-
1
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25: 3389-3402
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
2
-
-
0033649092
-
Nitric oxide production by pre-implantation embryos in response to embryotoxic factors
-
Athanassakis I, Aifantis I, Baritakis S, Farmakiotis V, Koumantakis E, Vassiliadis S (2000) Nitric oxide production by pre-implantation embryos in response to embryotoxic factors. Cell Physiol Biochem 10:169-176
-
(2000)
Cell Physiol Biochem
, vol.10
, pp. 169-176
-
-
Athanassakis, I.1
Aifantis, I.2
Baritakis, S.3
Farmakiotis, V.4
Koumantakis, E.5
Vassiliadis, S.6
-
3
-
-
0036144048
-
DNA methylation patterns and epigenetic memory
-
Bird A (2002) DNA methylation patterns and epigenetic memory. Genes Dev 16: 6-21
-
(2002)
Genes Dev
, vol.16
, pp. 6-21
-
-
Bird, A.1
-
4
-
-
0018289345
-
Methylated and unmethylated DNA compartments in the sea urchin genome
-
Bird AP, Taggart MH, Smith BA (1979) Methylated and unmethylated DNA compartments in the sea urchin genome. Cell 17: 889-901
-
(1979)
Cell
, vol.17
, pp. 889-901
-
-
Bird, A.P.1
Taggart, M.H.2
Smith, B.A.3
-
5
-
-
0033747645
-
Identification and developmental expression of three Distal-less homeobox containing genes in the ascidian Ciona intestinalis
-
Caracciolo A, Di Gregorio A, Aniello F, Di Laura R, Branno M (2000) Identification and developmental expression of three Distal-less homeobox containing genes in the ascidian Ciona intestinalis. Mech Dev 99: 173-176
-
(2000)
Mech Dev
, vol.99
, pp. 173-176
-
-
Caracciolo, A.1
Di Gregorio, A.2
Aniello, F.3
Di Laura, R.4
Branno, M.5
-
6
-
-
0036337726
-
Tail regression in Ciona intestinalis (Prochordate) involves a caspase-dependent apoptosis event associated with ERK activation
-
Chambon JP, Soule J, Pomies P, Fort P, Sahuquet A, Alexandre D, Mangeat PH, Baghdiguian S (2002) Tail regression in Ciona intestinalis (Prochordate) involves a caspase-dependent apoptosis event associated with ERK activation. Development 129: 3105-3114
-
(2002)
Development
, vol.129
, pp. 3105-3114
-
-
Chambon, J.P.1
Soule, J.2
Pomies, P.3
Fort, P.4
Sahuquet, A.5
Alexandre, D.6
Mangeat, P.H.7
Baghdiguian, S.8
-
7
-
-
0023277545
-
Single-step method ot RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction
-
Chomczynski P, Sacchi N (1987) Single-step method ot RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction. Anal Biochem 162: 156-159
-
(1987)
Anal Biochem
, vol.162
, pp. 156-159
-
-
Chomczynski, P.1
Sacchi, N.2
-
8
-
-
0033135285
-
Eukaryotic DNA methylation as an evolutionary device
-
Colot V, Rossignol JL (1999) Eukaryotic DNA methylation as an evolutionary device. BioEssays 21: 402-411
-
(1999)
BioEssays
, vol.21
, pp. 402-411
-
-
Colot, V.1
Rossignol, J.L.2
-
9
-
-
0031055201
-
Characterization of a notochord-specific enhancer from the Brachyury promoter region of the ascidian, Ciona intestinalis
-
Corbo JC, Levine M, Zeller RW (1997) Characterization of a notochord-specific enhancer from the Brachyury promoter region of the ascidian, Ciona intestinalis. Development 124: 589-602
-
(1997)
Development
, vol.124
, pp. 589-602
-
-
Corbo, J.C.1
Levine, M.2
Zeller, R.W.3
-
10
-
-
2242464840
-
