A novel ADP-forming succinyl-CoA synthetase in Thermococcus kodakaraensis structurally related to the archaeal nucleoside diphosphate-forming acetyl-CoA synthetases

Journal of Biological Chemistry

Volumn 282, Issue 37, 2007, Pages 26963-26970

  Shikata, Kenichi ^a   Fukui, Toshiaki ^a   Atomi, Haruyuki ^a   Imanaka, Tadayuki ^a  

^a KYOTO UNIVERSITY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

METABOLIC PATHWAY; THERMOCOCCUS KODAKARAENSIS;

GENES; HYDROPHOBICITY; METABOLISM;

ENZYME KINETICS;

ACETATE COENZYME A LIGASE; ADENOSINE DIPHOSPHATE; ARCHAEAL PROTEIN; NUCLEOSIDE DIPHOSPHATASE; SUCCINYL COENZYME A SYNTHETASE; SYNTHETASE; UNCLASSIFIED DRUG;

ARTICLE; ENZYME STRUCTURE; HYDROPHOBICITY; NONHUMAN; PRIORITY JOURNAL; PROTEIN DOMAIN; PROTEOMICS; STRUCTURE ANALYSIS; THERMOCOCCUS; THERMOCOCCUS KODAKARAENSIS;

ACETATE-COA LIGASE; ENZYME STABILITY; GLUTAMIC ACID; IMMUNOPRECIPITATION; MODELS, MOLECULAR; SUBSTRATE SPECIFICITY; SUCCINATE-COA LIGASES; THERMOCOCCUS;

ARCHAEA; PYROCOCCUS FURIOSUS; THERMOCOCCALES; THERMOCOCCUS KODAKARENSIS;

EID: 34848840085     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M702694200     Document Type: Article

References (33)

1. Itoh, T. (2003) J. Biosci. Bioeng. 96, 203-212
2. Adams, M. W. W. (1994) FEMS Microbiol. Rev. 15, 261-277
3. Robb, F. T., Park, J.-B., and Adams, M. W. W. (1992) Biochim. Biophys. Acta 1120, 267-272
4. Ma, K., Hutchins, A., Sung, S.-J., and Adams, M. W. W. (1997) Proc. Natl. Acad. Sci. U. S. A. 94, 9608-9613
5. Heider, J., Mai, X., and Adams, M. W. W. (1996) J. Bacteriol. 178, 780-787
6. Mai, X., and Adams, M. W. W. (1996) J. Bacteriol. 178, 5890-5896
7. Mai, X., and Adams, M. W. W. (1994) J. Biol. Chem. 269, 16726-16732
8. Fukui, T., Atomi, H., Kanai, T., Matsumi, R., Fujiwara, S., and Imanaka, T. (2005) Genome Res. 15, 352-363
9. Cohen, G. N., Barbe, V., Flament, D., Galperin, M., Heilig, R., Lecompte, O., Poch, O., Prieur, D., Quérellou, J., Ripp, R., Thierry, J.-C., Van der Oost, J., Weissenbach, J., Zivanovic, Y., and Forterre, P. (2003) Mol. Microbiol. 47, 1495-1512
10. Kawarabayasi, Y., Sawada, M., Horikawa, H., Haikawa, Y., Hino, Y., Yamamoto, S., Sekine, M., Baba, S., Kosugi, H., Hosoyama, A., Nagai, Y., Sakai, M., Ogura, K., Otsuka, R., Nakazawa, H., Takamiya, M., Ohfuku, Y., Funahashi, T., Tanaka, T., Kudoh, Y., Yamazaki, J., Kushida, N., Oguchi, A., Aoki, K., and Kikuchi, H. (1998) DNA Res. 5, 55-76
11. Schäfer, T., and Schönheit, P. (1991) Arch. Microbiol. 155, 366-377
12. Schäfer, T., Selig, M., and Schönheit, P. (1993) Arch. Microbiol. 159, 72-83
13. Mai, X., and Adams, M. W. W. (1996) J. Bacteriol. 178, 5897-5903
14. Musfeldt, M., Selig, M., and Schönheit, P. (1999) J. Bacteriol. 181, 5885-5888
15. Krahe, M., Antranikian, G., and Märkl, H. (1996) FEMS Microbiol. Rev. 18, 271-285
16. Kanai, T., Imanaka, H., Nakajima, A., Uwamori, K., Omori, Y., Fukui, T., Atomi, H., and Imanaka, T. (2005) J. Biotechnol. 116, 271-282
17. Field, J., Rosenthal, B., and Samuelson, J. (2000) Mol. Microbiol. 38, 446-455
18. Sánchez, L. B., Galperin, M. Y., and Müller, M. (2000) J. Biol. Chem. 275, 5794-5803
19. Labes, A., and Schönheit, P. (2001) Arch. Microbiol. 176, 329-338
20. Musfeldt, M., and Schönheit, P. (2002) J. Bacteriol. 184, 636-644
21. Bräsen, C., and Schönheit, P. (2004) Arch. Microbiol. 182, 277-287
22. Bräsen, C., and Schönheit, P. (2004) FEMS Microbiol. Lett. 241, 21-26
23. Fraser, M. E., James, M. N. G., Bridger, W. A., and Wolodko, W. T. (1999) J. Mol. Biol. 285, 1633-1653
24. Fraser, M. E., Hayakawa, K., Hume, M. S., Ryan, D. G., and Brownie, E. R. (2006) J. Biol. Chem. 281, 11058-11065
25. Atomi, H., Fukui, T., Kanai, T., Morikawa, M., and Imanaka, T. (2004) Archaea 1, 263-267
26. Takeda, Y., Suzuki, F., and Inoue, H. (1969) Methods Enzymol. 13, 153-160
27. Wolodko, W. T., Fraser, M. E., James, M. N. G., and Bridger, W. A. (1994) J. Biol. Chem. 269, 10883-10890
28. Fraser, M. E., James, M. N. G., Bridger, W. A., and Wolodko, W. T. (2000) J. Mol. Biol. 299, 1325-1339
29. Robb, F. T., Maeder, D. L., Brown, J. R., DiRuggiero, J., Stump, M. D., Yeh, R. K., Weiss, R. B., and Dunn, D. M. (2001) Methods Enzymol. 330, 134-157
30. Joyce, M. A., Fraser, M. E., James, M. N. G., Bridger, W. A., and Wolodko, W. T. (2000) Biochemistry 39, 17-25
31. Fraser, M. E., Joyce, M. A., Ryan, D. G., and Wolodko, W. T. (2002) Biochemistry 41, 537-546
32. Johnson, J. D., Muhonen, W. W., and Lambeth, D. O. (1998) J. Biol. Chem. 273, 27573-27579
33. DeLano, W. L. (2002) The PyMOL Molecular Graphics System, DeLano Scientific, Palo Alto, CA