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Volumn 50, Issue 5, 2007, Pages 690-699

Map and analysis of microsatellites in the genome of Populus: The first sequenced perennial plant

Author keywords

GC content; Genic and nongenic regions; Length diversification; Microsatellite; Poplar genome

Indexed keywords

MICROSATELLITE DNA;

EID: 34648836296     PISSN: 10069305     EISSN: 18622798     Source Type: Journal    
DOI: 10.1007/s11427-007-0073-6     Document Type: Article
Times cited : (14)

References (28)
  • 1
    • 0036846814 scopus 로고    scopus 로고
    • Genomics and forest biology: Populus emerges as the perennial favortie
    • Wullschleger S D, Jansson S, Taylor G. Genomics and forest biology: Populus emerges as the perennial favortie. Plant Cell, 2002, 14: 2651-2655
    • (2002) Plant Cell , vol.14 , pp. 2651-2655
    • Wullschleger, S.D.1    Jansson, S.2    Taylor, G.3
  • 2
    • 0034435641 scopus 로고    scopus 로고
    • R. Emerging model systems in plant biology: Poplar (Populus) as a model torest tree
    • Bradshaw H D, Ceulemans R, Davis J, et al. R. Emerging model systems in plant biology: Poplar (Populus) as a model torest tree. J Plant Growth Regul, 2000, 19: 306-313
    • (2000) J Plant Growth Regul , vol.19 , pp. 306-313
    • Bradshaw, H.D.1    Ceulemans, R.2    Davis, J.3
  • 3
    • 1442291078 scopus 로고    scopus 로고
    • Poplar genomics is getting popular: The impact of the poplar genome project on tree research
    • Tuskan G A, DiFazio S P, Teichmann T. Poplar genomics is getting popular: The impact of the poplar genome project on tree research. Plant Biol, 2004, 6: 2-4
    • (2004) Plant Biol , vol.6 , pp. 2-4
    • Tuskan, G.A.1    Difazio, S.P.2    Teichmann, T.3
  • 4
    • 0742323273 scopus 로고    scopus 로고
    • Poplar genome sequence: Functional genomics in an ecologically dominant plant species
    • Brunner A M, Busov V B, Strauss S H. Poplar genome sequence: Functional genomics in an ecologically dominant plant species. Trends Plant Sci, 2004, 9: 49-56
    • (2004) Trends Plant Sci , vol.9 , pp. 49-56
    • Brunner, A.M.1    Busov, V.B.2    Strauss, S.H.3
  • 5
    • 33748760611 scopus 로고    scopus 로고
    • The genome of black cottonwood, Populus Trichocarpa (Torr.& Gray Ex Brayshaw)
    • Tuskan G A, DiFazio S P, Hellsten U, et al. The genome of black cottonwood, Populus Trichocarpa (Torr.& Gray Ex Brayshaw). Science, 2006, 313: 1596-1604
    • (2006) Science , vol.313 , pp. 1596-1604
    • Tuskan, G.A.1    Difazio, S.P.2    Hellsten, U.3
  • 6
    • 0035706327 scopus 로고    scopus 로고
    • Genealogical inference of closely related species based on microsatellites
    • Schlotterer C. Genealogical inference of closely related species based on microsatellites. Genet Res Camb, 2001, 78: 209-212
    • (2001) Genet Res Camb , vol.78 , pp. 209-212
    • Schlotterer, C.1
  • 7
    • 0030183057 scopus 로고    scopus 로고
    • Polymorphism revealed by simple sequence repeats
    • Powell W, Machray G C, Provan J. Polymorphism revealed by simple sequence repeats. Trends Plant Sci, 1996, 1: 215-222
    • (1996) Trends Plant Sci , vol.1 , pp. 215-222
    • Powell, W.1    MacHray, G.C.2    Provan, J.3
  • 8
    • 33747854965 scopus 로고    scopus 로고
    • SSR primer and SSR taxonomy tree: Biome SSR discovery
    • Jewell E, Robinson A, Savage D, et al. SSR primer and SSR taxonomy tree: Biome SSR discovery. Nucl Acids Res, 2006, 34: W656-W659
    • (2006) Nucl Acids Res , vol.34
