메뉴 건너뛰기




Volumn 99, Issue 4, 2007, Pages 406-413

Diversity and evolution of the Mhc-DRB1 gene in the two endemic Iberian subspecies of Pyrenean chamois, Rupicapra pyrenaica

Author keywords

Caprinae; Diversity; Evolution; Mhc DRB1; Rupicapra ssp; SSCP

Indexed keywords

HLA DR ANTIGEN; HLA-DRB1 ANTIGEN; UNCLASSIFIED DRUG;

EID: 34748879998     PISSN: 0018067X     EISSN: 13652540     Source Type: Journal    
DOI: 10.1038/sj.hdy.6801016     Document Type: Article
Times cited : (10)

References (46)
  • 1
    • 0028823258 scopus 로고
    • Nested PCR allows the characterization of Taq I and Pst I RFLPs in the second exon of the caprine MHC class II DRB gene
    • Amills M, Francino O, Sanchez A (1995). Nested PCR allows the characterization of Taq I and Pst I RFLPs in the second exon of the caprine MHC class II DRB gene. Vet Immunol Immunopathol 48: 313-321.
    • (1995) Vet Immunol Immunopathol , vol.48 , pp. 313-321
    • Amills, M.1    Francino, O.2    Sanchez, A.3
  • 3
    • 34748835528 scopus 로고    scopus 로고
    • Arnal MC, Fernández de Luco D (2004). Sanitary survey of Pyrenean chamois in the Aragonian Pyrenees (1997-2002). In: El sarrio pirenaico (ed). Rupicapra p. pyrenaica: Biología, patología y gestión. Consejo de protección de la Naturalez de Aragón y Fedenca: Zaragoza. pp 125-132.
    • Arnal MC, Fernández de Luco D (2004). Sanitary survey of Pyrenean chamois in the Aragonian Pyrenees (1997-2002). In: El sarrio pirenaico (ed). Rupicapra p. pyrenaica: Biología, patología y gestión. Consejo de protección de la Naturalez de Aragón y Fedenca: Zaragoza. pp 125-132.
  • 6
    • 27644568934 scopus 로고    scopus 로고
    • A long-term genetic survey of an ungulate population reveals balancing selection acting on MHC through spatial and temporal fluctuations in selection
    • Charbonnel N, Pemberton J (2005). A long-term genetic survey of an ungulate population reveals balancing selection acting on MHC through spatial and temporal fluctuations in selection. Heredity 95: 1-12.
    • (2005) Heredity , vol.95 , pp. 1-12
    • Charbonnel, N.1    Pemberton, J.2
  • 8
    • 0027172450 scopus 로고
    • Major histocompatibility complex monomorphism and low levels of DNA fingerprinting variability in a reintroduced and rapidly expanding population of beavers
    • Ellegren H, Hartman G, Johansson M, Andersson L (1993). Major histocompatibility complex monomorphism and low levels of DNA fingerprinting variability in a reintroduced and rapidly expanding population of beavers. Proc Natl Acad Sci USA 90: 8150-8153.
    • (1993) Proc Natl Acad Sci USA , vol.90 , pp. 8150-8153
    • Ellegren, H.1    Hartman, G.2    Johansson, M.3    Andersson, L.4
  • 9
    • 0345244820 scopus 로고    scopus 로고
    • Epizootiology of sarcoptic mange in a population of Cantabrian chamois (Rupicapra pyrenaica parva) in Northwestern Spain
    • Fernández-Morán J, Gómez S, Ballesteros F, Quirós P, Benito JL, Feliu C et al. (1997). Epizootiology of sarcoptic mange in a population of Cantabrian chamois (Rupicapra pyrenaica parva) in Northwestern Spain. Vet Parasitol 73: 163-171.
    • (1997) Vet Parasitol , vol.73 , pp. 163-171
    • Fernández-Morán, J.1    Gómez, S.2    Ballesteros, F.3    Quirós, P.4    Benito, J.L.5    Feliu, C.6
  • 10
    • 34748926613 scopus 로고    scopus 로고
    • Population evolution of Cantabrian chamois Rupicapra pyrenaica parva with sarcoptic mange sarcoptes scabiei
    • Central-Eastern Asturias Northwestern Spain, Saragosa, Spain, 35pp
    • Gonzalez-Quirós P, Silva P, Solano S (2002). Population evolution of Cantabrian chamois Rupicapra pyrenaica parva with sarcoptic mange sarcoptes scabiei in Central-Eastern Asturias (Northwestern Spain). III World Congress on Mountain Ungulates. Saragosa, Spain, 35pp.