The draft genome of Ciona intestinalis: Insights into chordate and vertebrate origins
-
Dehal P, Satou Y, Campbell RK, et al. (2002) The draft genome of Ciona intestinalis: insights into chordate and vertebrate origins. Science 298: 2157-2167
-
(2002)
Science
, vol.298
, pp. 2157-2167
-
-
Dehal, P.1
Satou, Y.2
Campbell, R.K.3
-
11
-
-
0031903097
-
The Snail represser establishes a muscle/notochord boundary in the Ciona embryo
-
Fujiwara S, Corbo JC, Levine M (1998) The Snail represser establishes a muscle/notochord boundary in the Ciona embryo. Development 125: 2511-2520
-
(1998)
Development
, vol.125
, pp. 2511-2520
-
-
Fujiwara, S.1
Corbo, J.C.2
Levine, M.3
-
12
-
-
33846044249
-
Microarray analysis of zygotic expression of transcription factor genes and cell signaling molecule genes in early Ciona intestinalis embryos
-
Hamaguchi M, Fujie M, Noda T, Satoh N (2007) Microarray analysis of zygotic expression of transcription factor genes and cell signaling molecule genes in early Ciona intestinalis embryos. Dev Growth Differ 49: 27-37
-
(2007)
Dev Growth Differ
, vol.49
, pp. 27-37
-
-
Hamaguchi, M.1
Fujie, M.2
Noda, T.3
Satoh, N.4
-
13
-
-
29244449302
-
Shroom regulates epithelial cell shape via the apical positioning of an actomyosin network
-
Hildebrand JD (2005) Shroom regulates epithelial cell shape via the apical positioning of an actomyosin network. J Cell Sci 118: 5191-5203
-
(2005)
J Cell Sci
, vol.118
, pp. 5191-5203
-
-
Hildebrand, J.D.1
-
14
-
-
0141749405
-
Structure and function of desmosomal proteins and their role in development and disease
-
Huber O (2003) Structure and function of desmosomal proteins and their role in development and disease. Cell Mol Life Sci 60: 1872-1890
-
(2003)
Cell Mol Life Sci
, vol.60
, pp. 1872-1890
-
-
Huber, O.1
-
15
-
-
6344248544
-
Ciona intestinalis Hox gene cluster: Its dispersed structure and residual colinear expression in development
-
Ikuta T, Yoshida N, Satoh N, Saiga H (2004) Ciona intestinalis Hox gene cluster: its dispersed structure and residual colinear expression in development. Proc Natl Acad Scii USA 101: 15118-15123
-
(2004)
Proc Natl Acad Scii USA
, vol.101
, pp. 15118-15123
-
-
Ikuta, T.1
Yoshida, N.2
Satoh, N.3
Saiga, H.4
-
16
-
-
4544303883
-
Gene expression profiles of transcription factors and signaling molecules in the ascidian embryo: Towards a comprehensive understanding of gene networks
-
Imai KS, Hino K, Yagi K, Satoh N, Satou Y (2004) Gene expression profiles of transcription factors and signaling molecules in the ascidian embryo: towards a comprehensive understanding of gene networks. Development 131: 4047-4058
-
(2004)
Development
, vol.131
, pp. 4047-4058
-
-
Imai, K.S.1
Hino, K.2
Yagi, K.3
Satoh, N.4
Satou, Y.5
-
17
-
-
33744458441
-
Regulatory blueprint for a chordate embryo
-
Imai KS, Levine M, Satoh N, Satou Y (2006) Regulatory blueprint for a chordate embryo. Science 312: 1183-1187
-
(2006)
Science
, vol.312
, pp. 1183-1187
-
-
Imai, K.S.1
Levine, M.2
Satoh, N.3
Satou, Y.4
-
18
-
-
0032870876
-
EST analysis of gene expression in early cleavage-stage sea urchin embryos
-
