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Volumn 1, Issue 5, 2007, Pages 443-452

Effects of cattle husbandry on abundance and activity of methanogenic archaea in upland soils

Author keywords

Diversity; Methane emission; Methyl coenzyme M reductase

Indexed keywords

METHANE;

EID: 34548480492     PISSN: 17517362     EISSN: 17517370     Source Type: Journal    
DOI: 10.1038/ismej.2007.60     Document Type: Article
Times cited : (62)

References (43)
  • 1
    • 0033939897 scopus 로고    scopus 로고
    • Characterisation of microbial consortia in paddy rice soil by phosholipid analysis
    • Bai Q, Gattinger A, Zelles L. (2000). Characterisation of microbial consortia in paddy rice soil by phosholipid analysis. Microb Ecol 39: 273-281.
    • (2000) Microb Ecol , vol.39 , pp. 273-281
    • Bai, Q.1    Gattinger, A.2    Zelles, L.3
  • 2
    • 0025186938 scopus 로고
    • Environmental factors influencing methanogenesis in a shallow anoxic aquifer: A field and laboratory study
    • Beeman RE, Suflita JM. (1990). Environmental factors influencing methanogenesis in a shallow anoxic aquifer: a field and laboratory study. J Ind Microbiol 5: 45-57.
    • (1990) J Ind Microbiol , vol.5 , pp. 45-57
    • Beeman, R.E.1    Suflita, J.M.2
  • 3
    • 0035907183 scopus 로고    scopus 로고
    • Influence of soil properties on the aggregation of some Mediterranean soils and the use of aggregate size and stability as land degradation indicators
    • Boix-Fayos C, Calvo-Cases A, Imeson AC. (2001). Influence of soil properties on the aggregation of some Mediterranean soils and the use of aggregate size and stability as land degradation indicators. Catene 44: 47-67.
    • (2001) Catene , vol.44 , pp. 47-67
    • Boix-Fayos, C.1    Calvo-Cases, A.2    Imeson, A.C.3
  • 4
    • 33751345059 scopus 로고    scopus 로고
    • The methane sink associated to soils of natural and agricultural ecosystems in Italy
    • Castaldi S, Costantini M, Cenciarelli P, Ciccioli P, Valentini R. (2007). The methane sink associated to soils of natural and agricultural ecosystems in Italy. Chemosphere 66: 723-729.
    • (2007) Chemosphere , vol.66 , pp. 723-729
    • Castaldi, S.1    Costantini, M.2    Cenciarelli, P.3    Ciccioli, P.4    Valentini, R.5
  • 5
    • 0035210987 scopus 로고    scopus 로고
    • Methane oxidation and production activity in soils from natural and agricultrual ecosystems
    • Chan ASK, Parkin TB. (2001). Methane oxidation and production activity in soils from natural and agricultrual ecosystems. J Environ Qual 301: 1896-1903.
    • (2001) J Environ Qual , vol.301 , pp. 1896-1903
    • Chan, A.S.K.1    Parkin, T.B.2
  • 6
    • 0028599360 scopus 로고
    • Measurement of nitrous oxide emissions from fertilized grassland using closed chambers
    • Clayton H, Arah JRM, Smith KA. (1994). Measurement of nitrous oxide emissions from fertilized grassland using closed chambers. J Geophys Res 99: 599-607.
    • (1994) J Geophys Res , vol.99 , pp. 599-607
    • Clayton, H.1    Arah, J.R.M.2    Smith, K.A.3
  • 7
    • 0024287227 scopus 로고
    • The final step in methane formation. Investigations with highly purified methyl-CoM reductase (component C) from Methanobacterium thermoautotrophicum (strain Marburg)
    • Ellermann J, Hedderich R, Bocher R, Thauer RK. (1988). The final step in methane formation. Investigations with highly purified methyl-CoM reductase (component C) from Methanobacterium thermoautotrophicum (strain Marburg). Eur J Biochem 172: 669-677.
    • (1988) Eur J Biochem , vol.172 , pp. 669-677
    • Ellermann, J.1    Hedderich, R.2    Bocher, R.3    Thauer, R.K.4
  • 8
    • 34548498092 scopus 로고    scopus 로고
    • Entwicklung und Anwendung von Methoden zur Charakterisierung von mikrobiellen Gemeischaften in oxischen und Bodenökosystem anhand von Phospholipid-Profilen
    • Technische Universität München: Munich, p
    • Gattinger A. (2001). Entwicklung und Anwendung von Methoden zur Charakterisierung von mikrobiellen Gemeischaften in oxischen und Bodenökosystem anhand von Phospholipid-Profilen. Fakultät Wissenschaftszentrum Weihehstephan ßr Ernährung, Landnutzung und Umwelt. Technische Universität München: Munich, p 147.
