Physiological and expression analyses of Agrobacterium tumefaciens trxA, encoding thioredoxin

Journal of Bacteriology

Volumn 189, Issue 17, 2007, Pages 6477-6481

  Vattanaviboon, Paiboon ^a   Tanboon, Weerachai ^a   Mongkolsuk, Skorn ^a,b  

^a Chulabhorn Research Institute   (Thailand)

^b MAHIDOL UNIVERSITY   (Thailand)

Author keywords

[No Author keywords available]

Indexed keywords

CUMENE HYDROPEROXIDE; CYTOCHROME C OXIDASE; DIAMIDE; HYDROGEN PEROXIDE; MENADIONE; THIOREDOXIN;

ARTICLE; BACTERIAL GENE; BACTERIAL GROWTH; BACTERIUM CULTURE; BACTERIUM MUTANT; CULTURE MEDIUM; GENE EXPRESSION PROFILING; GENE MUTATION; GROWTH RATE; NONHUMAN; OXIDATIVE STRESS; PHENOTYPE; PRIORITY JOURNAL; PROMOTER REGION; RHIZOBIUM RADIOBACTER; TRXA GENE;

BACTERIAL PROTEINS; BENZENE DERIVATIVES; DIAMIDE; GENE EXPRESSION REGULATION, BACTERIAL; OXIDANTS; RHIZOBIUM RADIOBACTER; THIOREDOXIN; VITAMIN K 3;

AGROBACTERIUM TUMEFACIENS;

EID: 34548485802     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/JB.00623-07     Document Type: Article

References (34)

