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Volumn 40, Issue 4, 2007, Pages 101-111

Quantitative colocalization analysis of multicolor confocal immunofluorescence microscopy images: Pushing pixels to explore biological phenomena

Author keywords

Colocalization coefficients; Colocalization software; Confocal fluorescence microscopy; Quantitative colocalization analysis

Indexed keywords

ANTIGEN; BILE SALT; MAJOR BASIC PROTEIN; MULTIDRUG RESISTANCE PROTEIN 2; THROMBOCYTE ACTIVATING FACTOR RECEPTOR;

EID: 34548695678     PISSN: 00445991     EISSN: 13475800     Source Type: Journal    
DOI: 10.1267/ahc.07002     Document Type: Review
Times cited : (361)

References (35)
  • 1
    • 22944463765 scopus 로고    scopus 로고
    • New methods to evaluate colocalization of fluorophores in immunocytochemical preparations as exemplified by a study on A2A and D2 receptors in Chinese hamster ovary cells
    • Agnati, L. F., Fuxe, K., Torvinen, M., Genedani, S., Franco, R., Watson, S., Nussdorfer, G. G., Leo, G. and Guidolin, D. (2005) New methods to evaluate colocalization of fluorophores in immunocytochemical preparations as exemplified by a study on A2A and D2 receptors in Chinese hamster ovary cells. Histochem. Cytochem. 53; 941-953.
    • (2005) Histochem. Cytochem , vol.53 , pp. 941-953
    • Agnati, L.F.1    Fuxe, K.2    Torvinen, M.3    Genedani, S.4    Franco, R.5    Watson, S.6    Nussdorfer, G.G.7    Leo, G.8    Guidolin, D.9
  • 2
    • 33646055526 scopus 로고    scopus 로고
    • Trypsin-sensitive modulation of intestinal epithelial MD-2 as mechanism of lipopolysaccharide tolerance
    • Cario, E., Golenbock, D. T., Visintin, A., Runzi, M., Gerken, G. and Podolsky, D. K. (2006) Trypsin-sensitive modulation of intestinal epithelial MD-2 as mechanism of lipopolysaccharide tolerance. J. Immunol. 176; 4258-4266.
    • (2006) J. Immunol , vol.176 , pp. 4258-4266
    • Cario, E.1    Golenbock, D.T.2    Visintin, A.3    Runzi, M.4    Gerken, G.5    Podolsky, D.K.6
  • 3
    • 0028590111 scopus 로고
    • Simultaneous confocal recording of multiple fluorescent labels with improved channel separation
    • Carlsson, K., Aslund, N., Mossberg, K. and Philip, J. (1994) Simultaneous confocal recording of multiple fluorescent labels with improved channel separation. J. Microsc. 176; 287-299.
    • (1994) J. Microsc , vol.176 , pp. 287-299
    • Carlsson, K.1    Aslund, N.2    Mossberg, K.3    Philip, J.4
  • 4
    • 0028989807 scopus 로고
    • Improved fluorophore separation with IMS confocal microscopy
    • Carlsson, K. and Ulfhake, B. (1995) Improved fluorophore separation with IMS confocal microscopy. Neuroreport 6; 1169-1173.
    • (1995) Neuroreport , vol.6 , pp. 1169-1173
    • Carlsson, K.1    Ulfhake, B.2
  • 5
    • 34548660752 scopus 로고    scopus 로고
    • CoLocalization Research Software, I. (2006) CoLocalizer Pro User Guide. CoLocalization Research Software, Inc. Ver. 2.
    • CoLocalization Research Software, I. (2006) CoLocalizer Pro User Guide. CoLocalization Research Software, Inc. Ver. 2.
  • 6
    • 2942642590 scopus 로고    scopus 로고
    • Automatic and quantitative measurement of protein-protein colocalization in live cells
    • Costes, S. V., Daelemans, D., Cho, E. H., Dobbin, Z., Pavlakis, G. and Lockett, S. (2004) Automatic and quantitative measurement of protein-protein colocalization in live cells. Biophys. J. 86; 3993-4003.
    • (2004) Biophys. J , vol.86 , pp. 3993-4003
    • Costes, S.V.1    Daelemans, D.2    Cho, E.H.3    Dobbin, Z.4    Pavlakis, G.5    Lockett, S.6
  • 7
    • 13544252467 scopus 로고    scopus 로고
