Candidate gene approach to identify genes underlying quantitative traits and develop diagnostic markers in potato

Crop Science

Volumn 47, Issue SUPPL. DEC., 2007, Pages

  Gebhardt, Christiane ^a   Li, Li ^a   Pajerowska Mukthar, Karolina ^a   Achenbach, Ute ^a   Sattarzadeh, Amirali ^a   Bormann, Christina ^a   Ilarionova, Evgeniya ^a   Ballvora, Agim ^a  

^a MAX PLANCK INSTITUTE FOR PLANT BREEDING RESEARCH   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

ARABIDOPSIS; ARABIDOPSIS THALIANA; GLOBODERA PALLIDA; HOMO SAPIENS; PHYTOPHTHORA INFESTANS; SOLANUM TUBEROSUM; TUBER (TRUFFLE);

EID: 34548188372     PISSN: 0011183X     EISSN: None     Source Type: Journal    
DOI: 10.2135/cropsci2007.04.0005IPBS     Document Type: Conference Paper

References (22)

1. Ballvora, A., M.R. Ercolano, J. Weiß, K. Meksem, C. Bormann, P. Oberhagemann, F. Salamini, and C. Gebhardt. 2002. The R1 gene for potato resistance to late blight (Phytophthora infestans) belongs to the leucine zipper/NBS/LRR class of plant resistance genes. Plant J. 30:361-371.
2. Börnke, F.M., M. Hajirezaei, and U. Sonnewald. 2002. Potato tubers as bioreactors for palatinose production. J. Biotechnol. 96:119-124.
3. Chen, X., F. Salamini, and C. Gebhardt. 2001. A potato molecular function map for carbohydrate metabolism and transport. Theor. Appl. Genet. 102:284-295.
4. Fridman, E., T. Pleban, and D. Zamir. 2000. A recombination hotspot delimits a wild-species quantitative trait locus for tomato sugar content to 484 bp within an invertase gene. Proc. Natl. Acad. Sci. USA 97:4718-4723.
5. Gebhardt, C. 2004. Potato genetics: Molecular maps and more in biotechnology in agriculture and forestry. Vol. 55. p. 215-227. In H. Lörz and G. Wenzel (ed.) Molecular marker systems. Springer-Verlag, Berlin, Heidelberg.
6. Gebhardt, C., A. Ballvora, B. Walkemeier, P. Oberhagemann, and K. Schüler. 2004. Assessing genetic potential in germ plasm collections of crop plants by marker-trait association: A case study for potatoes with quantitative variation of resistance to late blight and maturity type. Mol. Breed. 13:93-102.
7. Gebhardt, C., and J.P.T. Valkonen. 2001. Organization of genes controlling disease resistance in the potato genome. Annu. Rev. Phytopathol. 39:79-102.
8. Graf, G. 2002. Die Weltkartoffelernte 2001. (In German.) Kartoffelbau 11:440-442.
9. Hermsen, J.G.T.H., and J. Verdenius. 1973. Selection from Solanum tuberosum group phureja of genotypes combining high-frequency haploid induction with homozygosity for embryo spot. Euphytica 22:244-259.
10. Hirschhorn, J.N., and K.J. Daly. 2005. Genome-wide association studies for common diseases and complex traits. Nat. Rev. Genet. 6:95-108.
11. Li, L., J. Strahwald, H.-R. Hofferbert, J. Lübeck, E. Tacke, H. Junghans, J. Wunder, and C. Gebhardt. 2005. DNA variation at the invertase locus invGE/GF is associated with tuber quality traits in populations of potato breeding clones. Genetics 170:813-821.
12. Maddison, A.L., P.E. Hedley, R.C. Meyer, N. Aziz, D. Davidson, and G.C. Machray. 1999. Expression of tandem invertase genes associated with sexual and vegetative growth cycles in potato. Plant Mol. Biol. 41:741-751.
13. Menendez, C.M., E. Ritter, R. Schäfer-Pregl, B. Walkemeier, A. Kalde, F. Salamini, and C. Gebhardt. 2002. Cold-sweetening in diploid potato. Mapping QTL and candidate genes. Genetics 162:1423-1434.
14. Pajerowska, K.M., J.E. Parker, and C. Gebhardt. 2005. Potato homologues of Arabidopsis thaliana genes functional in defense signaling - Identification, genetic mapping and molecular cloning. Mol. Plant. Microbe Interact. 18:1107-1119.
15. Pflieger, S., V. Lefebvre, and M. Causse. 2001. The candidate gene approach in plant genetics: A review. Mol. Breed. 7:275-291.
16. Powell, W., and H. Uhrig. 1987. Anther culture of Solanum genotypes. Plant Cell Tissue Organ Cult. 11:13-24.
17. Risch, N.J. 2000. Searching for genetic determinants in the new millennium. Nature 405:847-856.
18. Ross, H. 1986. Potato breeding - Problems and perspectives. J. Plant Breeding Suppl. 13. Parey, Berlin and Hamburg.
19. Sattarzadeh, A., U. Achenbach, J. Lübeck, J. Strahwald, E. Tacke, H.-R. Hofferbert, T. Rothsteyn, and C. Gebhardt. 2006. Single nucleotide polymorphism (SNP) genotyping as basis for developing a PCR-based marker highly diagnostic for potato varieties with high resistance to Globodera pallida pathotype Pa2/3. Mol. Breed. 18:301-312.
20. Schäfer-Pregl, R., E. Ritter, L. Concilio, J. Hesselbach, L. Lovatti, B. Walkemeier, H. Thelen, F. Salamini, and C. Gebhardt. 1998. Analysis of quantitative trait loci (QTL) and quantitative trait alleles (QTA) for potato tuber yield and starch content. Theor. Appl. Genet. 97:834-846.
21. Schafer, A.J., and J.R. Hawkins. 1998. DNA variation and the future of human genetics. Nat. Biotechnol. 16:33-39.
22. Simko, I., S. Costanzo, K.G. Haynes, B.J. Christ, and R.W. Jones. 2004. Linkage disequilibrium mapping of a Verticillium dahliae resistance quantitative trait locus in tetraploid potato (Solanum tuberosum) through a candidate gene approach. Theor. Appl. Genet. 108:217-224.