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Volumn 131, Issue 3, 2007, Pages 231-239

Photocleavable linkage between genotype and phenotype for rapid and efficient recovery of nucleic acids encoding affinity-selected proteins

Author keywords

Directed evolution; Drug receptor; Protein engineering; Proteomics; Puromycin

Indexed keywords

ANTIBODIES; DNA; ENZYME INHIBITION; GENES; IRRADIATION; RNA;

EID: 34548388477     PISSN: 01681656     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jbiotec.2007.07.947     Document Type: Article
Times cited : (16)

References (36)
  • 1
    • 1342286046 scopus 로고    scopus 로고
    • Design and synthesis of a photocleavable biotinylated nucleotide for DNA analysis by mass spectrometry
    • Bai X., Kim S., Li Z., Turro N.J., and Ju J. Design and synthesis of a photocleavable biotinylated nucleotide for DNA analysis by mass spectrometry. Nucleic Acids Res. 32 (2004) 535-541
    • (2004) Nucleic Acids Res. , vol.32 , pp. 535-541
    • Bai, X.1    Kim, S.2    Li, Z.3    Turro, N.J.4    Ju, J.5
  • 2
    • 18044391361 scopus 로고    scopus 로고
    • Covalent DNA display as a novel tool for directed evolution of proteins in vitro
    • Bertschinger J., and Neri D. Covalent DNA display as a novel tool for directed evolution of proteins in vitro. Protein Eng. Des. Sel. 17 (2004) 699-707
    • (2004) Protein Eng. Des. Sel. , vol.17 , pp. 699-707
    • Bertschinger, J.1    Neri, D.2
  • 3
    • 0032772534 scopus 로고    scopus 로고
    • STABLE: protein-DNA fusion system for screening of combinatorial protein libraries in vitro
    • Doi N., and Yanagawa H. STABLE: protein-DNA fusion system for screening of combinatorial protein libraries in vitro. FEBS Lett. 457 (1999) 227-230
    • (1999) FEBS Lett. , vol.457 , pp. 227-230
    • Doi, N.1    Yanagawa, H.2
  • 4
    • 0034861907 scopus 로고    scopus 로고
    • Genotype-phenotype linkage for directed evolution and screening of combinatorial protein libraries
    • Doi N., and Yanagawa H. Genotype-phenotype linkage for directed evolution and screening of combinatorial protein libraries. Comb. Chem. High Throughput Screen. 4 (2001) 497-509
    • (2001) Comb. Chem. High Throughput Screen. , vol.4 , pp. 497-509
    • Doi, N.1    Yanagawa, H.2
  • 5
    • 0036603593 scopus 로고    scopus 로고
    • In vitro selection as a powerful tool for the applied evolution of proteins and peptides
    • Dower W.J., and Mattheakis L.C. In vitro selection as a powerful tool for the applied evolution of proteins and peptides. Curr. Opin. Chem. Biol. 6 (2002) 390-398
    • (2002) Curr. Opin. Chem. Biol. , vol.6 , pp. 390-398
    • Dower, W.J.1    Mattheakis, L.C.2
  • 9
    • 0030974119 scopus 로고    scopus 로고
    • In vitro selection and evolution of functional proteins by using ribosome display
    • Hanes J., and Plückthun A. In vitro selection and evolution of functional proteins by using ribosome display. Proc. Natl. Acad. Sci. U.S.A. 94 (1997) 4937-4942
    • (1997) Proc. Natl. Acad. Sci. U.S.A. , vol.94 , pp. 4937-4942
    • Hanes, J.1    Plückthun, A.2
  • 10
    • 0031574037 scopus 로고    scopus 로고
    • Antibody-ribosome-mRNA (ARM) complexes as efficient selection particles for in vitro display and evolution of antibody combining sites
    • He M., and Taussig M.J. Antibody-ribosome-mRNA (ARM) complexes as efficient selection particles for in vitro display and evolution of antibody combining sites. Nucleic Acids Res. 25 (1997) 5132-5134
