogenase and amicyanin, J. Am. Chem. Soc. 116, 11201-11202.
    • (1994) J. Am. Chem. Soc , vol.116 , pp. 11201-11202
    • Brooks, H.B.1    Davidson, V.L.2
  • 19
    • 0032483134 scopus 로고    scopus 로고
    • Electron transfer from the aminosemiquinone reaction intermediate of methylamine dehydrogenase to amicyanin
    • Bishop, G. R., and Davidson, V. L. (1998) Electron transfer from the aminosemiquinone reaction intermediate of methylamine dehydrogenase to amicyanin, Biochemistry 37, 11026-11032.
    • (1998) Biochemistry , vol.37 , pp. 11026-11032
    • Bishop, G.R.1    Davidson, V.L.2
  • 20
    • 0029098408 scopus 로고
    • Intermolecular electron transfer from substrate-reduced methylamine dehydrogenase to amicyanin is linked to proton transfer
    • Bishop, G. R., and Davidson, V. L. (1995) Intermolecular electron transfer from substrate-reduced methylamine dehydrogenase to amicyanin is linked to proton transfer, Biochemistry 34, 12082-12086.
    • (1995) Biochemistry , vol.34 , pp. 12082-12086
    • Bishop, G.R.1    Davidson, V.L.2
  • 22
    • 0037454337 scopus 로고    scopus 로고
    • Evidence for substrate activation of electron transfer from methylamine dehydrogenase to amicyanin
    • Davidson, V. L., and Sun, D. (2003) Evidence for substrate activation of electron transfer from methylamine dehydrogenase to amicyanin, J. Am. Chem. Soc. 125, 3224-3225.
    • (2003) J. Am. Chem. Soc , vol.125 , pp. 3224-3225
    • Davidson, V.L.1    Sun, D.2
  • 23
    • 0030729454 scopus 로고    scopus 로고
    • Catalytic role of monovalent cations in the mechanism of proton transfer which gates an interprotein electron transfer reaction
    • Bishop, G. R., and Davidson, V. L. (1997) Catalytic role of monovalent cations in the mechanism of proton transfer which gates an interprotein electron transfer reaction, Biochemistry 36, 13586-13592.
    • (1997) Biochemistry , vol.36 , pp. 13586-13592
    • Bishop, G.R.1    Davidson, V.L.2
  • 24
    • 0030514355 scopus 로고    scopus 로고
    • X-ray crystal structure of the cupredoxin amicyanin from Paracoccus denitrificans, refined at 1.31 Å resolution
    • Cunane, L. M., Chen, Z., Durley, R. C. E., and Mathews, F. S. (1996) X-ray crystal structure of the cupredoxin amicyanin from Paracoccus denitrificans, refined at 1.31 Å resolution, Acta Crystallogr., Sect. D 52, 676-686.
    • (1996) Acta Crystallogr., Sect. D , vol.52 , pp. 676-686
    • Cunane, L.M.1    Chen, Z.2    Durley, R.C.E.3    Mathews, F.S.4
  • 25
    • 3242666035 scopus 로고    scopus 로고
    • Structural studies of two mutants of amicyanin from Paracoccus denitrificans that stabilize the reduced state of the copper
    • Carrell, C. J., Sun, D., Jiang, S., Davidson, V. L., and Mathews, F. S. (2004) Structural studies of two mutants of amicyanin from Paracoccus denitrificans that stabilize the reduced state of the copper, Biochemistry 43, 9372-9380.
    • (2004) Biochemistry , vol.43 , pp. 9372-9380
    • Carrell, C.J.1    Sun, D.2    Jiang, S.3    Davidson, V.L.4    Mathews, F.S.5
  • 26
    • 0037452548 scopus 로고    scopus 로고
    • Effects of engineering uphill electron transfer into the methylamine dehydrogenase-amicyanin-cytochrome c-551i complex
    • Sun, D., and Davidson, V. L. (2003) Effects of engineering uphill electron transfer into the methylamine dehydrogenase-amicyanin-cytochrome c-551i complex, Biochemistry 42, 1772-1776.
    • (2003) Biochemistry , vol.42 , pp. 1772-1776
    • Sun, D.1    Davidson, V.L.2
  • 27
    • 0032546618 scopus 로고    scopus 로고
    • Site-directed mutagenesis of Phe 97 to Glu in amicyanin alters the electronic coupling for interprotein electron transfer from quinol methylamine dehydrogenase
    • Davidson, V. L., Jones, L. H., and Zhu, Z. (1998) Site-directed mutagenesis of Phe 97 to Glu in amicyanin alters the electronic coupling for interprotein electron transfer from quinol methylamine dehydrogenase, Biochemistry 37, 7371-7377.