    • Tumor metastasis but not tumor growth is dependent on Src-mediated vascular permeability
    • Criscuoli, M. L., Nguyen, M. and Eliceiri, B. P. (2005) Tumor metastasis but not tumor growth is dependent on Src-mediated vascular permeability. Blood 105; 1508-1514.
    • (2005) Blood , vol.105 , pp. 1508-1514
    • Criscuoli, M.L.1    Nguyen, M.2    Eliceiri, B.P.3
  • 8
    • 0000303923 scopus 로고
    • Multicolor analysis in confocal immunofluorescence microscopy
    • Demandolx, D. and Davoust, J. (1995) Multicolor analysis in confocal immunofluorescence microscopy. J. Trace Microprobe Tech. 13; 217-225.
    • (1995) J. Trace Microprobe Tech , vol.13 , pp. 217-225
    • Demandolx, D.1    Davoust, J.2
  • 9
    • 0031020836 scopus 로고    scopus 로고
    • Multicolour analysis and local image correlation in confocal microscopy
    • Demandolx, D. and Davoust, J. (1997) Multicolour analysis and local image correlation in confocal microscopy. J. Microsc. 185; 21-36.
    • (1997) J. Microsc , vol.185 , pp. 21-36
    • Demandolx, D.1    Davoust, J.2
  • 10
    • 31344439513 scopus 로고    scopus 로고
    • How the molecule number is correctly quantified in two-color fluorescence cross-correlation spectroscopy: Corrections for cross-talk and quenching in experiments
    • Foldes-Papp, Z. (2005) How the molecule number is correctly quantified in two-color fluorescence cross-correlation spectroscopy: corrections for cross-talk and quenching in experiments. Curr. Pharm. Biotech. 6; 437-444.
    • (2005) Curr. Pharm. Biotech , vol.6 , pp. 437-444
    • Foldes-Papp, Z.1
  • 11
    • 0037054546 scopus 로고    scopus 로고
    • Phospholipids undergo hop diffusion in compartmentalized cell membrane
    • Fujiwara, T., Ritchie, K., Murakoshi, H., Jacobson, K. and Kusumi, A. (2002) Phospholipids undergo hop diffusion in compartmentalized cell membrane. J. Cell Biol. 157; 1071-1081.
    • (2002) J. Cell Biol , vol.157 , pp. 1071-1081
    • Fujiwara, T.1    Ritchie, K.2    Murakoshi, H.3    Jacobson, K.4    Kusumi, A.5
  • 12
    • 20144384755 scopus 로고    scopus 로고
    • An automated method to quantify and visualize colocalized fluorescent signals
    • Jaskolski, F., Mulle, C. and Manzoni, O. J. (2005) An automated method to quantify and visualize colocalized fluorescent signals. J. Neurosci. Methods 146; 42-49.
    • (2005) J. Neurosci. Methods , vol.146 , pp. 42-49
    • Jaskolski, F.1    Mulle, C.2    Manzoni, O.J.3
  • 14
    • 20544457766 scopus 로고    scopus 로고
    • Fluorescence imaging for monitoring the colocalization of two single molecules in living cells
    • Koyama-Honda, I., Ritchie, K., Fujiwara, T., Iino, R., Murakoshi, H., Kasai, R. S. and Kusumi, A. (2005) Fluorescence imaging for monitoring the colocalization of two single molecules in living cells. Biophys. J. 88; 2126-2136.
    • (2005) Biophys. J , vol.88 , pp. 2126-2136
    • Koyama-Honda, I.1    Ritchie, K.2    Fujiwara, T.3    Iino, R.4    Murakoshi, H.5    Kasai, R.S.6    Kusumi, A.7
  • 15
    • 0036433021 scopus 로고    scopus 로고
    • Deconvolution improves colocalization analysis of multiple fluorochromes in 3D confocal data sets more than filtering techniques
    • Landmann, L. (2002) Deconvolution improves colocalization analysis of multiple fluorochromes in 3D confocal data sets more than filtering techniques. J. Microsc. 208; 134-147.
    • (2002) J. Microsc , vol.208 , pp. 134-147
    • Landmann, L.1
  • 16
    • 4344583460 scopus 로고    scopus 로고
    • Colocalization analysis yields superior results after image restoration