    • (1997) Nucleic Acids Res. , vol.25 , pp. 5132-5134
    • He, M.1    Taussig, M.J.2
  • 11
    • 17044391149 scopus 로고    scopus 로고
    • Application of quantitative real-time PCR for monitoring the process of enrichment of clones on in vitro protein selection
    • Horisawa K., Doi N., Takashima H., and Yanagawa H. Application of quantitative real-time PCR for monitoring the process of enrichment of clones on in vitro protein selection. J. Biochem. 137 (2005) 121-124
    • (2005) J. Biochem. , vol.137 , pp. 121-124
    • Horisawa, K.1    Doi, N.2    Takashima, H.3    Yanagawa, H.4
  • 14
    • 23044447796 scopus 로고    scopus 로고
    • New genotype-phenotype linkages for directed evolution of functional proteins
    • Leemhuis H., Stein V., Griffiths A.D., and Hollfelder F. New genotype-phenotype linkages for directed evolution of functional proteins. Curr. Opin. Struct. Biol. 15 (2005) 472-478
    • (2005) Curr. Opin. Struct. Biol. , vol.15 , pp. 472-478
    • Leemhuis, H.1    Stein, V.2    Griffiths, A.D.3    Hollfelder, F.4
  • 15
    • 3142685154 scopus 로고    scopus 로고
    • In-vitro protein evolution by ribosome display and mRNA display
    • Lipovsek D., and Plückthun A. In-vitro protein evolution by ribosome display and mRNA display. J. Immunol. Methods 290 (2004) 51-67
    • (2004) J. Immunol. Methods , vol.290 , pp. 51-67
    • Lipovsek, D.1    Plückthun, A.2
  • 16
    • 34548394982 scopus 로고    scopus 로고
    • Löhning, C., 2001. Methods for displaying (poly)peptides/proteins on bacteriophage particles via disulfide bonds. Patent WO/01/05950.
  • 17
    • 0028592703 scopus 로고
    • An in vitro polysome display system for identifying ligands from very large peptide libraries
    • Mattheakis L.C., Bhatt R.R., and Dower W.J. An in vitro polysome display system for identifying ligands from very large peptide libraries. Proc. Natl. Acad. Sci. U.S.A. 91 (1994) 9022-9026
    • (1994) Proc. Natl. Acad. Sci. U.S.A. , vol.91 , pp. 9022-9026
    • Mattheakis, L.C.1    Bhatt, R.R.2    Dower, W.J.3
  • 18
    • 0035986682 scopus 로고    scopus 로고
    • Drug receptor identification from multiple tissues using cellular-derived mRNA display libraries
    • McPherson M., Yang Y., Hammond P.W., and Kreider B.L. Drug receptor identification from multiple tissues using cellular-derived mRNA display libraries. Chem. Biol. 9 (2002) 691-698
    • (2002) Chem. Biol. , vol.9 , pp. 691-698
    • McPherson, M.1    Yang, Y.2    Hammond, P.W.3    Kreider, B.L.4
  • 21
    • 0031559943 scopus 로고    scopus 로고
    • In vitro virus: bonding of mRNA bearing puromycin at the 3'-terminal end to the C-terminal end of its encoded protein on the ribosome in vitro
    • Nemoto N., Miyamoto-Sato E., Husimi Y., and Yanagawa H. In vitro virus: bonding of mRNA bearing puromycin at the 3'-terminal end to the C-terminal end of its encoded protein on the ribosome in vitro. FEBS Lett. 414 (1997) 405-408
    • (1997) FEBS Lett. , vol.414 , pp. 405-408
    • Nemoto, N.1    Miyamoto-Sato, E.2    Husimi, Y.3    Yanagawa, H.4
  • 22
    • 0029928172 scopus 로고    scopus 로고
    • Photocleavable biotin phosphoramidite for 5'-end-labeling, affinity purification and phosphorylation of synthetic oligonucleotides