    • Jewell, E.1    Robinson, A.2    Savage, D.3
  • 9
    • 1842684727 scopus 로고    scopus 로고
    • Characterization of microsatellites revealed by genomci sequencing of Populus Trichocarpa
    • Tuskan G A, Gunter L E, Yang Z M, et al. Characterization of microsatellites revealed by genomci sequencing of Populus Trichocarpa. Can For Res, 2004, 34: 85-93
    • (2004) Can for Res , vol.34 , pp. 85-93
    • Tuskan, G.A.1    Gunter, L.E.2    Yang, Z.M.3
  • 10
    • 0037946978 scopus 로고    scopus 로고
    • Microsatellite analysis of gentic diversity in four populations of Populus tremuloides in Quebec
    • Wyman J, Bruneau A, Tremblay M F. Microsatellite analysis of gentic diversity in four populations of Populus tremuloides in Quebec. Can J Bot, 2003, 81: 367
    • (2003) Can J Bot , vol.81 , pp. 367
    • Wyman, J.1    Bruneau, A.2    Tremblay, M.F.3
  • 11
    • 4344706400 scopus 로고    scopus 로고
    • Large-scale heterospecific segregation distortion in Populus revealed by a Dense Genetic Map
    • Yin T M, Difazio S P, Gunter L E, et al. Large-scale heterospecific segregation distortion in Populus revealed by a Dense Genetic Map. Theor Appl Genet, 2004, 109: 451-463
    • (2004) Theor Appl Genet , vol.109 , pp. 451-463
    • Yin, T.M.1    Difazio, S.P.2    Gunter, L.E.3
  • 12
    • 0022533981 scopus 로고
    • Cryptic simplicity in DNA is a major source of genetic variation
    • Tautz D, Trick M, Dover G A. Cryptic simplicity in DNA is a major source of genetic variation. Nature, 1986, 322: 652-656
    • (1986) Nature , vol.322 , pp. 652-656
    • Tautz, D.1    Trick, M.2    Dover, G.A.3
  • 13
    • 0031081111 scopus 로고    scopus 로고
    • Simple sequence repeats as a source of quantitative genetic variation
    • Kashi Y, King D, Soller M. Simple sequence repeats as a source of quantitative genetic variation. Trends Genet, 1997, 13: 74-78
    • (1997) Trends Genet , vol.13 , pp. 74-78
    • Kashi, Y.1    King, D.2    Soller, M.3
  • 14
    • 0036897944 scopus 로고    scopus 로고
    • Microsatellites: Genomic distribution, putative functions and mutational mechanisms: A review
    • Li Y C, Korol A B, Beiles A, et al. Microsatellites: Genomic distribution, putative functions and mutational mechanisms: A review. Mol Ecol, 2002, 11: 2453-2465
    • (2002) Mol Ecol , vol.11 , pp. 2453-2465
    • Li, Y.C.1    Korol, A.B.2    Beiles, A.3
  • 15
    • 10744226741 scopus 로고    scopus 로고
    • Two distinct modes of microsatellite mutation processes: Evidence from the complete genomic sequences of nine species
    • Dieringer D, Schlotterer C. Two distinct modes of microsatellite mutation processes: Evidence from the complete genomic sequences of nine species. Genome Res, 2003, 13: 2242-2251
    • (2003) Genome Res , vol.13 , pp. 2242-2251
    • Dieringer, D.1    Schlotterer, C.2
  • 16
    • 0036256695 scopus 로고    scopus 로고
    • MapChart: Software for the graphical presentation of linkage maps and QTLs
    • Voorrips R E. MapChart: Software for the graphical presentation of linkage maps and QTLs. J Heredity, 2002, 93: 77-78
    • (2002) J Heredity , vol.93 , pp. 77-78
    • Voorrips, R.E.1
  • 17
    • 4344662335 scopus 로고
    • A study of cytology and speciation in the Genus Populus L
    • Smith E C. A study of cytology and speciation in the Genus Populus L. J Arnold Arb, 1943, 24: 275 305
    • (1943) J Arnold Arb , vol.24 , pp. 275305
    • Smith, E.C.1
  • 18
    • 0033858199 scopus 로고    scopus 로고