    • (2001) Fakultät Wissenschaftszentrum Weihehstephan ßr Ernährung, Landnutzung und Umwelt , pp. 147
    • Gattinger, A.1
  • 9
    • 33846982922 scopus 로고    scopus 로고
    • Traditional cattle manure application determines abundance, diversity and activity of methanogenic Archaea in arable European soil
    • Gattinger A, Hofle MG, Schloter M, Embacher A, Bohme F, Munch JC et al. (2007). Traditional cattle manure application determines abundance, diversity and activity of methanogenic Archaea in arable European soil. Environ Microbiol 9: 612-624.
    • (2007) Environ Microbiol , vol.9 , pp. 612-624
    • Gattinger, A.1    Hofle, M.G.2    Schloter, M.3    Embacher, A.4    Bohme, F.5    Munch, J.C.6
  • 11
    • 0142010407 scopus 로고    scopus 로고
    • Microbial community structure varies in different soil zones of a potato field
    • Gattinger A, Ruser R, Schloter M, Munch JC. (2002). Microbial community structure varies in different soil zones of a potato field. J Plant Nutr Soil Sci 165: 421-428.
    • (2002) J Plant Nutr Soil Sci , vol.165 , pp. 421-428
    • Gattinger, A.1    Ruser, R.2    Schloter, M.3    Munch, J.C.4
  • 12
    • 0034468557 scopus 로고    scopus 로고
    • Rapid method for coextraction of DNA and RNA from natural environments for analysis of ribosomal DNA- and rRNA-based microbial community composition
    • Griffiths RI, Whiteley AS, O'Donnell AG, Bailey MJ. (2000). Rapid method for coextraction of DNA and RNA from natural environments for analysis of ribosomal DNA- and rRNA-based microbial community composition. Appl Environ Microbiol 66: 5488-5491.
    • (2000) Appl Environ Microbiol , vol.66 , pp. 5488-5491
    • Griffiths, R.I.1    Whiteley, A.S.2    O'Donnell, A.G.3    Bailey, M.J.4
  • 13
    • 34147148069 scopus 로고    scopus 로고
    • Water-soluble organic matter and biological activity of a degraded soil amended with pig slurry
    • in press
    • Hernández D, Fernández JM, Plaza C, Polo A. (2007). Water-soluble organic matter and biological activity of a degraded soil amended with pig slurry. Sci Total Environ (in press).
    • (2007) Sci Total Environ
    • Hernández, D.1    Fernández, J.M.2    Plaza, C.3    Polo, A.4
  • 14
    • 0027331034 scopus 로고
    • Long-term effects of nitrogen fertilization on methane oxidation in soil of the broadbalk wheat experiment
    • Hütsch BW, Webster CP, Powlson DS. (1993). Long-term effects of nitrogen fertilization on methane oxidation in soil of the broadbalk wheat experiment. Soil Biol Biochem 25: 1307-1310.
    • (1993) Soil Biol Biochem , vol.25 , pp. 1307-1310
    • Hütsch, B.W.1    Webster, C.P.2    Powlson, D.S.3
  • 15
    • 0028164573 scopus 로고
    • Methane oxidation in soil as affected by land use, soil pH and N fertilization
    • Hütsch BW, Webster CP, Powlson DS. (1994). Methane oxidation in soil as affected by land use, soil pH and N fertilization. Soil Biol Biochem 26: 1613-1622.
    • (1994) Soil Biol Biochem , vol.26 , pp. 1613-1622
    • Hütsch, B.W.1    Webster, C.P.2    Powlson, D.S.3
  • 16
    • 0003472929 scopus 로고
    • Prentice Hall: Englewood Cliffs: New York
    • Jackson ML. (1958). Soil Chemical Analysis. Prentice Hall: Englewood Cliffs: New York.
    • (1958) Soil Chemical Analysis
    • Jackson, M.L.1
  • 18
    • 34548479471 scopus 로고    scopus 로고
    • Detection of methanogenic Archaea in peat: Comparison of PCR primers targeting the mcrA gene
    • Juottonen H, Galand PE, Yrjälä K. (2006). Detection of methanogenic Archaea in peat: comparison of PCR primers targeting the mcrA gene. Res Microbiol 15: 914-921.