    • Olejnik J., Krzymanska-Olejnik E., and Rothschild K.J. Photocleavable biotin phosphoramidite for 5'-end-labeling, affinity purification and phosphorylation of synthetic oligonucleotides. Nucleic Acids Res. 24 (1996) 361-366
    • (1996) Nucleic Acids Res. , vol.24 , pp. 361-366
    • Olejnik, J.1    Krzymanska-Olejnik, E.2    Rothschild, K.J.3
  • 26
    • 0030817279 scopus 로고    scopus 로고
    • RNA-peptide fusions for the in vitro selection of peptides and proteins
    • Roberts R.W., and Szostak J.W. RNA-peptide fusions for the in vitro selection of peptides and proteins. Proc. Natl. Acad. Sci. U.S.A. 94 (1997) 12297-12302
    • (1997) Proc. Natl. Acad. Sci. U.S.A. , vol.94 , pp. 12297-12302
    • Roberts, R.W.1    Szostak, J.W.2
  • 27
    • 0347003697 scopus 로고    scopus 로고
    • Affinity-independent elution of antibody-displaying phages using cleavable DNA linker containing streptavidin beads
    • Santala V., and Saviranta P. Affinity-independent elution of antibody-displaying phages using cleavable DNA linker containing streptavidin beads. J. Immunol. Methods 284 (2004) 159-163
    • (2004) J. Immunol. Methods , vol.284 , pp. 159-163
    • Santala, V.1    Saviranta, P.2
  • 30
    • 0021818675 scopus 로고
    • Filamentous fusion phage: novel expression vectors that display cloned antigens on the virion surface
    • Smith G.P. Filamentous fusion phage: novel expression vectors that display cloned antigens on the virion surface. Science 228 (1985) 1315-1317
    • (1985) Science , vol.228 , pp. 1315-1317
    • Smith, G.P.1
  • 32
    • 0031854986 scopus 로고    scopus 로고
    • Man-made cell-like compartments for molecular evolution
    • Tawfik D.S., and Griffiths A.D. Man-made cell-like compartments for molecular evolution. Nat. Biotechnol. 16 (1998) 652-656
    • (1998) Nat. Biotechnol. , vol.16 , pp. 652-656
    • Tawfik, D.S.1    Griffiths, A.D.2
  • 33
    • 0030047289 scopus 로고    scopus 로고
    • Retrieval of human antibodies from phage-display libraries using enzymatic cleavage
    • Ward R.L., Clark M.A., Lees J., and Hawkins N.J. Retrieval of human antibodies from phage-display libraries using enzymatic cleavage. J. Immunol. Methods 189 (1996) 73-82
    • (1996) J. Immunol. Methods , vol.189 , pp. 73-82
    • Ward, R.L.1    Clark, M.A.2    Lees, J.3    Hawkins, N.J.4
  • 34
    • 1942424188 scopus 로고    scopus 로고
    • DNA Display of biologically active proteins for in vitro protein selection
    • Yonezawa M., Doi N., Higashinakagawa T., and Yanagawa H. DNA Display of biologically active proteins for in vitro protein selection. J. Biochem. 135 (2004) 285-288
    • (2004) J. Biochem. , vol.135 , pp. 285-288
    • Yonezawa, M.1    Doi, N.2    Higashinakagawa, T.3    Yanagawa, H.4
  • 36
    • 2442442119 scopus 로고    scopus 로고
    • Directed in vitro evolution and crystallographic analysis of a peptide-binding single chain antibody fragment (scFv) with low picomolar affinity
    • Zahnd C., Spinelli S., Luginbühl B., Amstutz P., Cambillau C., and Plückthun A. Directed in vitro evolution and crystallographic analysis of a peptide-binding single chain antibody fragment (scFv) with low picomolar affinity. J. Biol. Chem. 279 (2004) 18870-18877
    • (2004) J. Biol. Chem. , vol.279 , pp. 18870-18877
    • Zahnd, C.1    Spinelli, S.2    Luginbühl, B.3    Amstutz, P.4    Cambillau, C.5    Plückthun, A.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.