Structure of a lectin from Canavalia gladiata seeds: New structural insights for old molecules

BMC Structural Biology

Volumn 7, Issue , 2007, Pages

  Delatorre, Plínio ^a,b   Rocha, Bruno A M ^a,b   Souza, Emmanuel P ^a   Oliveira, Taianá M ^a   Bezerra, Gustavo A ^a   Moreno, Frederico B M B ^c   Freitas, Beatriz T ^b   Santi Gadelha, Tatiane ^c   Sampaio, Alexandre H ^a   Azevedo Jr , Walter F ^d,e   Cavada, Benildo S ^a  

^a FEDERAL UNIVERSITY OF CEARÁ   (Brazil)

^b REGIONAL UNIVERSITY OF CARIRI   (Brazil)

^c FEDERAL UNIVERSITY OF PARAÍBA   (Brazil)

^d SÃO PAULO STATE UNIVERSITY UNESP   (Brazil)

^e PONTIFICAL CATHOLIC UNIVERSITY OF RIO GRANDE DO SUL   (Brazil)

Author keywords

[No Author keywords available]

Indexed keywords

2 AMINOBUTYRIC ACID; CARBOHYDRATE BINDING PROTEIN; CONCANAVALIN A; LECTIN; AMINOBUTYRIC ACID DERIVATIVE; PLANT LECTIN;

ARTICLE; BINDING SITE; CANAVALIA; CHEMICAL STRUCTURE; CRYSTAL STRUCTURE; MASS SPECTROMETRY; NONHUMAN; PLANT SEED; X RAY CRYSTALLOGRAPHY; CHEMISTRY; ELECTROSPRAY MASS SPECTROMETRY; HYDROPHOBICITY; METABOLISM; PROTEIN BINDING; PROTEIN CONFORMATION; PROTEIN TERTIARY STRUCTURE;

CANAVALIA GLADIATA;

AMINOBUTYRIC ACIDS; BINDING SITES; CANAVALIA; CRYSTALLOGRAPHY, X-RAY; HYDROPHOBICITY; MODELS, MOLECULAR; PLANT LECTINS; PROTEIN BINDING; PROTEIN CONFORMATION; PROTEIN STRUCTURE, TERTIARY; SEEDS; SPECTROMETRY, MASS, ELECTROSPRAY IONIZATION;

EID: 34548226847     PISSN: None     EISSN: 14726807     Source Type: Journal    
DOI: 10.1186/1472-6807-7-52     Document Type: Article

References (31)