    • (2006) Res Microbiol , vol.15 , pp. 914-921
    • Juottonen, H.1    Galand, P.E.2    Yrjälä, K.3
  • 19
    • 0035206819 scopus 로고    scopus 로고
    • Molecular analyses of methyl-coenzyme M reductase a-subunit (mcrA) genes in rice field soil and enrichment cultures reveal the methanogenic phenotype of a novel archaeal lineage
    • Lueders T, Chin K-J, Conrad R, Friedrich M. (2001). Molecular analyses of methyl-coenzyme M reductase a-subunit (mcrA) genes in rice field soil and enrichment cultures reveal the methanogenic phenotype of a novel archaeal lineage. Environ Microbiol 3: 194-204.
    • (2001) Environ Microbiol , vol.3 , pp. 194-204
    • Lueders, T.1    Chin, K.-J.2    Conrad, R.3    Friedrich, M.4
  • 20
    • 0036856362 scopus 로고    scopus 로고
    • The mcrA gene as an alternative to 16S rRNA in the phylogenetic analysis of methanogen populations in ladfill
    • Luton PE, Wayne JM, Sharp RJ, Riley PW. (2002). The mcrA gene as an alternative to 16S rRNA in the phylogenetic analysis of methanogen populations in ladfill. Microbiology 148: 3521-3530.
    • (2002) Microbiology , vol.148 , pp. 3521-3530
    • Luton, P.E.1    Wayne, J.M.2    Sharp, R.J.3    Riley, P.W.4
  • 21
    • 0000022353 scopus 로고
    • Modification of infiltration rates in an organic-amended irrigated soil
    • Martens DA, Frankenberger WT. (1992). Modification of infiltration rates in an organic-amended irrigated soil. Agron J 84: 707-717.
    • (1992) Agron J , vol.84 , pp. 707-717
    • Martens, D.A.1    Frankenberger, W.T.2
  • 22
    • 20444463156 scopus 로고    scopus 로고
    • Animal treading stimulates denitrification in soil under pasture
    • Menneer JC, Ledgard S, McLay C, Silverster W. (2005). Animal treading stimulates denitrification in soil under pasture. Soil Biol Biochem 37: 1625-1629.
    • (2005) Soil Biol Biochem , vol.37 , pp. 1625-1629
    • Menneer, J.C.1    Ledgard, S.2    McLay, C.3    Silverster, W.4
  • 23
    • 0025919391 scopus 로고
    • Methane and nitrous oxide fluxes in native, fertilized and cultivated grasslands
    • Mosier A, Schimel D, Valentine D, Bronson K, Parton W. (1991). Methane and nitrous oxide fluxes in native, fertilized and cultivated grasslands. Nature 350: 330-332.
    • (1991) Nature , vol.350 , pp. 330-332
    • Mosier, A.1    Schimel, D.2    Valentine, D.3    Bronson, K.4    Parton, W.5
  • 25
    • 0035665165 scopus 로고    scopus 로고
    • Technical and policy aspects of strategies to decrease greenhouse gas emissions from agriculture
    • Oenema O, Velthof G, Kuikman P. (2001). Technical and policy aspects of strategies to decrease greenhouse gas emissions from agriculture. Nutr Cycl Agroecosys 60: 301-315.
    • (2001) Nutr Cycl Agroecosys , vol.60 , pp. 301-315
    • Oenema, O.1    Velthof, G.2    Kuikman, P.3
  • 26
    • 1842575820 scopus 로고    scopus 로고
    • Application of ARDRA and PLFA analysis in characterizing the bacterial communities of the food, gut and excrement of saprophagous larvae of Penthetria holosericea (Diptera: Bibionidae): a pilot study
    • Oravecz O, Elhottovás D, Kristufek V, Sustr V, Frouz J, Triska J et al. (2004). Application of ARDRA and PLFA analysis in characterizing the bacterial communities of the food, gut and excrement of saprophagous larvae of Penthetria holosericea (Diptera: Bibionidae): a pilot study. Folia Microbiol (Praha) 49: 83-93.
    • (2004) Folia Microbiol (Praha) , vol.49 , pp. 83-93
    • Oravecz, O.1    Elhottovás, D.2    Kristufek, V.3    Sustr, V.4    Frouz, J.5    Triska, J.6
  • 27
    • 0033198136 scopus 로고    scopus 로고
    • Organic matter quality and structural stability of a Black Chernozemic soil under different manure and tillage practices
    • Pare T, Dinel H, Moulin AP, Townley-Smith L. (1999). Organic matter quality and structural stability of a Black Chernozemic soil under different manure and tillage practices. Geoderma 91: 311-326.
