메뉴 건너뛰기




Volumn 425, Issue , 2007, Pages 139-152

Identification and Characterization of Modification Enzymes by Biochemical Analysis of the Proteome

Author keywords

[No Author keywords available]

Indexed keywords

NUCLEIC ACID; PROTEOME; RNA; TRANSFER RNA METHYLTRANSFERASE; ENZYME;

EID: 34548742936     PISSN: 00766879     EISSN: None     Source Type: Book Series    
DOI: 10.1016/S0076-6879(07)25006-2     Document Type: Review
Times cited : (3)

References (33)
  • 1
    • 0036795285 scopus 로고    scopus 로고
    • Two proteins that form a complex are required for 7-methylguanosine modification of yeast tRNA
    • Alexandrov A., Martzen M.R., and Phizicky E.M. Two proteins that form a complex are required for 7-methylguanosine modification of yeast tRNA. RNA 8 (2002) 1253-1266
    • (2002) RNA , vol.8 , pp. 1253-1266
    • Alexandrov, A.1    Martzen, M.R.2    Phizicky, E.M.3
  • 2
    • 0032428969 scopus 로고    scopus 로고
    • The essential Gcd10p-Gcd14p nuclear complex is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA
    • Anderson J., Phan L., Cuesta R., Carlson B.A., Pak M., Asano K., Bjork G.R., Tamame M., and Hinnebusch A.G. The essential Gcd10p-Gcd14p nuclear complex is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA. Genes Dev. 12 (1998) 3650-3662
    • (1998) Genes Dev. , vol.12 , pp. 3650-3662
    • Anderson, J.1    Phan, L.2    Cuesta, R.3    Carlson, B.A.4    Pak, M.5    Asano, K.6    Bjork, G.R.7    Tamame, M.8    Hinnebusch, A.G.9
  • 3
    • 0034625166 scopus 로고    scopus 로고
    • The Gcd10p/Gcd14p complex is the essential two-subunit tRNA(1-methyladenosine) methyltransferase of Saccharomyces cerevisiae
    • Anderson J., Phan L., and Hinnebusch A.G. The Gcd10p/Gcd14p complex is the essential two-subunit tRNA(1-methyladenosine) methyltransferase of Saccharomyces cerevisiae. Proc. Natl. Acad. Sci. USA 97 (2000) 5173-5178
    • (2000) Proc. Natl. Acad. Sci. USA , vol.97 , pp. 5173-5178
    • Anderson, J.1    Phan, L.2    Hinnebusch, A.G.3
  • 4
    • 0035860809 scopus 로고    scopus 로고
    • Identification and characterization of the tRNA:Psi 31-synthase (Pus6p) of Saccharomyces cerevisiae
    • Ansmant I., Motorin Y., Massenet S., Grosjean H., and Branlant C. Identification and characterization of the tRNA:Psi 31-synthase (Pus6p) of Saccharomyces cerevisiae. J. Biol. Chem. 276 (2001) 34934-34940
    • (2001) J. Biol. Chem. , vol.276 , pp. 34934-34940
    • Ansmant, I.1    Motorin, Y.2    Massenet, S.3    Grosjean, H.4    Branlant, C.5
  • 5
    • 0032752966 scopus 로고    scopus 로고
    • RNA: Pseudouridine synthetase Pus1 from Saccharomyces cerevisiae: Oligomerization property and stoichiometry of the complex with yeast tRNA(Phe)
    • Arluison V., Batelier G., Ries-Kautt M., and Grosjean H. RNA: Pseudouridine synthetase Pus1 from Saccharomyces cerevisiae: Oligomerization property and stoichiometry of the complex with yeast tRNA(Phe). Biochimie 81 (1999) 751-756
    • (1999) Biochimie , vol.81 , pp. 751-756
    • Arluison, V.1    Batelier, G.2    Ries-Kautt, M.3    Grosjean, H.4
  • 6
    • 0030772852 scopus 로고    scopus 로고
    • The yeast gene YNL292w encodes a pseudouridine synthase (Pus4) catalyzing the formation of psi55 in both mitochondrial and cytoplasmic tRNAs
    • Becker H.F., Motorin Y., Planta R.J., and Grosjean H. The yeast gene YNL292w encodes a pseudouridine synthase (Pus4) catalyzing the formation of psi55 in both mitochondrial and cytoplasmic tRNAs. Nucleic Acids Res. 25 (1997) 4493-4499