    • Landmann, L. and Marbet, P. (2004) Colocalization analysis yields superior results after image restoration. Microsc. Res. Tech. 64; 103-112.
    • (2004) Microsc. Res. Tech , vol.64 , pp. 103-112
    • Landmann, L.1    Marbet, P.2
  • 17
    • 20944434932 scopus 로고    scopus 로고
    • Automated image analysis methods for 3-D quantification of the neurovascular unit from multichannel confocal microscope images
    • Lin, G., Bjornsson, C. S., Smith, K. L., Abdul-Karim, M. A., Turner, J. N., Shain, W. and Roysam, B. (2005) Automated image analysis methods for 3-D quantification of the neurovascular unit from multichannel confocal microscope images. Cytometry 66; 9-23.
    • (2005) Cytometry , vol.66 , pp. 9-23
    • Lin, G.1    Bjornsson, C.S.2    Smith, K.L.3    Abdul-Karim, M.A.4    Turner, J.N.5    Shain, W.6    Roysam, B.7
  • 18
    • 0346057912 scopus 로고    scopus 로고
    • Single-molecule imaging of the H-ras membrane-anchor reveals domains in the cytoplasmic leaflet of the cell membrane
    • Lommerse, P. H., Blab, G. A., Cognet, L., Harms, G. S., Snaar-Jagalska, B. E., Spaink, H. P. and Schmidt, T. (2004) Single-molecule imaging of the H-ras membrane-anchor reveals domains in the cytoplasmic leaflet of the cell membrane. Biophys. J. 86; 609-616.
    • (2004) Biophys. J , vol.86 , pp. 609-616
    • Lommerse, P.H.1    Blab, G.A.2    Cognet, L.3    Harms, G.S.4    Snaar-Jagalska, B.E.5    Spaink, H.P.6    Schmidt, T.7
  • 19
    • 0027418205 scopus 로고
    • Measurement of co-localization of objects in dual-colour confocal images
    • Manders, E. M. M., Verbeek, F. J. and Aten, J. A. (1993) Measurement of co-localization of objects in dual-colour confocal images. J. Microsc. 169; 375-382.
    • (1993) J. Microsc , vol.169 , pp. 375-382
    • Manders, E.M.M.1    Verbeek, F.J.2    Aten, J.A.3
  • 20
    • 34548703311 scopus 로고    scopus 로고
    • Media Cybernetics, I. (2002) Image-Pro Plus Application Note #1: Colocalization of fluorescent probes.
    • Media Cybernetics, I. (2002) Image-Pro Plus Application Note #1: Colocalization of fluorescent probes.
  • 21
    • 29944435174 scopus 로고    scopus 로고
    • Seeing is believing? A beginners' guide to practical pitfalls in image acquisition
    • North, A. J. (2006) Seeing is believing? A beginners' guide to practical pitfalls in image acquisition. J. Cell Biol. 172; 9-18.
    • (2006) J. Cell Biol , vol.172 , pp. 9-18
    • North, A.J.1
  • 24
    • 0347695020 scopus 로고    scopus 로고
    • Physical and functional interaction of Acyl-CoA-binding protein with hepatocyte nuclear factor-4 alpha
    • Petrescu, A. D., Payne, H. R., Boedecker, A., Chao, H., Hertz, R., Bar-Tana, J., Schroeder, F. and Kier, A. B. (2003) Physical and functional interaction of Acyl-CoA-binding protein with hepatocyte nuclear factor-4 alpha. J. Biol. Chem. 278; 51813-51824.
    • (2003) J. Biol. Chem , vol.278 , pp. 51813-51824
    • Petrescu, A.D.1    Payne, H.R.2    Boedecker, A.3    Chao, H.4    Hertz, R.5    Bar-Tana, J.6    Schroeder, F.7    Kier, A.B.8
  • 25
    • 24144432205 scopus 로고    scopus 로고
    • Caveolin-3 is adjacent to a group of extradyadic ryanodine receptors
    • Scriven, D. R., Klimek, A., Asghari, P., Bellve, K. and Moore, E. D. (2005) Caveolin-3 is adjacent to a group of extradyadic ryanodine receptors. Biophys. J. 89; 1893-1901.
    • (2005) Biophys. J , vol.89 , pp. 1893-1901
    • Scriven, D.R.1    Klimek, A.2    Asghari, P.3    Bellve, K.4    Moore, E.D.5
  • 26
    • 0025823906 scopus 로고
    • The point spread function of confocal microscope: Its measurement and use in deconvolution