    • (1999) Geoderma , vol.91 , pp. 311-326
    • Pare, T.1    Dinel, H.2    Moulin, A.P.3    Townley-Smith, L.4
  • 28
    • 33847632041 scopus 로고    scopus 로고
    • Microbial activity in pig slurry-amended soils under aerobic incubation
    • Plaza C, García-Gil JC, Polo A. (2007). Microbial activity in pig slurry-amended soils under aerobic incubation. Biodegradation 18: 159-165.
    • (2007) Biodegradation , vol.18 , pp. 159-165
    • Plaza, C.1    García-Gil, J.C.2    Polo, A.3
  • 29
    • 0034782286 scopus 로고    scopus 로고
    • Archaeal community structures in rice soils from different geographical regions before and after initiation of methane production
    • Ramakrishnan B, Lueders T, Dunfield PF, Conrad R, Friedrich MW. (2001). Archaeal community structures in rice soils from different geographical regions before and after initiation of methane production. FEMS Microbiol Ecol 37: 175-186.
    • (2001) FEMS Microbiol Ecol , vol.37 , pp. 175-186
    • Ramakrishnan, B.1    Lueders, T.2    Dunfield, P.F.3    Conrad, R.4    Friedrich, M.W.5
  • 30
    • 0028162327 scopus 로고
    • Mechanistic analysis of ammonium inhibition of atmospheric methane consumption in forest soils
    • Schnell S, King GM. (1994). Mechanistic analysis of ammonium inhibition of atmospheric methane consumption in forest soils. Appl Environ Microbiol 60: 3514-3521.
    • (1994) Appl Environ Microbiol , vol.60 , pp. 3514-3521
    • Schnell, S.1    King, G.M.2
  • 31
    • 33847334185 scopus 로고    scopus 로고
    • Quantification of functional genes from procaryotes in soil by PCR
    • Sharma S, Radl V, Hai B, Kloos K, Fuka M, Engel M et al. (2007). Quantification of functional genes from procaryotes in soil by PCR. J Microbiol Methods 68: 445-452.
    • (2007) J Microbiol Methods , vol.68 , pp. 445-452
    • Sharma, S.1    Radl, V.2    Hai, B.3    Kloos, K.4    Fuka, M.5    Engel, M.6
  • 32
    • 0036741933 scopus 로고    scopus 로고
    • Ammonia, methane, and nitrous oxide emission from pig slurry applied to a pasture in New Zealand
    • Sherlock RR, Sommer SG, Khan RZ, Wood CW, Guertal EA, Freney JR et al. (2002). Ammonia, methane, and nitrous oxide emission from pig slurry applied to a pasture in New Zealand. J Environ Qual 31: 1491-1501.
    • (2002) J Environ Qual , vol.31 , pp. 1491-1501
    • Sherlock, R.R.1    Sommer, S.G.2    Khan, R.Z.3    Wood, C.W.4    Guertal, E.A.5    Freney, J.R.6
  • 33
    • 30644480453 scopus 로고    scopus 로고
    • Effects of excretal returns and soil compaction on nitrous oxide emissions from a cattle overwintering area
    • Šimek M, Brucek P, Hynšt J, Uhlírová E, Petersen SO. (2006). Effects of excretal returns and soil compaction on nitrous oxide emissions from a cattle overwintering area. Agr Ecosys Environ 112: 186-191.
    • (2006) Agr Ecosys Environ , vol.112 , pp. 186-191
    • Šimek, M.1    Brucek, P.2    Hynšt, J.3    Uhlírová, E.4    Petersen, S.O.5
  • 34
    • 0030265249 scopus 로고    scopus 로고
    • Nitrous oxide and methane emissions from pig slurry amended soils
    • Sommer SG, Sherlock RR, Khan RZ. (1996). Nitrous oxide and methane emissions from pig slurry amended soils. Soil Biol Biochem 28: 1541-1544.
    • (1996) Soil Biol Biochem , vol.28 , pp. 1541-1544
    • Sommer, S.G.1    Sherlock, R.R.2    Khan, R.Z.3
  • 35
    • 4444355341 scopus 로고    scopus 로고
    • Phylogenetic analysis of methyl coenzyme-M reductase detected from the bovine rumen doi:10.1111/j.1472-765X.2004.01566.x
    • Tatsuoka N, Mohammed N, Mitsumori M, Hara K, Kurihara M, Itabashi H. (2004). Phylogenetic analysis of methyl coenzyme-M reductase detected from the bovine rumen doi:10.1111/j.1472-765X.2004.01566.x. Lett Appl Microbiol 39: 257-260.