1. Plant Lectins: A Composite of Several Distinct Families of Structurally and Evolutionary Related Proteins with Diverse. EJM Van Damme WJ Peumans A Barre P Rougé Crit Rev Plant Sci 1998 17 575 692 10.1016/S0735-2689(98)00365-7
2. Binding and Functional Properties of Concanavalin-A and Its Derivatives. 3. Interactions with Indoleacetic-Acid and Other Hydrophobic Ligands. GM Edelman JL Wang, J Biol Chem 1978 253 3016 3022 641053
3. Novel structures of plant lectins and their complexes with carbohydrates. J Bouckaert T Hamelryck L Wyns R Loris, Curr Opin Struct Biol 1999 9 572 577 10.1016/S0959-440X(99)00007-X 10508764
4. Carbohydrate binding, quaternary structure and a novel hydrophobic binding site in two legume lectin oligomers from Dolichos biflorus. TW Hamelryck R Loris J Bouckaert MH Dao-Thi G Strecker A Imberty E Fernandez L Wyns ME Etzler, J Mol Biol 1999 286 1161 1177 10.1006/jmbi.1998.2534 10047489
5. T Swain, Plant non-protein amino and imino acids G.A. New York, Rosenthal. Academic Press 1982
6. The use of amino acid analogues in studies on plant metabolism. PJ Lea RD Norris, Phytochemistry 1976 15 585 595 10.1016/S0031-9422(00)94399-1
7. L Taiz E Zeiger, Plant Physiology Sinauer Associates, Inc. 3 2002 11891249
8. The biochemical basis for the deleterious effects of L-canavanine. GA Rosenthal, Phytochemistry 1991 30 1055 1058 10.1016/S0031-9422(00)95170-7
9. γ-amino-butyric acid-induced resistance against necrotrophic pathogens is based on ABA-dependent priming for callose. J Ton B Mauch-Mani, Plant J 2004 38 119 130 10.1111/j.1365-313X.2004.02028.x 15053765
10. JB Taylor PD Kennewell, Modern Medicinal Chemistry NY, London, Toronto, Ellis Horward publication 1993
11. Facing herbivory as you grow up: the ontogeny of resistance in plants. K Boege RJ Marquis, Trends Ecol, Evol 2005 20 526 526 10.1016/j.tree.2005.05.001
12. Amino acids in seeds and seedlings of the genus Lens. P Rozan Y Kuo F Lambein, Phytochemistry 2001 58 281 289 10.1016/S0031-9422(01)00200-X 11551552
13. Lectins as plant defense proteins. WJ Peumans EJ Van Damme, Plant Physiol 1995 109 347 52 7480335 10.1104/pp.109.2.347
14. Molecular characterization and crystallization of Diocleinae lectins. JJ Calvete HH Thole M Raida C Urbanke A Romero TB Grangeiro MV Ramos IMA da Rocha FN Guimarães BS Cavada, Biochim et Biophys Acta 1999 1430 2 367 375
15. Native crystal structure of a nitric oxide-releasing lectin from the seeds of Canavalia maritima. CAD Gadelha FBMB Moreno T Santi-Gadelha JB Cajazeiras BAM da Rocha AMS Assreuy MRL Mota NV Pinto AVP Meireles JC Borges BT Freitas F Canduri EP Souza P Delatorre DN Criddle WF de Azevedo BS Cavada, J Struct Biol 2005 152 185 194 10.1016/j.jsb.2005.07.012 16337811
16. Refined Structure of Concanavalin-a Complexed with Methyl Alpha-D-Mannopyranoside at 2.0 Angstrom Resolution and Comparison with the Saccharide-Free Structure. JH Naismith C Emmerich J Habash SJ Harrop JR Helliwell WN Hunter J Raftery AJ Kalb J Yariv, Acta Cryst D 1994 50 847 858 10.1107/S0907444994005287
17. The structure of concanavalin A and its bound solvent determined with small-molecule accuracy at 0.94 angstrom resolution. A Deacon T Gleichmann AJ Kalb H Price J Raftery G Bradbrook J Yariv JR Helliwell, J Chem Soc-Faraday Transactions 1997 93 4305 4312 10.1039/a704140c
18. The crystal structures of Man(alpha 1-3)Man(alpha 1-0)Me and Man(alpha 1-6)Man(alpha 1-0)Me in complex with concanavalin A. J Bouckaert TW Hamelryck L Wyns R Loris, J Biol Chem 1999 274 29188 29195 10.1074/jbc.274.41.29188 10506175
19. The crystal structure of the complex of concanavalin A with 4'-methylumbelliferyl-alpha-D-glucopyranoside. SJ Hamodrakas PN Kanellopoulos K Pavlou PA Tucker, J Struct Biol 1997 118 23 30 10.1006/jsbi.1996.3837 9087912
20. Principles of structures of animal and plant lectins. R Loris, Biochim Biophys Acta 2002 1572 198 208 12223270
21. Sequence relationships in the legume lectin fold and other jelly rolls. A Williams DR Westhead, Prot Eng 2002 15 10 771 774 10.1093/protein/15.10.771
22. Lectins From Pisum arvense Seeds Behave Differently From Storage Proteins During Germination In The Darkness. LIMM Da Silva MV Ramos JB Cajazeiras PR Ferreira CAV Carvalho TB Grangeiro EP Nunes AH Sampaio BT Freitas JAG Da Silveira BS Cavada, Rev Bras Fisiol Veg 2000 12 255 262
23. Purification and partial characterization of a lectin from Canavalia grandiflora benth. seeds. VM Ceccatto BS Cavada EP Nunes NA Nogueira MB Grangeiro FB Moreno EH Teixeira AH Sampaio MA Alves MV Ramos JJ Calvete TB Grangeiro, Protein Pept Lett 2002 9 67 73 10.2174/0929866023409002 12141926
24. Crystallization and preliminary X-ray diffraction analysis of the lectin from Canavalia gladiata seeds. FBMB Moreno P Delatorre BT Freitas BAM Rocha EP Souza F Faco F Canduri ALH Cardoso VN Freire JL Lima AH Sampaio JJ Calvete WF De Azevedo BS Cavada, Acta Cryst D 2004 60 1493 1495 10.1107/S0907444904014489
25. AGW Leslie, Newsletter on Protein Crystallography 1992
26. PR Evans, Joint CCP4 and ESF-EACBM Newsletter 1997 33 22 24
27. MOLREP: an Automated Program for Molecular Replacement. A Vargin A Teplyakov, J Appl Cryst 1997 30 1022 1025 10.1107/S0021889897006766
28. PRODRG-a tool for high-throughput crystallography of protein-ligand complexes. AW Schuettelkopf DMF van Aalten, Acta Crystallographica D 2004 60 Pt 8 1355 1363
29. Collaborative Computational Project, Number 4. The CCP4 Suite: Programs for Protein Crystallography. Acta Cryst D 1994 50 760 763 10.1107/ S0907444994003112
30. XtalView/Xfit - A versatile program for manipulating atomic coordinates and electron density. DE McRee, J Struct Biol 1999 125 156 165 10.1006/jsbi.1999.4094 10222271
31. The Protein Data Bank. HM Berman J Westbrook Z Feng G Gilliland TN Bhat H Weissig IN Shindyalov PE Bourne, Nucleic Acids Res 2000 28 235 242 10592235 10.1093/nar/28.1.235