Recruitment and survival of Northeast Pacific Ocean fish stocks: Temporal trends, covariation, and regime shifts

Canadian Journal of Fisheries and Aquatic Sciences

Volumn 64, Issue 6, 2007, Pages 911-927

  Mueter, Franz J ^a,d   Boldt, Jennifer L ^a   Megrey, Bernard A ^b   Peterman, Randall M ^c  

^a UNIVERSITY OF WASHINGTON   (United States)

^b ALASKA FISHERIES SCIENCE CENTER   (United States)

^c SIMON FRASER UNIVERSITY   (Canada)

^d NONE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CLIMATE CHANGE; DEMERSAL FISH; FLATFISH; GADOID; MARINE ECOSYSTEM; RECRUITMENT; SALMONID; STOCKING DENSITY; SURVIVAL;

BERING SEA; GULF OF ALASKA; PACIFIC OCEAN; PACIFIC OCEAN (NORTHEAST);

CLUPEA PALLASI; CLUPEIDAE; GADIDAE; ONCORHYNCHUS; PLEURONECTIDAE; PLEURONECTIFORMES;

EID: 34548152481     PISSN: 0706652X     EISSN: None     Source Type: Journal    
DOI: 10.1139/F07-069     Document Type: Article

References (44)

1. Adkison, M.D., Peterman, R.M., Lapointe, M.F., Gillis, D.M., and Korman, J. 1996. Alternative models of climatic effects of sockeye salmon, Oncorhynchus nerka, productivity in Bristol Bay, Alaska, and the Fraser River, British Columbia. Fish. Oceanogr. 5: 137-152.
2. Anderson, P.J., and Piatt, J.F. 1999. Community reorganization in the Gulf of Alaska following ocean climate regime shift. Mar. Ecol. Prog. Ser. 189: 117-123.
3. Beamish, R.J., and Bouillon, D.R. 1993. Pacific salmon production trends in relation to climate. Can. J. Fish. Aquat. Sci. 50: 1002-1016.
4. Bjoørnstad, O.N., and Falck, W. 2000. Nonparametric spatial covariance functions: estimation and testing. Environ. Ecol. Stat. 8: 53-70.
5. Botsford, L.W., and Lawrence, CA. 2002. Patterns of covariability among California Current chinook salmon, coho salmon, Dungeness crab, and physical oceanographic conditions. Prog. Oceanogr. 53: 283-305.
6. Botsford, L.W., and Paulsen, CM. 2000. Assessing covariability among populations in the presence of intraseries correlation: Columbia River spring-summer chinook salmon (Oncorhynchus tshawytscha). Can. J. Fish. Aquat. Sci. 57: 616-627.
7. Conners, M.E., Hollowed, A.B., and Brown, E. 2002. Retrospective analysis of Bering Sea bottom trawl surveys: regime shift and ecosystem reorganization. Prog. Oceanogr. 55: 209-222.
8. De Oliveira, J.A.A., and Butterworth, D.S. 2005. Limits to the use of environmental indices to reduce risk and (or) increase yield in the South African anchovy fishery. Afr. J. Mar. Sci. 27: 191-203.
9. Field, J.C., and Ralston, S. 2005. Spatial variability in rockfish (Sebastes spp.) recruitment events in the California Current System. Can. J. Fish. Aquat. Sci. 62: 2199-2210.
10. Francis, R.C., Hare, S.R., Hollowed, A.B., and Wooster, W.S. 1998. Effect of interdecadal climate variability on the oceanic ecosystems of the NE Pacific. Fish. Oceanogr. 7: 1-21.
11. Haeseker, S.L., Peterman, R.M., Su, Z., and Wood, C.C. 2005. Retrospective evaluation of pre-season forecasting models for pink salmon (Oncorhynchus gorbuscha). N. Am. J. Fish. Manag. 25: 897-918.
12. Hare, S.R., and Francis, R.C. 1995. Climate change and salmon production in the Northeast Pacific Ocean. In Climate change and northern fish populations. Edited by R.J. Beamish. National Research Council of Canada, Ottawa. Can. Spec. Publ. Fish. Aquat. Sci. No. 121. pp. 357-372.
13. Hare, S.R., and Mantua, N.J. 2000. Empirical evidence for North Pacific regime shifts in 1977 and 1989. Prog. Oceanogr. 47: 103-145.
14. Hare, S.R., Mantua, N., and Francis, R. 1999. Inverse production regimes: Alaska and west coast Pacific salmon. Fisheries, 24: 6-14.
15. Hastie, T.J., and Tibshirani, R.J. 1990. Generalized additive models. Monogr. Stat. Appl. Prob. No. 43. Chapman and Hall, London, UK.
16. Hollowed, A.B., and Wooster, W.S. 1995. Decadal-scale variations in the eastern subarctic Pacific. II. Response of Northeast Pacific fish stocks. In Climate change and northern fish populations. Edited by R.J. Beamish. National Research Council of Canada, Ottawa. Can. Spec. Publ. Fish. Aquat. Sci. No. 121. pp. 373-385.
17. Hollowed, A.B., Hare, S.R., and Wooster, W.S. 2001. Pacific basin climate variability and patterns of Northeast Pacific marine fish production. Prog. Oceanogr. 49: 257-282.
18. Hunt, G.L., Jr., and Stabeno, P.J. 2002. Climate change and the control of energy flow in the southeastern Bering Sea. Prog. Oceanogr. 55: 5-22.
19. Hurvich, CM., and Tsai, C.-L. 1989. Regression and time series model selection in small samples. Biometrika, 76: 297-307.
