Microbial isobutyronitrile utilization under haloalkaline conditions

Applied and Environmental Microbiology

Volumn 73, Issue 17, 2007, Pages 5574-5579

  Sorokin, Dimitry Y ^a,b   Van Pelt, Sander ^b   Tourova, Tatjana P ^a   Muyzer, Gerard ^b  

^a WINOGRADSKY INSTITUTE OF MICROBIOLOGY   (Russian Federation)

^b DELFT UNIVERSITY OF TECHNOLOGY   (Netherlands)

Author keywords

[No Author keywords available]

Indexed keywords

GAMMAPROTEOBACTERIUM; INTRACELLULAR LOCALIZATION; ISOBUTYRONITRILE (IBN); MICROBIAL ISOBUTYRONITRILE; SODA LAKE SEDIMENTS;

AMIDES; CARBOXYLIC ACIDS; CELLS; ENZYMES; HYDROLYSIS; PH; RNA;

BACTERIA;

AMIDE; BUTYRONITRILE; CARBON; CARBOXYLIC ACID; ISOBUTYRIC ACID; ISOBUTYROAMIDE; ISOBUTYRONITRILE; NITRILE; NITROGEN; SODIUM CARBONATE; UNCLASSIFIED DRUG; VITAMIN;

BIODEGRADATION; COMMUNITY COMPOSITION; HALOCLINE; LACUSTRINE DEPOSIT; MICROBIAL ACTIVITY; MICROBIAL COMMUNITY; PH; SCAVENGER;

ACTINOBACTERIA; ALKALINITY; ARTICLE; BACILLUS; BACTERIAL GROWTH; BACTERIAL METABOLISM; BACTERIUM ISOLATE; CARBON SOURCE; CONTROLLED STUDY; ENZYME ACTIVITY; ENZYME LOCALIZATION; GAMMAPROTEOBACTERIA; HYDROLYSIS; LAKE SEDIMENT; MARINOSPIRILLUM; MICROBIAL DEGRADATION; NONHUMAN; NUCLEOTIDE SEQUENCE; PH;

ACTINOBACTERIA; AMIDOHYDROLASES; BACILLUS; CULTURE MEDIA; DNA, BACTERIAL; FRESH WATER; GAMMAPROTEOBACTERIA; GEOLOGIC SEDIMENTS; HYDRO-LYASES; HYDROGEN-ION CONCENTRATION; MOLECULAR SEQUENCE DATA; NITRILES; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA; SODIUM CHLORIDE;

BACILLUS (BACTERIUM); BACTERIA (MICROORGANISMS); MARINOSPIRILLUM;

EID: 34548504785     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/AEM.00342-07     Document Type: Article

References (25)

1. Banerjee, A., R. Sharma, and U. C. Banerjee. 2002. The nitrile-degrading enzymes: current status and future prospects. Appl. Microbiol. Biotechnol. 60:33-44.
2. Blakey, A. J., J. Colby, E. Williams, and C. O'Reilly. 1995. Regio- and stereo-specific nitrile hydrolysis by the nitrile hydratase from Rhodococcus AJ270. FEMS Microbiol. Lett. 129:57-62.
3. Bunch, A. W. 1998. Biotransformation of nitriles by rhodococci. Antonie Leeuwenhoek 74:89-97.
4. De Ley, J., H. Cattoir, and A. Reynaerts. 1970. The quantitative measurement of DNA hybridization from renaturation rates. Eur. J. Biochem. 12:133-142.
5. Duthaler, R. O. 1994. Recent developments in the stereoselective synthesis of a-aminoacids. Tetrahedron 50:1539-1650.
6. Håkansson, K., U. Welander, and B. Mattiasson. 2005. Degradation of acetonitrile through a sequence of microbial reactors. Water Res. 39:648-654.
7. Harper, D. B., and P. A. Gibbs. 1979. Identification of isobutyronitrile and isobutyraldoxime O-methyl ether as volatile microbial catabolites of valine. Biochem. J. 182:609-611.
8. Jones, B. E., W. D. Grant, A. W. Duckworth, and G. G. Owenson. 1998. Microbial diversity of soda lakes. Extremophiles 2:191-200.
9. Kobayashi, M., M. Goda, and S. Shimizu. 2002. Nitrilase catalyzes amide hydrolysis as well as nitrile hydrolysis. Biochem. Biophys. Res. Commun. 253:662-666.
10. Kobayashi, M., and S. Shimizu. 1998. Metalloenzyme nitrile hydratase: structure, regulation and application to biotechnology. Nat. Biotechnol. 16:733-736.
11. Kobayashi, M., and S. Shimizu. 2000. Nitrile hydrolases. Curr. Opin. Chem. Biol. 4:95-102.
12. Kohyama, I., A. Yoshimura, D. Aoshima, T. Yoshida, H. Kawamoto, and T. Nagasawa. 2006. Convenient treatment of acetonitrile-containing wastes using the tandem combination of nitrile hydratase and amidase-producing microorganisms. Appl. Microbiol. Biotechnol. 72:600-606.
13. Layh, N., B. Hirrlinger, A. Stolz, and H.-J. Knackmuss. 1997. Enrichment strategies for nitrile-hydrolysing bacteria. Appl. Microbiol. Biotechnol. 47:668-674.
14. Manolov, T., K. Hakansson, and G. Benoit. 2005. Continuous acetonitrile degradation in a packed-bed bioreactor. Appl. Microbiol. Biotechnol. 66:567-574.
15. Marmur, J. 1961. A procedure for isolation of DNA from microorganisms. J. Mol. Biol. 3:208-214.
16. 12-Bedürfnis phototropher Schwefelbakterien Schwefelbacterien. Arch. Microbiol. 55:245-256.
17. Podar, M., J. R. Eads, and T. H. Richardson. 2005. Evolution of a microbial nitrilase gene family: a comparative and environmental genomics study. BMC Evol. Biol. 5:42.
18. Satomi, M., B. Kimura, M. Hayashi, Y. Shouzen, M. Okuzumi, and T. Fujii. 1997. Marinospirillum gen. nov., with descriptions of Marinospirillum megaterium sp. nov., isolated from kusaya gravy, and transfer of Oceanospirillum minutulum to Marinospirillum minutulum comb. nov. Int. J. Syst. Bacteriol. 48:1341-1348.
19. Sorokin, D. Y. 2005. Is there a limit for high-pH life? Int. J. Syst. Evol. Microbiol. 55:1405-1406.
20. Sorokin, D. Y., and J. G. Kuenen. 2005. Chemolithotrophic haloalkaliphiles from soda lakes. FEMS Microbiol. Ecol. 52:287-295.
21. Sorokin, D. Y., S. van Pelt, T. P. Tourova, S. Takaichi, and G. Muyzer. 2007. Acetonitrile degradation under haloalkaline conditions by Natronocella acetinitrilica gen. nov., sp. nov. Microbiology 153:1157-1164.
22. Van de Peer, Y., and R. De Wachter. 1994. TREECON for Windows: a software package for the construction and drawing of evolutionary trees for the Microsoft Windows environment. Comput. Appl. Biosci. 10:569-570.
23. Vetter, J. 2000. Plant cyanogenic glycosides. Toxicon 38:11-36.
24. Weatherburn, M. V. 1967. Phenol-hypochlorite reaction for determination of ammonia. Anal. Chem. 39:971-974.
25. Zavarzin, G. A., T. N. Zhilina, and V. V. Kevbrin. 1999. The alkaliphilic microbial community and its functional diversity. Microbiology 68:503-521.