New method for characterizing highly disulfide-bridged peptides in complex mixtures: Application to toxin identification from crude venoms

Journal of Proteome Research

Volumn 6, Issue 8, 2007, Pages 3216-3223

  Quinton, Loïc ^a   Demeure, Kevin ^a   Dobson, Rowan ^a   Gilles, Nicolas ^b   Gabelica, Valérie ^a   De Pauw, Edwin ^a  

^a UNIVERSITY OF LIÈGE   (Belgium)

^b SERVICE DE CHIMIE BIOORGANIQUE ET DE MARQUAGE   (France)

Author keywords

Conotoxin; Disulfide bridged peptides; In source decay; Post source decay; Snake toxins; Top down sequencing

Indexed keywords

1,5 DIAMINONAPHTHALENE; ALPHA CYANO 4 HYDROXYCINNAMIC ACID; CARDIOTOXIN; DISULFIDE; NAPHTHALENE; NEUROTOXIN; PHOSPHINE DERIVATIVE; TRIS(CARBOXYETHYL)PHOSPHINE; UNCLASSIFIED DRUG; VENOM;

AMINO ACID SEQUENCE; ARTICLE; CONTROLLED STUDY; DISULFIDE BOND; LIQUID CHROMATOGRAPHY; MATRIX ASSISTED LASER DESORPTION IONIZATION TIME OF FLIGHT MASS SPECTROMETRY; METHODOLOGY; MOLECULAR WEIGHT; NONHUMAN; PRIORITY JOURNAL; TOXIN ANALYSIS;

2-NAPHTHYLAMINE; ANIMALS; CHROMATOGRAPHY, LIQUID; COBRA NEUROTOXIN PROTEINS; COBRA VENOMS; COUMARIC ACIDS; DISULFIDES; PEPTIDES; REPTILIAN PROTEINS; SNAKE VENOMS; SPECTROMETRY, MASS, MATRIX-ASSISTED LASER DESORPTION-IONIZATION;

ANIMALIA;

EID: 34548167855     PISSN: 15353893     EISSN: None     Source Type: Journal    
DOI: 10.1021/pr070142t     Document Type: Article

References (36)

1. Serrano, S. M. T.; Shannon, J. D.; Wang, D.; Camargo, A. C. N.; Fox J. W. Proteomics 2005, 5, 501-510.
2. Kalume, D. E.; Stenflo, J.; Czerwiec, E.; Hambe, B.; Furie, B. C.; Furie, B.; Roepstorff, P. J. Mass Spectrom. 2000, 35, 145-156.
3. Wedemeyer, W. J.; Welker, E.; Narayan, M.; Sheraga, H. A. Biochemistry 2000, 39, 4207-4216.
4. Lewis, R. J.; Garcia, M. L. Nat. Rev. Drug Discovery 2003, 2, 790-802.
5. Olivera, B. M. Mol. Biol. Cell 1997, 8, 2101-2109.
6. Fenn, J. B.; Mann, M.; Meng, C. K.; Wong, S. F.; Whitehouse, C. M. Science 1989, 246, 64-71.
7. Karas, M.; Bachmann, D.; Bahr, U.; Hillenkamp, F. J. Mass Spectrom., Ion Processes 1987, 78, 53-68.
8. Karas, M.; Hillenkamp, F. Anal. Chem. 1988, 60, 2299-2301.
9. Biemann, K.; Martin, S. A. Mass Spectrom. Rev. 1987, 6, 1-75.
10. Shevchenko, A.; Tomas, H.; Havlis, J.; Olsen, J. V.; Mann, M. Nat. Protocols 2006, 1, 2856-2860.
11. Fukuyama, Y.; Iwamoto, S.; Tanaka, K. J. Mass Spectrom. 2006, 41, 191-201.
12. Demeure, K.; Quinton, L.; Gabelica, V.; De Pauw, E. Anal. Chem., submitted.
13. Brown, R. S.; Lennon, J. J. Anal. Chem. 1995, 67, 3990-3999.
14. Brown, R. S.; Feng, J.; Reiber, D. C. Int. J. Mass Spectrom., Ion Processes 1997, 169, 1-18.
15. Le Gall, F.; Favreau, P.; Richard, G.; Letourneux, Y.; Molgo, J. Toxicon 1999, 37, 985-998.
16. Olivera, B. M.; Rivier, J.; Clark, C.; Ramilo, C. A.; Corpuz, G. P.; Abogadie, F. C.; Mena, E. E.; Woodward, S. R.; Hillyard, D. R.; Cruz, L. J. Science 1990, 249, 257-263.
17. Garrett, J. E.; Buczek, O.; Watkins, M.; Olivera, B. M.; Bulaj, G. Biochem. Biophys. Res Commun. 2005, 328, 362-367.
18. Czerwiec, E.; Kalume, D. E.; Roepstorff, P.; Hambe, B.; Furie, B.; Furie, B. C.; Stenflo, J. FEBS J. 2006, 273, 2779-2788. Erratum in FEBS J. 2006, 273, 3118.
19. Steen, H.; Mann, M. Anal. Chem. 2002, 74, 6230-6236.
20. Favreau, P.; Menin, L.; Michalet, S.; Perret, F.; Cheneval, O.; Stocklin, M.; Bulet, P.; Stocklin, R. Toxicon 2006, 47, 676-687.
21. Escoubas, P.; Sollod, B.; King, G. F. Toxicon 2006, 47, 650-663.
22. Kaufmann, R.; Spengler, B.; Lutzenkirchen, F. Rapid Commun. Mass Spectrom. 1993, 7, 902-910.
23. Hayashi, K.; Takeshi, M.; Sasaki, T. Biochem. Biophys. Res. Commun. 1971, 45, 1357-1362.
24. Suckau, D.; Resemann, A.; Schuerenberg, M.; Hufnagel, P.; Franzen, M.; Holle, A. Anal. Bioanal. Chem. 2003, 376, 952-965.
25. Burn, J. A.; Butler, J. C.; Moran, J.; Whitesides, G. M. J. Org. Chem. 1991, 56, 2648-2650.
26. Burmeister Getz, E. L.; Xiao, M.; Chakrabarty, T.; Cooke, R.; Selvin, P. R. Anal. Chem. 1999, 273, 73-80.
27. Terlau, H.; Olivera, B. M. Physiol. Rev. 2004, 84, 41-68.
28. Roepstorff, P.; Fohlman, J. Biomed. Mass Spectrom. 1984, 11, 601.
29. Biemann, K. Biomed. Environ. Mass Spectrom. 1988, 16, 99-111.
30. Conticello, S. G.; Gilad, Y.; Avidan, N.; Ben Asher, E.; Levy, Z.; Fainzilber, M. Mol. Biol. Evol. 2001, 18, 120-131.
31. Quinton, L.; Le Caër, J. P.; Ducancel, F.; Chamot-Rooke, J. Anal. Chem. 2005, 77, 6630-6639.
32. Suckau, D.; Resemann, A. Anal. Chem. 2003, 75, 5817-5824.
33. Reiber, D. C.; Grover, T. A.; Brown, R. S. Anal. Chem. 1998, 70, 673-683.
34. Hayashi, K.; Nakai, K.; Sasaki, T.; Suzuki, T. Biochem. Biophys. Res. Commun. 1969, 36, 482-486.
35. Zubarev, R. A.; Kelleher, N. L.; McLafferty, F. W. J. Am. Chem. Soc. 1998, 120, 3265-3266.
36. Ducancel, F. Cell. Mol. Life Sci. 2005, 62, 2828-2839.