Lee Y-H, Huang GM, Cameron RA, Graham G, Davidson EH, Hood L, Britten RJ (1999) EST analysis of gene expression in early cleavage-stage sea urchin embryos. Development 126: 3857-3867
-
(1999)
Development
, vol.126
, pp. 3857-3867
-
-
Lee, Y.-H.1
Huang, G.M.2
Cameron, R.A.3
Graham, G.4
Davidson, E.H.5
Hood, L.6
Britten, R.J.7
-
19
-
-
33745947286
-
Current insights into the formation and breakdown of hemidesmosomes
-
Litjens SH, de Pereda JM, Sonnenberg A (2006) Current insights into the formation and breakdown of hemidesmosomes. Trends Cell Biol 16: 376-383
-
(2006)
Trends Cell Biol
, vol.16
, pp. 376-383
-
-
Litjens, S.H.1
de Pereda, J.M.2
Sonnenberg, A.3
-
20
-
-
0034735780
-
DNA methylation in Drosophila melanogaster
-
Lyko F, Ramsahoye BH, Jaenisch R (2000) DNA methylation in Drosophila melanogaster. Nature 408: 538-540
-
(2000)
Nature
, vol.408
, pp. 538-540
-
-
Lyko, F.1
Ramsahoye, B.H.2
Jaenisch, R.3
-
21
-
-
0034839004
-
Isolation and characterization of genes that are expressed during Ciona intestinalis metamorphosis
-
Nakayama A, Satou Y, Satoh N (2001) Isolation and characterization of genes that are expressed during Ciona intestinalis metamorphosis. Dev Genes Evol 211: 184-189
-
(2001)
Dev Genes Evol
, vol.211
, pp. 184-189
-
-
Nakayama, A.1
Satou, Y.2
Satoh, N.3
-
22
-
-
34548641910
-
Cytidine analogs in ascidian embryonic development
-
Puccia E, Granno M, Tosi L, Villa L, Ortolani G (1986) Cytidine analogs in ascidian embryonic development. Acta Embryol Morphol Exp (NS) 7: 49-63
-
(1986)
Acta Embryol Morphol Exp (NS)
, vol.7
, pp. 49-63
-
-
Puccia, E.1
Granno, M.2
Tosi, L.3
Villa, L.4
Ortolani, G.5
-
23
-
-
0037677689
-
Ciona intestinalis: An emerging model for whole-genome analyses
-
Satoh N, Satou Y, Davidson B, Levine M (2003) Ciona intestinalis: an emerging model for whole-genome analyses. Trends Genet 19: 376-381
-
(2003)
Trends Genet
, vol.19
, pp. 376-381
-
-
Satoh, N.1
Satou, Y.2
Davidson, B.3
Levine, M.4
-
24
-
-
0037012570
-
Ciona intestinalis cDNA projects: Expressed sequence tag analyses and gene expression profiles during embryogenesis
-
Satou Y, Takatori N, Fujiwara S, Nishikata T, Saiga H, Kusakabe T, Shin-i T, Kohara Y, Satoh N (2002) Ciona intestinalis cDNA projects: expressed sequence tag analyses and gene expression profiles during embryogenesis. Gene 287: 83-96
-
(2002)
Gene
, vol.287
, pp. 83-96
-
-
Satou, Y.1
Takatori, N.2
Fujiwara, S.3
Nishikata, T.4
Saiga, H.5
Kusakabe, T.6
Shin-i, T.7
Kohara, Y.8
Satoh, N.9
-
25
-
-
0038150206
-
A genomewide survey of developmentally relevant genes in Ciona intestinalis: I. Genes for bHLH transcription factors
-
Satou Y, Imai KS, Levine M, Kohara Y, Rokhsar D, Satoh N (2003a) A genomewide survey of developmentally relevant genes in Ciona intestinalis: I. Genes for bHLH transcription factors. Dev Genes Evol 213: 213-221
-
(2003)
Dev Genes Evol
, vol.213
, pp. 213-221
-
-
Satou, Y.1
Imai, K.S.2
Levine, M.3
Kohara, Y.4
Rokhsar, D.5
Satoh, N.6
-
26
-
-
0037626990
-
Large scale EST analyses in Ciona intestinalis: Its application as Northern blot analyses
-
Satou Y, Kawashima T, Kohara Y, Satoh N (2003b) Large scale EST analyses in Ciona intestinalis: its application as Northern blot analyses. Dev Genes Evol 213: 314-318