    • (2004) Lett Appl Microbiol , vol.39 , pp. 257-260
    • Tatsuoka, N.1    Mohammed, N.2    Mitsumori, M.3    Hara, K.4    Kurihara, M.5    Itabashi, H.6
  • 36
    • 0031685510 scopus 로고    scopus 로고
    • Biochemistry of methanogenesis: A tribute to Marjory Stephenson. 1998 Marjory Stephenson Prize Lecture
    • Thauer R. (1998). Biochemistry of methanogenesis: a tribute to Marjory Stephenson. 1998 Marjory Stephenson Prize Lecture. Microbiology 144: 2377-2406.
    • (1998) Microbiology , vol.144 , pp. 2377-2406
    • Thauer, R.1
  • 37
    • 0033852495 scopus 로고    scopus 로고
    • High spatial variability of methane production on the micro-scale: Spatial association with hot spots of organic material and archaeal populations
    • Wachinger G, Fiedler S, Zepp K, Gattinger A, Sommer M, Roth K. (2000). High spatial variability of methane production on the micro-scale: spatial association with hot spots of organic material and archaeal populations. Soil Biol Biochem 32: 1121-1130.
    • (2000) Soil Biol Biochem , vol.32 , pp. 1121-1130
    • Wachinger, G.1    Fiedler, S.2    Zepp, K.3    Gattinger, A.4    Sommer, M.5    Roth, K.6
  • 38
    • 25144452954 scopus 로고    scopus 로고
    • Methane fluxes in permafrost habitats of the Lena Delta: Effects of microbial community structure and organic matter quality
    • Wagner D, Lipski A, Embacher A, Gattinger A. (2005). Methane fluxes in permafrost habitats of the Lena Delta: effects of microbial community structure and organic matter quality. Environ Microbiol 7: 1582-1592.
    • (2005) Environ Microbiol , vol.7 , pp. 1582-1592
    • Wagner, D.1    Lipski, A.2    Embacher, A.3    Gattinger, A.4
  • 39
    • 0035207942 scopus 로고    scopus 로고
    • Spatial and time distribution of dairy cattle excreta in an intensive pasture system
    • White SL, Sheffield RE, Washburn SP, King LD, Green Jr JT. (2001). Spatial and time distribution of dairy cattle excreta in an intensive pasture system. J Environ Qual 30: 2180-2187.
    • (2001) J Environ Qual , vol.30 , pp. 2180-2187
    • White, S.L.1    Sheffield, R.E.2    Washburn, S.P.3    King, L.D.4    Green Jr, J.T.5
  • 40
    • 0006306565 scopus 로고    scopus 로고
    • Czech Central Institute for Supervising and Testing in Agriculture: Brno in Czech
    • Zbíral J. (1995). Soil Analyses, Part I. Czech Central Institute for Supervising and Testing in Agriculture: Brno (in Czech).
    • (1995) Soil Analyses, Part I
    • Zbíral, J.1
  • 41
    • 0006306565 scopus 로고    scopus 로고
    • Czech Central Institute for Supervising and Testing in Agriculture: Brno in Czech
    • Zbíral J, Honsa I, Malý S. (1997). Soil Analyses, Part III. Czech Central Institute for Supervising and Testing in Agriculture: Brno (in Czech).
    • (1997) Soil Analyses, Part III
    • Zbíral, J.1    Honsa, I.2    Malý, S.3
  • 42
    • 0033181049 scopus 로고    scopus 로고
    • Identification of single cultured microorganisms based on their whole-community fatty acid profiles, using an extended extraction procedure
    • Zelles L. (1999). Identification of single cultured microorganisms based on their whole-community fatty acid profiles, using an extended extraction procedure. Chemosphere 39: 665-682.
    • (1999) Chemosphere , vol.39 , pp. 665-682
    • Zelles, L.1
  • 43
    • 43949170345 scopus 로고
    • Fractionation of fatty acids derived from soil lipids by soil phase extraction and their quantitative analysis by GC-MS
    • Zelles L, Bai QY. (1993). Fractionation of fatty acids derived from soil lipids by soil phase extraction and their quantitative analysis by GC-MS. Soil Biol Biochem 25: 130-134.
    • (1993) Soil Biol Biochem , vol.25 , pp. 130-134
    • Zelles, L.1    Bai, Q.Y.2


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