    • Microsatellites in different eukaryotic genomes: Survey and analysis
    • Toth G, Gaspari Z, Jurka, J. Microsatellites in different eukaryotic genomes: Survey and analysis. Genome Res, 2000, 10: 967-981
    • (2000) Genome Res , vol.10 , pp. 967-981
    • Toth, G.1    Gaspari, Z.2    Jurka, J.3
  • 19
    • 0030240434 scopus 로고    scopus 로고
    • Simple sequences in a 'minimal' genome
    • Hancock J M. Simple sequences in a 'minimal' genome. Nat Genet, 1996, 14: 14-15
    • (1996) Nat Genet , vol.14 , pp. 14-15
    • Hancock, J.M.1
  • 20
    • 0031778070 scopus 로고    scopus 로고
    • Mutation rate in hu-man microsatellites: Influence of the structure and length of the tandem repeat
    • Brinkmann B, Klintschar M, Neuhuber F, et al. Mutation rate in hu-man microsatellites: Influence of the structure and length of the tandem repeat. Am J Hum Genet, 1998, 62: 1408-1415
    • (1998) Am J Hum Genet , vol.62 , pp. 1408-1415
    • Brinkmann, B.1    Klintschar, M.2    Neuhuber, F.3
  • 21
    • 0036567508 scopus 로고    scopus 로고
    • Heterogeneity in the rate and pattern of germline mutation at individual microsatellite loci
    • Brohede J, Primmer C R, Moller A, et al. Heterogeneity in the rate and pattern of germline mutation at individual microsatellite loci. Nucl Acids Res, 2002, 30: 1997-2003
    • (2002) Nucl Acids Res , vol.30 , pp. 1997-2003
    • Brohede, J.1    Primmer, C.R.2    Moller, A.3
  • 23
    • 0033857247 scopus 로고    scopus 로고
    • Microsatellite variability differs between dinucleotide repeat motifs-Evidence from Drosophila melanogaster
    • Bachtrog D, Agis M, Imhof M, et al. Microsatellite variability differs between dinucleotide repeat motifs-Evidence from Drosophila melanogaster. Mol Biol Evol, 2000, 17: 1277-1285
    • (2000) Mol Biol Evol , vol.17 , pp. 1277-1285
    • Bachtrog, D.1    Agis, M.2    Imhof, M.3
  • 24
    • 0029597867 scopus 로고
    • The contribution of slippage-like processes to genome evolution
    • Hancock J M. The contribution of slippage-like processes to genome evolution. J Mol Evol, 1995, 41: 1038-1047
    • (1995) J Mol Evol , vol.41 , pp. 1038-1047
    • Hancock, J.M.1
  • 25
    • 0030985156 scopus 로고    scopus 로고
    • The complex pathology of trinucleotide repeats
    • Reddy P S, Housman D E. The complex pathology of trinucleotide repeats. Curr Opin Cell Biol, 1997, 9: 364-372
    • (1997) Curr Opin Cell Biol , vol.9 , pp. 364-372
    • Reddy, P.S.1    Housman, D.E.2
  • 26
    • 0031062315 scopus 로고    scopus 로고
    • Microsatellite instability in human solid tumors
    • Lothe R A. Microsatellite instability in human solid tumors. Mol Med Today, 1997, 3: 61-68
    • (1997) Mol Med Today , vol.3 , pp. 61-68
    • Lothe, R.A.1
  • 27
    • 0034649566 scopus 로고    scopus 로고
    • Analysis of the genome sequence of the flowering plant Arabidopsis thaliana
    • The Arabidopsis Genome Initiative.
    • The Arabidopsis Genome Initiative. Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature, 2000, 408: 796-815
    • (2000) Nature , vol.408 , pp. 796-815
  • 28
    • 0037023349 scopus 로고    scopus 로고
    • A draft sequence of the rice genome (Oryza Sativa L. Ssp. Japonica)
    • Goff S A, Ricke D, Lan T H, et al. A draft sequence of the rice genome (Oryza Sativa L. Ssp. Japonica). Science, 2002, 296: 92-100
    • (2002) Science , vol.296 , pp. 92-100
    • Goff, S.A.1    Ricke, D.2    Lan, T.H.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.