-
(2003)
Dev Genes Evol
, vol.213
, pp. 314-318
-
-
Satou, Y.1
Kawashima, T.2
Kohara, Y.3
Satoh, N.4
-
27
-
-
25444448272
-
An integrated database of the ascidian, Ciona intestinalis: Towards functional genomics
-
Satou Y, Kawashima T, Shoguchi E, Nakayama A, Satoh N (2005) An integrated database of the ascidian, Ciona intestinalis: towards functional genomics. Zool Sci 22: 837-843
-
(2005)
Zool Sci
, vol.22
, pp. 837-843
-
-
Satou, Y.1
Kawashima, T.2
Shoguchi, E.3
Nakayama, A.4
Satoh, N.5
-
28
-
-
0033582623
-
Nonmethylated transposable elements and methylated genes in a chordate genome
-
Simmen MW, Leitgeb S, Charlton J, Jones SJ, Harris BR, Clark VH, Bird A (1999) Nonmethylated transposable elements and methylated genes in a chordate genome. Science 283: 1164-1167
-
(1999)
Science
, vol.283
, pp. 1164-1167
-
-
Simmen, M.W.1
Leitgeb, S.2
Charlton, J.3
Jones, S.J.4
Harris, B.R.5
Clark, V.H.6
Bird, A.7
-
29
-
-
0018581647
-
Multiple new phenotypes induced in 10T1/2 and 3T3 cells treated with 5-azacytidine
-
Taylor SM, Jones PA (1979) Multiple new phenotypes induced in 10T1/2 and 3T3 cells treated with 5-azacytidine. Cell 17: 771-779
-
(1979)
Cell
, vol.17
, pp. 771-779
-
-
Taylor, S.M.1
Jones, P.A.2
-
30
-
-
0032706939
-
Vestiges of a DNA methylation system in Drosophila melanogaster?
-
Tweedie S, Ng HH, Barlow AL, Turner BM, Hendrich B, Bird A (1999) Vestiges of a DNA methylation system in Drosophila melanogaster? Nat Genet 23: 389-390
-
(1999)
Nat Genet
, vol.23
, pp. 389-390
-
-
Tweedie, S.1
Ng, H.H.2
Barlow, A.L.3
Turner, B.M.4
Hendrich, B.5
Bird, A.6
-
31
-
-
32644443814
-
Cell cycle and cell death regulation of neural progenitor cells in the 5-azacytidine (SAzC)-treated developing fetal brain
-
Ueno M, Katayama K, Yamauchi H, Nakayama H, Doi K (2006) Cell cycle and cell death regulation of neural progenitor cells in the 5-azacytidine (SAzC)-treated developing fetal brain. Exp Neurol 198: 154-166
-
(2006)
Exp Neurol
, vol.198
, pp. 154-166
-
-
Ueno, M.1
Katayama, K.2
Yamauchi, H.3
Nakayama, H.4
Doi, K.5
-
32
-
-
10744229558
-
A genomewide survey of developmentally relevant genes in Ciona intestinalis: II. Genes for homeobox transcription factors
-
Wada S, Tokuoka M, Shoguchi E, Kobayashi K, DiGregorio A, Spagnuolo A, Branno M, Kohara Y, Rokhsar D, Levine M, Saiga H, Satoh N, Satou Y (2003) A genomewide survey of developmentally relevant genes in Ciona intestinalis: II. Genes for homeobox transcription factors. Dev Genes Evol 213: 222-234
-
(2003)
Dev Genes Evol
, vol.213
, pp. 222-234
-
-
Wada, S.1
Tokuoka, M.2
Shoguchi, E.3
Kobayashi, K.4
DiGregorio, A.5
Spagnuolo, A.6
Branno, M.7
Kohara, Y.8
Rokhsar, D.9
Levine, M.10
Saiga, H.11
Satoh, N.12
Satou, Y.13
-
33
-
-
23944515753
-
Microarray analysis of localization of maternal transcripts in eggs and early embryos of the ascidian, Ciona intestinalis
-
Yamada L, Kobayashi K, Satou Y, Satoh N (2005) Microarray analysis of localization of maternal transcripts in eggs and early embryos of the ascidian, Ciona intestinalis. Dev Biol 284: 536-550
-
(2005)
Dev Biol
, vol.284
, pp. 536-550
-
-
Yamada, L.1
Kobayashi, K.2
Satou, Y.3
Satoh, N.4
|