    • (1997) Nucleic Acids Res. , vol.25 , pp. 4493-4499
    • Becker, H.F.1    Motorin, Y.2    Planta, R.J.3    Grosjean, H.4
  • 8
    • 0020443521 scopus 로고
    • Complete analysis of cellular nucleotides by two-dimensional thin layer chromatography
    • Bochner B.R., and Ames B.N. Complete analysis of cellular nucleotides by two-dimensional thin layer chromatography. J. Biol. Chem. 257 (1982) 9759-9769
    • (1982) J. Biol. Chem. , vol.257 , pp. 9759-9769
    • Bochner, B.R.1    Ames, B.N.2
  • 9
    • 0033053644 scopus 로고    scopus 로고
    • 16S ribosomal RNA pseudouridine synthase RsuA of Escherichia coli: Deletion, mutation of the conserved Asp102 residue, and sequence comparison among all other pseudouridine synthases
    • Conrad J., Niu L., Rudd K., Lane B.G., and Ofengand J. 16S ribosomal RNA pseudouridine synthase RsuA of Escherichia coli: Deletion, mutation of the conserved Asp102 residue, and sequence comparison among all other pseudouridine synthases. RNA 5 (1999) 751-763
    • (1999) RNA , vol.5 , pp. 751-763
    • Conrad, J.1    Niu, L.2    Rudd, K.3    Lane, B.G.4    Ofengand, J.5
  • 12
    • 0033527628 scopus 로고    scopus 로고
    • An adenosine deaminase that generates inosine at the wobble position of tRNAs
    • Gerber A.P., and Keller W. An adenosine deaminase that generates inosine at the wobble position of tRNAs. Science 286 (1999) 1146-1149
    • (1999) Science , vol.286 , pp. 1146-1149
    • Gerber, A.P.1    Keller, W.2
  • 13
    • 0348014687 scopus 로고    scopus 로고
    • tRNAHis maturation: An essential yeast protein catalyzes addition of a guanine nucleotide to the 5′ end of tRNAHis
    • Gu W., Jackman J.E., Lohan A.J., Gray M.W., and Phizicky E.M. tRNAHis maturation: An essential yeast protein catalyzes addition of a guanine nucleotide to the 5′ end of tRNAHis. Genes Dev. 17 (2003) 2889-2901
    • (2003) Genes Dev. , vol.17 , pp. 2889-2901
    • Gu, W.1    Jackman, J.E.2    Lohan, A.J.3    Gray, M.W.4    Phizicky, E.M.5
  • 14
    • 0036654975 scopus 로고    scopus 로고
    • A genome-wide screen for site-specific DNA-binding proteins
    • Hazbun T.R., and Fields S. A genome-wide screen for site-specific DNA-binding proteins. Mol. Cell. Proteomics 1 (2002) 538-543
    • (2002) Mol. Cell. Proteomics , vol.1 , pp. 538-543
    • Hazbun, T.R.1    Fields, S.2
  • 15
    • 0037407933 scopus 로고    scopus 로고
    • Identification of the yeast gene encoding the tRNA m1G methyltransferase responsible for modification at position 9
    • Jackman J.E., Montange R.K., Malik H.S., and Phizicky E.M. Identification of the yeast gene encoding the tRNA m1G methyltransferase responsible for modification at position 9. RNA 9 (2003) 574-585
    • (2003) RNA , vol.9 , pp. 574-585
    • Jackman, J.E.1    Montange, R.K.2    Malik, H.S.3    Phizicky, E.M.4
  • 17
    • 22744442531 scopus 로고    scopus 로고
    • Pseudouridylation of yeast U2 snRNA is catalyzed by either an RNA-guided or RNA-independent mechanism
    • Ma X., Yang C., Alexandrov A., Grayhack E.J., Behm-Ansmant I., and Yu Y.T. Pseudouridylation of yeast U2 snRNA is catalyzed by either an RNA-guided or RNA-independent mechanism. EMBO J. 24 (2005) 2403-2413
    • (2005) EMBO J. , vol.24 , pp. 2403-2413
    • Ma, X.1    Yang, C.2    Alexandrov, A.3    Grayhack, E.J.4    Behm-Ansmant, I.5    Yu, Y.T.6
  • 18
    • 0037447130 scopus 로고    scopus 로고
    • Pseudouridylation (Psi) of U2 snRNA in S. cerevisiae is catalyzed by an RNA-independent mechanism