    • (1998) Biochemistry , vol.37 , pp. 7371-7377
    • Davidson, V.L.1    Jones, L.H.2    Zhu, Z.3
  • 28
    • 33745847159 scopus 로고    scopus 로고
    • Site-directed mutagenesis of proline 52 to glycine in amicyanin converts a true electron transfer reaction into one that is conformationally gated
    • Ma, J. K., Carrell, C. J., Mathews, F. S., and Davidson, V. L. (2006) Site-directed mutagenesis of proline 52 to glycine in amicyanin converts a true electron transfer reaction into one that is conformationally gated, Biochemistry 45, 8284-8293.
    • (2006) Biochemistry , vol.45 , pp. 8284-8293
    • Ma, J.K.1    Carrell, C.J.2    Mathews, F.S.3    Davidson, V.L.4
  • 29
    • 0025026513 scopus 로고
    • Methylamine dehydrogenases from methylotrophic bacteria
    • Davidson, V. L. (1990) Methylamine dehydrogenases from methylotrophic bacteria, Methods Enzymol. 188, 241-246.
    • (1990) Methods Enzymol , vol.188 , pp. 241-246
    • Davidson, V.L.1
  • 30
    • 0030669092 scopus 로고    scopus 로고
    • Factors which stabilize the methylamine dehydrogenase-amicyanin electron transfer protein complex revealed by site-directed mutagenesis
    • Davidson, V. L., Jones, L. H., Graichen, M. E., Mathews, F. S., and Hosler, J. P. (1997) Factors which stabilize the methylamine dehydrogenase-amicyanin electron transfer protein complex revealed by site-directed mutagenesis, Biochemistry 36, 12733-12738.
    • (1997) Biochemistry , vol.36 , pp. 12733-12738
    • Davidson, V.L.1    Jones, L.H.2    Graichen, M.E.3    Mathews, F.S.4    Hosler, J.P.5
  • 31
    • 0026720414 scopus 로고
    • The genetic organization of the mau gene cluster of the facultative autotroph Paracoccus denitrificans
    • Chistoserdov, A. Y., Boyd, J., Mathews, F. S., and Lidstrom, M. E. (1992) The genetic organization of the mau gene cluster of the facultative autotroph Paracoccus denitrificans, Biochem. Biophys. Res. Commun. 184, 1181-1189.
    • (1992) Biochem. Biophys. Res. Commun , vol.184 , pp. 1181-1189
    • Chistoserdov, A.Y.1    Boyd, J.2    Mathews, F.S.3    Lidstrom, M.E.4
  • 32
    • 0032497926 scopus 로고    scopus 로고
    • Molecular basis for interprotein complex-dependent effects on the redox properties of amicyanin
    • Zhu, Z., Cunane, L. M., Chen, Z., Durley, R. C., Mathews, F. S., and Davidson, V. L. (1998) Molecular basis for interprotein complex-dependent effects on the redox properties of amicyanin, Biochemistry 37, 17128-17136.
    • (1998) Biochemistry , vol.37 , pp. 17128-17136
    • Zhu, Z.1    Cunane, L.M.2    Chen, Z.3    Durley, R.C.4    Mathews, F.S.5    Davidson, V.L.6
  • 33
    • 0009965520 scopus 로고
    • Brown, G. C, and Cooper, C. E, Eds, pp, IRL Press, New York
    • Cammack, R. (1995) in Bioenergetics: A Practical Approach (Brown, G. C., and Cooper, C. E., Eds.) pp 85-109, IRL Press, New York.
    • (1995) Bioenergetics: A Practical Approach , pp. 85-109
    • Cammack, R.1
  • 34
    • 27844525458 scopus 로고    scopus 로고
    • Role of the Type I copper center in determining the stability of amicyanin
    • Ma, J. K., Bishop, G. R., and Davidson, V. L. (2005) Role of the Type I copper center in determining the stability of amicyanin, Arch. Biochem. Biophys. 444, 27-33.
    • (2005) Arch. Biochem. Biophys , vol.444 , pp. 27-33
    • Ma, J.K.1    Bishop, G.R.2    Davidson, V.L.3
  • 35
    • 0030035505 scopus 로고    scopus 로고
    • Evidence for a tryptophan tryptophylquinone aminosemiquinone intermediate in the physiologic reaction between methylamine dehydrogenase and amicyanin
    • Bishop, G. R., Brooks, H. B., and Davidson, V. L. (1996) Evidence for a tryptophan tryptophylquinone aminosemiquinone intermediate in the physiologic reaction between methylamine dehydrogenase and amicyanin, Biochemistry 35, 8948-8954.