    • Shaw, P. and Rawlins, D. J. (1991) The point spread function of confocal microscope: its measurement and use in deconvolution. J. Microsc. 163; 151-165.
    • (1991) J. Microsc , vol.163 , pp. 151-165
    • Shaw, P.1    Rawlins, D.J.2
  • 27
    • 0034998170 scopus 로고    scopus 로고
    • Multicolor imaging: The important question of co-localization
    • Smallcombe, A. (2001) Multicolor imaging: the important question of co-localization. BioTechniques 30; 1240-1242, 1244-1246.
    • (2001) BioTechniques , vol.30
    • Smallcombe, A.1
  • 28
    • 0029792458 scopus 로고    scopus 로고
    • Endotoxin stimulates hydrogen peroxide detoxifying activity in rat hepatic endothelial cells
    • Spolarics, Z., Stein, D. S. and Garcia, Z. C. (1996) Endotoxin stimulates hydrogen peroxide detoxifying activity in rat hepatic endothelial cells. Hepatology 24; 691-696.
    • (1996) Hepatology , vol.24 , pp. 691-696
    • Spolarics, Z.1    Stein, D.S.2    Garcia, Z.C.3
  • 29
    • 33745209452 scopus 로고    scopus 로고
    • Focal adhesions in (myo)fibroblasts scaffold adenylyl cyclase with phosphorylated caveolin
    • Swaney, J. S., Patel, H. H., Yokoyama, U., Head, B. P., Roth, D. M. and Insel, P. A. (2006) Focal adhesions in (myo)fibroblasts scaffold adenylyl cyclase with phosphorylated caveolin. J. Biol. Chem. 281; 17173-17179.
    • (2006) J. Biol. Chem , vol.281 , pp. 17173-17179
    • Swaney, J.S.1    Patel, H.H.2    Yokoyama, U.3    Head, B.P.4    Roth, D.M.5    Insel, P.A.6
  • 30
    • 33746806219 scopus 로고    scopus 로고
    • Role of 12-lipoxygenase in volatile anesthetic-induced delayed preconditioning in mice
    • Tsutsumi, Y. M., Patel, H. H., Huang, D. and Roth, D. M. (2006) Role of 12-lipoxygenase in volatile anesthetic-induced delayed preconditioning in mice. Am. J. Physiol. Heart Circ. Physiol. 291; H979-983.
    • (2006) Am. J. Physiol. Heart Circ. Physiol , vol.291
    • Tsutsumi, Y.M.1    Patel, H.H.2    Huang, D.3    Roth, D.M.4
  • 32
    • 4544244197 scopus 로고    scopus 로고
    • Dynamics of PAF-induced conjunctivitis reveals differential expression of PAF receptor by macrophages and eosinophils in the rat
    • Zinchuk, O., Fukushima, A. and Hangstefer, E. (2004) Dynamics of PAF-induced conjunctivitis reveals differential expression of PAF receptor by macrophages and eosinophils in the rat. Cell Tissue Res. 317; 265-277.
    • (2004) Cell Tissue Res , vol.317 , pp. 265-277
    • Zinchuk, O.1    Fukushima, A.2    Hangstefer, E.3
  • 33
    • 25444446396 scopus 로고    scopus 로고
    • Direct action of platelet activating factor (PAF) induces eosinophil accumulation and enhances expression of PAF receptors in conjunctivitis
    • Zinchuk, O., Fukushima, A., Zinchuk, V., Fukata, K. and Ueno, H. (2005) Direct action of platelet activating factor (PAF) induces eosinophil accumulation and enhances expression of PAF receptors in conjunctivitis. Mol. Vis. 11; 114-123.
    • (2005) Mol. Vis , vol.11 , pp. 114-123
    • Zinchuk, O.1    Fukushima, A.2    Zinchuk, V.3    Fukata, K.4    Ueno, H.5
  • 34
    • 23744470316 scopus 로고    scopus 로고
    • Experimental LPS-induced cholestasis alters subcellular distribution and affects colocalization of Mrp2 and Bsep proteins: A quantitative colocalization study
    • Zinchuk, V., Zinchuk, O. and Okada, T. (2005) Experimental LPS-induced cholestasis alters subcellular distribution and affects colocalization of Mrp2 and Bsep proteins: a quantitative colocalization study. Microsc. Res. Tech. 67; 65-70.
    • (2005) Microsc. Res. Tech , vol.67 , pp. 65-70
    • Zinchuk, V.1    Zinchuk, O.2    Okada, T.3


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