    • Ma X., Zhao X., and Yu Y.T. Pseudouridylation (Psi) of U2 snRNA in S. cerevisiae is catalyzed by an RNA-independent mechanism. EMBO J. 22 (2003) 1889-1897
    • (2003) EMBO J. , vol.22 , pp. 1889-1897
    • Ma, X.1    Zhao, X.2    Yu, Y.T.3
  • 20
    • 0032821744 scopus 로고    scopus 로고
    • Multisite-specific tRNA:m5C-methyltransferase (Trm4) in yeast Saccharomyces cerevisiae: Identification of the gene and substrate specificity of the enzyme
    • Motorin Y., and Grosjean H. Multisite-specific tRNA:m5C-methyltransferase (Trm4) in yeast Saccharomyces cerevisiae: Identification of the gene and substrate specificity of the enzyme. RNA 5 (1999) 1105-1118
    • (1999) RNA , vol.5 , pp. 1105-1118
    • Motorin, Y.1    Grosjean, H.2
  • 23
    • 0037007220 scopus 로고    scopus 로고
    • Trm7p catalyses the formation of two 2′-O-methylriboses in yeast tRNA anticodon loop
    • Pintard L., Lecointe F., Bujnicki J.M., Bonnerot C., Grosjean H., and Lapeyre B. Trm7p catalyses the formation of two 2′-O-methylriboses in yeast tRNA anticodon loop. EMBO J. 21 (2002) 1811-1820
    • (2002) EMBO J. , vol.21 , pp. 1811-1820
    • Pintard, L.1    Lecointe, F.2    Bujnicki, J.M.3    Bonnerot, C.4    Grosjean, H.5    Lapeyre, B.6
  • 27
    • 22844445708 scopus 로고    scopus 로고
    • Identification of a novel gene encoding a flavin-dependent tRNA:m5U methyltransferase in bacteria-evolutionary implications
    • Urbonavicius J., Skouloubris S., Myllykallio H., and Grosjean H. Identification of a novel gene encoding a flavin-dependent tRNA:m5U methyltransferase in bacteria-evolutionary implications. Nucleic Acids Res. 33 (2005) 3955-3964
    • (2005) Nucleic Acids Res. , vol.33 , pp. 3955-3964
    • Urbonavicius, J.1    Skouloubris, S.2    Myllykallio, H.3    Grosjean, H.4
  • 29
    • 33847290869 scopus 로고    scopus 로고
    • A 2′-O-methyltransferase responsible for modification of yeast tRNA at position 4
    • Wilkinson M., Crary S., Jackman J.E., Grayhack E., and Phizicky E. A 2′-O-methyltransferase responsible for modification of yeast tRNA at position 4. RNA 13 (2007) 404-413
    • (2007) RNA , vol.13 , pp. 404-413
    • Wilkinson, M.1    Crary, S.2    Jackman, J.E.3    Grayhack, E.4    Phizicky, E.5
  • 30
    • 2342421220 scopus 로고    scopus 로고
    • The specificities of four yeast dihydrouridine synthases for cytoplasmic tRNAs
    • Xing F., Hiley S.L., Hughes T.R., and Phizicky E.M. The specificities of four yeast dihydrouridine synthases for cytoplasmic tRNAs. J. Biol. Chem. 279 (2004) 17850-17860
    • (2004) J. Biol. Chem. , vol.279 , pp. 17850-17860
    • Xing, F.1    Hiley, S.L.2    Hughes, T.R.3    Phizicky, E.M.4
  • 31
    • 0036229871 scopus 로고    scopus 로고
    • A conserved family of Saccharomyces cerevisiae synthases effects dihydrouridine modification of tRNA
    • Xing F., Martzen M.R., and Phizicky E.M. A conserved family of Saccharomyces cerevisiae synthases effects dihydrouridine modification of tRNA. RNA 8 (2002) 370-381
    • (2002) RNA , vol.8 , pp. 370-381
    • Xing, F.1    Martzen, M.R.2    Phizicky, E.M.3
  • 32
    • 0032820659 scopus 로고    scopus 로고
    • Construction of 4-thiouridine site-specifically substituted RNAs for cross-linking studies
    • Yu Y.T. Construction of 4-thiouridine site-specifically substituted RNAs for cross-linking studies. Methods 18 (1999) 13-21
    • (1999) Methods , vol.18 , pp. 13-21
    • Yu, Y.T.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.