    • (2002) III World Congress on Mountain Ungulates
    • Gonzalez-Quirós, P.1    Silva, P.2    Solano, S.3
  • 11
    • 0242578620 scopus 로고    scopus 로고
    • A simple, fast and accurate algorithm to estimate large phylogenies by maximum likelihood
    • Guindon S, Gascuel O (2003). A simple, fast and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol 52: 696-704.
    • (2003) Syst Biol , vol.52 , pp. 696-704
    • Guindon, S.1    Gascuel, O.2
  • 12
    • 0034887645 scopus 로고    scopus 로고
    • Is the decline of desert bighorn sheep from infectious disease the result of low MHC variation?
    • Gutierrez-Ezpeleta GA, Hedrick PW, Kalinowski ST, Garrigan D, Boyce WM (2001). Is the decline of desert bighorn sheep from infectious disease the result of low MHC variation? Heredity 86: 439-450.
    • (2001) Heredity , vol.86 , pp. 439-450
    • Gutierrez-Ezpeleta, G.A.1    Hedrick, P.W.2    Kalinowski, S.T.3    Garrigan, D.4    Boyce, W.M.5
  • 13
    • 34748863232 scopus 로고    scopus 로고
    • Hall TA (1999). A Bioedit: a user friendly biological sequence alignment editor and analysis program for windows 95/98/ NT. Nucl Acids Symp Ser 41: 95-98.
    • Hall TA (1999). A Bioedit: a user friendly biological sequence alignment editor and analysis program for windows 95/98/ NT. Nucl Acids Symp Ser 41: 95-98.
  • 15
    • 34748871013 scopus 로고    scopus 로고
    • Herrero J, Escudero E, García JM, García-Serrano A, Prada C, Couto S (2004). Management and survey on Pyrenean chamois in the Aragonian Pyrenees. In: El sarrio pirenaico (ed). Rupicapra p. pyrenaica: Biología, patología y gestión. Consejo de protección de la Naturalez de Aragón y Fedenca: Zaragoza. pp 69-82.
    • Herrero J, Escudero E, García JM, García-Serrano A, Prada C, Couto S (2004). Management and survey on Pyrenean chamois in the Aragonian Pyrenees. In: El sarrio pirenaico (ed). Rupicapra p. pyrenaica: Biología, patología y gestión. Consejo de protección de la Naturalez de Aragón y Fedenca: Zaragoza. pp 69-82.
  • 16
    • 0000752502 scopus 로고
    • The nonconcept of species diversity: A critique and alternative parameters
    • Hurlbert SH (1971). The nonconcept of species diversity: a critique and alternative parameters. Ecology 52: 577-586.
    • (1971) Ecology , vol.52 , pp. 577-586
    • Hurlbert, S.H.1
  • 17
    • 0033821028 scopus 로고    scopus 로고
    • Single-strand conformational plymorphism and sequence polymorphism of Mhc-DRB in Latxa and Karrantzar sheep, implications for Caprinae phylogeny
    • Jugo BM, Vicario A (2000). Single-strand conformational plymorphism and sequence polymorphism of Mhc-DRB in Latxa and Karrantzar sheep, implications for Caprinae phylogeny. Immunogenetics 51: 887-897.
    • (2000) Immunogenetics , vol.51 , pp. 887-897
    • Jugo, B.M.1    Vicario, A.2
  • 18
    • 0000732090 scopus 로고
    • Evolution of protein molecules
    • Munroe HN ed, Academic Press: New York
    • Jukes TH, Cantor CR (1969). Evolution of protein molecules. In: Munroe HN (ed). Mammalian Protein Metabolism, Vol. 3. Academic Press: New York.
    • (1969) Mammalian Protein Metabolism , vol.3
    • Jukes, T.H.1    Cantor, C.R.2
  • 20
    • 0042380105 scopus 로고    scopus 로고
    • Sequences and diversity of 17 new Ovar-DRB1 alleles from three breeds of sheep
    • Konnai S, Nagaoka Y, Takeshima S, Onuma M, Aida Y (2003). Sequences and diversity of 17 new Ovar-DRB1 alleles from three breeds of sheep. Eur J Immunogenet 30: 275-282.
    • (2003) Eur J Immunogenet , vol.30 , pp. 275-282
    • Konnai, S.1    Nagaoka, Y.2    Takeshima, S.3    Onuma, M.4    Aida, Y.5
  • 21
    • 3242810318 scopus 로고    scopus 로고
    • MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment
    • Kumar S, Tamura K, Nei M (2004). MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinform 5: 150-163.
    • (2004) Brief Bioinform , vol.5 , pp. 150-163
    • Kumar, S.1    Tamura, K.2    Nei, M.3
  • 23
    • 34748831318 scopus 로고    scopus 로고
    • Langella O 2002, Populations, version 1.2.28. CNRS
    • Langella O (2002). Populations, version 1.2.28. CNRS, http://www.pge.cnrs-gif.fr/bioinfo/populations/index.php?lang=fr&doc= populations.
  • 25
    • 0032145518 scopus 로고    scopus 로고
    • Usefulness of molecular markers for detecting population bottlenecks via monitoring genetic change
    • Luikart G, Sherwin WB, Steele BM, Allendorf FW (1998). Usefulness of molecular markers for detecting population bottlenecks via monitoring genetic change. Mol Ecol 7: 963-974.
    • (1998) Mol Ecol , vol.7 , pp. 963-974
    • Luikart, G.1    Sherwin, W.B.2    Steele, B.M.3    Allendorf, F.W.4
  • 26
    • 0024186067 scopus 로고
    • Systematics, phylogenetic relationship and dispersal of the chamois (Rupicapra spp.)
    • Masini F, Lovari S (1988). Systematics, phylogenetic relationship and dispersal of the chamois (Rupicapra spp.). Quaternary Res 30: 339-349.
    • (1988) Quaternary Res , vol.30 , pp. 339-349
    • Masini, F.1    Lovari, S.2
  • 27
    • 0029079387 scopus 로고
    • Low major histocompatibility complex class II diversity in European and North American moose
    • Mikko S, Andersson L (1995). Low major histocompatibility complex class II diversity in European and North American moose. Proc Natl Acad Sci USA 92: 4259-4263.
    • (1995) Proc Natl Acad Sci USA , vol.92 , pp. 4259-4263
    • Mikko, S.1    Andersson, L.2
  • 28
    • 0032898815 scopus 로고    scopus 로고
    • Monomorphism and polymorphism at Mhc DRB loci in domestic and wild ruminants
    • Feb;
    • Mikko S, Roed K, Schmutz S, Andersson L (1999). Monomorphism and polymorphism at Mhc DRB loci in domestic and wild ruminants. Immunol Rev Feb; 167: 169-178.
    • (1999) Immunol Rev , vol.167 , pp. 169-178
    • Mikko, S.1    Roed, K.2    Schmutz, S.3    Andersson, L.4
  • 29
    • 0031454632 scopus 로고    scopus 로고
    • A comparative analysis of Mhc DRB3 polymorphism in the American Bison (Bison bison)
    • Mikko S, Spencer M, Morris B, Stabile S, Basu T, Stormont C et al. (1997). A comparative analysis of Mhc DRB3 polymorphism in the American Bison (Bison bison). J Hered 88: 499-503.
    • (1997) J Hered , vol.88 , pp. 499-503
    • Mikko, S.1    Spencer, M.2    Morris, B.3    Stabile, S.4    Basu, T.5    Stormont, C.6
  • 30
    • 0022507362 scopus 로고
    • Simple methods for estimating the numbers of synonymous and nonsynonimous nucleotide substitutions
    • Nei M, Gojobori T (1986). Simple methods for estimating the numbers of synonymous and nonsynonimous nucleotide substitutions. Mol Biol Evol 3: 418-426.
    • (1986) Mol Biol Evol , vol.3 , pp. 418-426
    • Nei, M.1    Gojobori, T.2
  • 31
    • 0020965531 scopus 로고
    • Accuracy of estimated phylogenetic trees from molecular data. II. Gene frequency data
    • Nei M, Tajima F, Tateno Y (1983). Accuracy of estimated phylogenetic trees from molecular data. II. Gene frequency data. J Mol Evol 91: 153-170.
    • (1983) J Mol Evol , vol.91 , pp. 153-170
    • Nei, M.1    Tajima, F.2    Tateno, Y.3
  • 33
    • 0024258090 scopus 로고
    • Interactive influence of infectious disease and genetic diversity in natural populations
    • O'Brien SJ, Evermann JF (1988). Interactive influence of infectious disease and genetic diversity in natural populations. Trends Ecol Evol 3: 254-259.
    • (1988) Trends Ecol Evol , vol.3 , pp. 254-259