1. Alexeyev, M. F. 1999. The pKNOCK series of broad-host-range mobilizable suicide vectors for gene knockout and targeted DNA insertion into the chromosome of gram-negative bacteria. BioTechniques 26:824-828.
2. Altschul, S. F., J. C. Wootton, E. M. Gertz, R. Agarwala, A. Morgulis, A. A. Schaffer, and Y. K. Yu. 2005. Protein database searches using compositionally adjusted substitution matrices. FEBS J. 272:5101-5109.
3. Baker, L. M., and L. B. Poole. 2003. Catalytic mechanism of thiol peroxidase from Escherichia coli. Sulfenic acid formation and overoxidation of essential CYS61. J. Biol. Chem. 278:9203-9211.
4. Carmel-Harel, O., and G. Storz. 2000. Roles of the glutathione- and thioredoxin-dependent reduction systems in the Escherichia coli and Saccharomyces cerevisiae responses to oxidative stress. Annu. Rev. Microbiol. 54:439-461.
5. Chen, N. Y., J. J. Zhang, and H. Paulus. 1989. Chromosomal location of the Bacillus subtilis aspartokinase II gene and nucleotide sequence of the adjacent genes homologous to uvrC and trx of Escherichia coli. J. Gen. Microbiol. 135:2931-2940.
6. Chuchue, T., W. Tanboon, B. Prapagdee, J. M. Dubbs, P. Vattanaviboon, and S. Mongkolsuk. 2006. ohrR and ohr are the primary sensor/regulator and protective genes against organic hydroperoxide stress in Agrobacterium tumefaciens. J. Bacteriol. 188:842-851.
7. Eiamphungporn, W., N. Charoenlap, P. Vattanaviboon, and S. Mongkolsuk. 2006. Agrobacterium tumefaciens soxR is involved in superoxide stress protection and also directly regulates superoxide-inducible expression of itself and a target gene. J. Bacteriol. 188:8669-8673.
8. Fabianek, R. A., H. Hennecke, and L. Thony-Meyer. 2000. Periplasmic protein thiol:disulfide oxidoreductases of Escherichia coli. FEMS Microbiol. Rev. 24:303-316.
9. Farr, S. B., and T. Kogoma. 1991. Oxidative stress responses in Escherichia coli and Salmonella typhimurium. Microbiol. Rev. 55:561-585.
10. Goodner, B., G. Hinkle, S. Gattung, N. Miller, M. Blanchard, B. Qurollo, B. S. Goldman, Y. Cao, M. Askenazi, C. Halling, L. Mullin, K. Houmiel, J. Gordon, M. Vaudin, O. Iartchouk, A. Epp, F. Liu, C. Wollam, M. Allinger, D. Doughty, C. Scott, C. Lappas, B. Markelz, C. Flanagan, C. Crowell, J. Gurson, C. Lomo, C. Sear, G. Strub, C. Cielo, and S. Slater. 2001. Genome sequence of the plant pathogen and biotechnology agent Agrobacterium tumefaciens C58. Science 294:2323-2328.
11. Holmgren, A., and M. Bjornstedt. 1995. Thioredoxin and thioredoxin reductase. Methods Enzymol. 252:199-208.
12. Hoog, J. O., H. von Bahr-Lindstrom, S. Josephson, B. J. Wallace, S. R. Kushner, H. Jornvall, and A. Holmgren. 1984. Nucleotide sequence of the thioredoxin gene from Escherichia coli. Biosci. Rep. 4:917-923.
13. Jacobson, J., M. R. Duchen, J. Hothersall, J. B. Clark, and S. J. Heales. 2005. Induction of mitochondrial oxidative stress in astrocytes by nitric oxide precedes disruption of energy metabolism. J. Neurochem. 95:388-395.
14. Jobin, M. P., D. Garmyn, C. Divies, and J. Guzzo. 1999. Expression of the Oenococcus oeni trxA gene is induced by hydrogen peroxide and heat shock. Microbiology 145:1245-1251.
15. Kovach, M. E., P. H. Elzer, D. S. Hill, G. T. Robertson, M. A. Farris, R. M. Roop II, and K. M. Peterson. 1995. Four new derivatives of the broad-host-range cloning vector pBBR1MCS, carrying different antibiotic-resistance cassettes. Gene 166:175-176.
16. 2 from oxidative burst orchestrates the plant hypersensitive disease resistance response. Cell 79:583-593.
17. Li, K., C. Pasternak, E. Hartig, K. Haberzettl, A. Maxwell, and G. Klug. 2004. Thioredoxin can influence gene expression by affecting gyrase activity. Nucleic Acids Res. 32:4563-4575.
18. Li, K., C. Pasternak, and G. Klug. 2003. Expression of the trxA gene for thioredoxin 1 in Rhodobacter sphaeroides during oxidative stress. Arch. Microbiol. 180:484-489.
19. Luo, Z. Q., T. E. Clemente, and S. K. Farrand. 2001. Construction of a derivative of Agrobacterium tumefaciens C58 that does not mutate to tetracycline resistance. Mol. Plant-Microbe Interact. 14:98-103.
20. Miranda-Vizuete, A., A. E. Damdimopoulos, J. Gustafsson, and G. Spyrou. 1997. Cloning, expression, and characterization of a novel Escherichia coli thioredoxin. J. Biol. Chem. 272:30841-30847.
21. Nakjarung, K., S. Mongkolsuk, and P. Vattanaviboon. 2003. The oxyR from Agrobacterium tumefaciens: evaluation of its role in the regulation of catalase and peroxide responses. Biochem. Biophys. Res. Commun. 304:41-47.
22. Prapagdee, B., P. Vattanaviboon, and S. Mongkolsuk. 2004. The role of a bifunctional catalase-peroxidase KatA in protection of Agrobacterium tumefaciens from menadione toxicity. FEMS Microbiol. Lett. 232:217-223.
23. Reid, E., D. J. Eaves, and J. A. Cole. 1998. The CcmE protein from Escherichia coli is a haem-binding protein. FEMS Microbiol. Lett. 166:369-375.
24. Rhee, S. G., H. Z. Chae, and K. Kim. 2005. Peroxiredoxins: a historical overview and speculative preview of novel mechanisms and emerging concepts in cell signaling. Free Radic. Biol. Med. 38:1543-1552.
25. Ritz, D., and J. Beckwith. 2001. Roles of thiol-redox pathways in bacteria. Annu. Rev. Microbiol. 55:21-48.
26. Ritz, D., H. Patel, B. Doan, M. Zheng, F. Aslund, G. Storz, and J. Beckwith. 2000. Thioredoxin 2 is involved in the oxidative stress response in Escherichia coli. J. Biol. Chem. 275:2505-2512.
27. Scharf, C., S. Riethdorf, H. Ernst, S. Engelmann, U. Volker, and M. Hecker. 1998. Thioredoxin is an essential protein induced by multiple stresses in Bacillus subtilis. J. Bacteriol. 180:1869-1877.
28. Swem, D. L., L. R. Swem, A. Setterdahl, and C. E. Bauer. 2005. Involvement of SenC in assembly of cytochrome c oxidase in Rhodobacter capsulatus. J. Bacteriol. 187:8081-8087.
29. Thomashow, L. S., S. Reeves, and M. F. Thomashow. 1984. Crown gall oncogenesis: evidence that a T-DNA gene from the Agrobacterium Ti plasmid pTiA6 encodes an enzyme that catalyzes synthesis of indoleacetic acid. Proc. Natl. Acad. Sci. USA 81:5071-5075.
30. Uziel, O., I. Borovok, R. Schreiber, G. Cohen, and Y. Aharonowitz. 2004. Transcriptional regulation of the Staphylococcus aureus thioredoxin and thioredoxin reductase genes in response to oxygen and disulfide stress. J. Bacteriol. 186:326-334.
31. Vattanaviboon, P., W. Eiamphungporn, and S. Mongkolsuk. 2003. Atypical adaptive and cross-protective responses against peroxide killing in a bacterial plant pathogen, Agrobacterium tumefaciens. Curr. Microbiol. 47:323-326.
32. Wood, D. W., J. C. Setubal, R. Kaul, D. E. Monks, J. P. Kitajima, V. K. Okura, Y. Zhou, L. Chen, G. E. Wood, N. F. Almeida, Jr., L. Woo, Y. Chen, I. T. Paulsen, J. A. Eisen, P. D. Karp, D. Bovee, Sr., P. Chapman, J. Clendenning, G. Deatherage, W. Gillet, C. Grant, T. Kutyavin, R. Levy, M. J. Li, E. McClelland, A. Palmieri, C. Raymond, G. Rouse, C. Saenphimmachak, Z. Wu, P. Romero, D. Gordon, S. Zhang, H. Yoo, Y. Tao, P. Biddle, M. Jung, W. Krespan, M. Perry, B. Gordon-Kamm, L. Liao, S. Kim, C. Hendrick, Z. Y. Zhao, M. Dolan, F. Chumley, S. V. Tingey, J. F. Tomb, M. P. Gordon, M. V. Olson, and E. W. Nester. 2001. The genome of the natural genetic engineer Agrobacterium tumefaciens C58. Science 294:2317-2323.
33. Zeller, T., and G. Klug. 2006. Thioredoxins in bacteria: functions in oxidative stress response and regulation of thioredoxin genes. Naturwissenschaften 93:259-266.
34. Zeller, T., K. Li, and G. Klug. 2006. Expression of the trxC gene of Rhodobacter capsulatus: response to cellular redox status is mediated by the transcriptional regulator OxyR. J. Bacteriol. 188:7689-7695.