    • (1996) Biochemistry , vol.35 , pp. 8948-8954
    • Bishop, G.R.1    Brooks, H.B.2    Davidson, V.L.3
  • 36
    • 0022004980 scopus 로고
    • Electron transfers in chemistry and biology
    • Marcus, R. A., and Sutin, N. (1985) Electron transfers in chemistry and biology, Biochim. Biophys. Acta 811, 265-322.
    • (1985) Biochim. Biophys. Acta , vol.811 , pp. 265-322
    • Marcus, R.A.1    Sutin, N.2
  • 37
    • 0023042214 scopus 로고
    • Preliminary X-ray crystallographic study of amicyanin from Paracoccus denitrificans
    • Lim, L. W., Mathews, F. S., Husain, M., and Davidson, V. L. (1986) Preliminary X-ray crystallographic study of amicyanin from Paracoccus denitrificans, J. Mol. Biol. 189, 257-258.
    • (1986) J. Mol. Biol , vol.189 , pp. 257-258
    • Lim, L.W.1    Mathews, F.S.2    Husain, M.3    Davidson, V.L.4
  • 38
    • 0031059866 scopus 로고    scopus 로고
    • Processing of x-ray diffraction data collected by oscillation methods
    • Otwinowski, Z., and Minor, W. (1997) Processing of x-ray diffraction data collected by oscillation methods, Methods Enzymol. 276, 307-326.
    • (1997) Methods Enzymol , vol.276 , pp. 307-326
    • Otwinowski, Z.1    Minor, W.2
  • 39
    • 0030880598 scopus 로고    scopus 로고
    • SHELXL: High resolution refinement
    • Sheldrick, G. M., and Schneider, T. R. (1997) SHELXL: high resolution refinement, Methods Enzymol. 277, 319-343.
    • (1997) Methods Enzymol , vol.277 , pp. 319-343
    • Sheldrick, G.M.1    Schneider, T.R.2
  • 40
    • 0029644940 scopus 로고
    • Where freedom is given, liberties are taken
    • Kleywegt, G. J., and Jones, T. A. (1995) Where freedom is given, liberties are taken, Structure 3, 535-540.
    • (1995) Structure , vol.3 , pp. 535-540
    • Kleywegt, G.J.1    Jones, T.A.2
  • 41
    • 0345330736 scopus 로고
    • Electron transfer in ruthenium-modified proteins
    • Winkler, J. R., and Gray, H. B. (1992) Electron transfer in ruthenium-modified proteins, Chem. Rev. 92, 369-379.
    • (1992) Chem. Rev , vol.92 , pp. 369-379
    • Winkler, J.R.1    Gray, H.B.2
  • 43
    • 33847023097 scopus 로고    scopus 로고
    • Generation of novel copper sites by mutation of the axial ligand of amicyanin. Atomic resolution structures and spectroscopic properties
    • Carrell, C. J., Ma, J. K., Antholine, W. E., Hosler, J. P., Mathews, F. S., and Davidson, V. L. (2007) Generation of novel copper sites by mutation of the axial ligand of amicyanin. Atomic resolution structures and spectroscopic properties, Biochemistry 46, 1900-1912.
    • (2007) Biochemistry , vol.46 , pp. 1900-1912
    • Carrell, C.J.1    Ma, J.K.2    Antholine, W.E.3    Hosler, J.P.4    Mathews, F.S.5    Davidson, V.L.6
  • 44
    • 0034254541 scopus 로고    scopus 로고
    • Molecular basis for complex formation between methylamine dehydrogenase and amicyanin revealed by inverse mutagenesis of an interprotein salt bridge
    • Zhu, Z., Jones, L. H., Graichen, M. E., and Davidson, V. L. (2000) Molecular basis for complex formation between methylamine dehydrogenase and amicyanin revealed by inverse mutagenesis of an interprotein salt bridge, Biochemistry 39, 8830-8836.
    • (2000) Biochemistry , vol.39 , pp. 8830-8836
    • Zhu, Z.1    Jones, L.H.2    Graichen, M.E.3    Davidson, V.L.4
  • 45
    • 0026597444 scopus 로고
    • Free R-value: A novel statistical quantity for assessing the accuracy of crystal structures
    • Brünger, A. T. (1992) Free R-value: a novel statistical quantity for assessing the accuracy of crystal structures, Nature 355, 472-475.
    • (1992) Nature , vol.355 , pp. 472-475
    • Brünger, A.T.1


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