    • O'Brien, S.J.1    Evermann, J.F.2
  • 34
    • 0024595101 scopus 로고
    • Detection of polymorphism of human DNA by gel electrophoresis as single-strand conformation polymorphisms
    • Orita M, Iwahana H, Kanazawa H, Hayashy K, Sekiya T (1989). Detection of polymorphism of human DNA by gel electrophoresis as single-strand conformation polymorphisms. Proc Natl Acad Sci USA 86: 2766-2770.
    • (1989) Proc Natl Acad Sci USA , vol.86 , pp. 2766-2770
    • Orita, M.1    Iwahana, H.2    Kanazawa, H.3    Hayashy, K.4    Sekiya, T.5
  • 35
    • 0036435257 scopus 로고    scopus 로고
    • Phylogeography of chamois (Rupicapra spp) inferred from microsatellites
    • Pérez T, Albornoz J, Domínguez A (2002). Phylogeography of chamois (Rupicapra spp) inferred from microsatellites. Mol Phylogenet Evol 25: 524-534.
    • (2002) Mol Phylogenet Evol , vol.25 , pp. 524-534
    • Pérez, T.1    Albornoz, J.2    Domínguez, A.3
  • 36
    • 0031856979 scopus 로고    scopus 로고
    • Identifying populations for conservation on the basis of genetic markers
    • Petit RJ, El Mousadik A, Pons O (1998). Identifying populations for conservation on the basis of genetic markers. Conserv Biol 12: 844-855.
    • (1998) Conserv Biol , vol.12 , pp. 844-855
    • Petit, R.J.1    El Mousadik, A.2    Pons, O.3
  • 37
    • 0001155314 scopus 로고
    • Evolution of diversity of the major histocompatibility complex
    • Potts WK, Wakeland EK (1990). Evolution of diversity of the major histocompatibility complex. Trends Ecol Evol 5: 181-187.
    • (1990) Trends Ecol Evol , vol.5 , pp. 181-187
    • Potts, W.K.1    Wakeland, E.K.2
  • 38
    • 0000262278 scopus 로고
    • GENEPOP (version 12), population genetics software for exact tests and ecumeniscism
    • Raymond M, Rousset F (1995). GENEPOP (version 12), population genetics software for exact tests and ecumeniscism. J Hered 86: 248-249.
    • (1995) J Hered , vol.86 , pp. 248-249
    • Raymond, M.1    Rousset, F.2
  • 41
    • 34748853394 scopus 로고    scopus 로고
    • Sequence analysis of the MHC class II DRB alleles in Alpine chamois (Rupicapra r. rupicapra)
    • Schaschl H, Goodman SJ, Suchentrunk F (2004). Sequence analysis of the MHC class II DRB alleles in Alpine chamois (Rupicapra r. rupicapra). Dev Comp Immunol 91: 125-135.
    • (2004) Dev Comp Immunol , vol.91 , pp. 125-135
    • Schaschl, H.1    Goodman, S.J.2    Suchentrunk, F.3
  • 42
    • 17844384852 scopus 로고    scopus 로고
    • Recombination and the origin of sequence diversity in the DRB MHC Class II locus in chamois (Rupicapra sp.)
    • Schaschl H, Suchentrunk F, Hammer S, Goodman SJ (2005). Recombination and the origin of sequence diversity in the DRB MHC Class II locus in chamois (Rupicapra sp.). Immunogenetics 57: 108-115.
    • (2005) Immunogenetics , vol.57 , pp. 108-115
    • Schaschl, H.1    Suchentrunk, F.2    Hammer, S.3    Goodman, S.J.4
  • 44
    • 0029100727 scopus 로고
    • Phylogenetic test of the molecular clock and linearized trees
    • Takezaki N, Rzhetsky A, Nei M (1995). Phylogenetic test of the molecular clock and linearized trees. Mol Biol Evol 12: 823-833.
    • (1995) Mol Biol Evol , vol.12 , pp. 823-833
    • Takezaki, N.1    Rzhetsky, A.2    Nei, M.3
  • 46
    • 0025021834 scopus 로고
    • DNA variation at the mammalian major histocompatibility complex reflects genomic diversity and population history
    • Yuhki N, O'Brien SJ (1990). DNA variation at the mammalian major histocompatibility complex reflects genomic diversity and population history. Proc Natl Acad Sci USA 87: 836-840.
    • (1990) Proc Natl Acad Sci USA , vol.87 , pp. 836-840
    • Yuhki, N.1    O'Brien, S.J.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.