20. Kaufman, L., and Rousseeuw, P.J. 1990. Finding groups in data: an introduction to cluster analysis. Wiley, New York.
21. MacCall, A.D. 2002. Fishery Management and stock-rebuilding prospects under conditions of low-frequency environmental variability and species interactions. Bull. Mar. Sci. 70: 613-628.
22. Mantua, N.J., and Hare, S.R. 2002. The Pacific Decadal Oscillation. J. Oceanogr. 58: 35-14.
23. Megrey, B.A., Rose, K.A., Ito, S.-i., Hay, D.E., Werner, F.E., Yamanaka, Y., and Aitag, M.N. 2006. North Pacific basin-scale differences in lower and higher trophic level marine ecosystem responses to climate impacts using a nutrient-phytoplankton-zooplankton model coupled to a fish bioenergetics model. Ecol. Model. doi:10.1016/j.ecolmodel.2006.08.018
24. Mueter, F.J., Peterman, R.M., and Pyper, B.J. 2002a. Opposite effects of ocean temperature on survival rates of 120 stocks of Pacific salmon (Oncorhynchus spp.) in northern and southern areas. Can. J. Fish. Aquat. Sci. 59: 456-463.
25. Mueter, F.J., Ware, D.M., and Peterman, R.M. 2002b. Spatial correlation patterns in coastal environmental variables and survival rates of Pacific salmon in the Northeast Pacific Ocean. Fish. Oceanogr. 11: 205-218.
26. Mueter, F.J., Ladd, C., Palmer, M.C., and Norcross, B.L. 2006. Bottom-up and top-down controls of walleye pollock (Theragra chalcogramma) on the eastern Bering Sea shelf. Prog. Oceanogr. 68: 152-183.
27. North Pacific Fishery Management Council. 2005. Stock assessment and fishery evaluation report for the groundfish resources of the Bering Sea/Aleutian Islands regions. North Pacific Fishery Management Council, 605 W. 4th Ave., Suite 306, Anchorage, AK 99501, USA.
28. Peterman, R.M. 1987. Review of the components of recruitment of Pacific salmon. Am. Fish. Soc. Symp. 1: 417-429.
29. Peterman, R.M., Pyper, B.J., Lapointe, M.F., Adkison, M.D., and Walters, C.J. 1998. Patterns of covariation in survival rates of British Columbian and Alaskan sockeye salmon (Oncorhynchus nerka) stocks. Can. J. Fish. Aquat. Sci. 55: 2503-2517.
30. Peterman, R.M., Pyper, B.J., and MacGregor, B.W. 2003. Use of the Kalman filter to reconstruct historical trends in productivity of Bristol Bay sockeye salmon (Oncorhynchus nerka). Can. J. Fish. Aquat. Sci. 60: 809-824.
31. Pinheiro, J.C., and Bates, D.M. 2000. Mixed-effects models in S and S-Plus. Statistics and computing. Springer Verlag, New York.
32. Punt, A.E., and Hilborn, R. 1997. Fisheries stock assessment and decision analysis: the Bayesian approach. Rev. Fish Biol. Fish. 7: 35-63.
33. Pyper, B.J., and Peterman, R.M. 1998. Comparison of methods to account for autocorrelation in correlation analyses of fish data. Can. J. Fish. Aquat. Sci. 55: 2127-2140.
34. Pyper, B.J., Mueter, F.J., Peterman, R.M., Blackbourn, D.J., and Wood, C. 2001. Spatial covariation in survival rates of Northeast Pacific pink salmon (Oncorhynchus gorbuscha). Can. J. Fish. Aquat. Sci. 58: 1501-1515.
35. Pyper, B.J., Mueter, F.J., Peterman, R.M., Blackbourn, D.J., and Wood, C. 2002. Spatial covariation in survival rates of Northeast Pacific chum salmon. Trans. Am. Fish. Soc. 131: 343-363.
36. Pyper, B.J., Mueter, F.J., and Peterman, R.M. 2005. Across species comparisons of spatial scales of environmental effects on survival rates of Northeast Pacific salmon. Trans. Am. Fish. Soc. 134: 86-104.
37. Quinn, T.J., II, and Deriso, R.B. 1999. Quantitative fish dynamics. Oxford University Press, New York.
38. Rodionov, S., and Overland, J.E. 2005. Application of a sequential regime shift detection method to the Bering Sea ecosystem. ICES J. Mar. Sci. 62: 328-332.
39. Schafer, J.L. 1997. Analysis of incomplete multivariate data. Monogr. Stat. Appl. Prob. No. 72. Chapman and Hall, London, U.K.
40. Spencer, P.D. 1997. Optimal harvesting of fish populations with nonlinear rates of predation and autocorrelated environmental variability. Can. J. Fish. Aquat. Sci. 54: 59-74.
41. Walters, C., and Parma, A.M. 1996. Fixed exploitation rate strategies for coping with effects of climate change. Can. J. Fish. Aquat. Sci. 53: 148-158.
42. Wilderbuer, T.K., Hollowed, A.B., Ingraham, W.J., Jr., Spencer, P.D., Conners, M.E., Bond, N.A., and Walters, G.E. 2002. Flat-fish recruitment response to decadal climatic variability and ocean conditions in the eastern Bering Sea. Prog. Oceanogr. 55: 235-247.
43. Williams, E.H., and Quinn, T.J., II. 2000. Pacific herring, Clupea pallasi, recruitment in the Bering Sea and north-east Pacific Ocean, I: relationships among different populations. Fish. Oceanogr. 9:285-299.
44. Wood, S.N. 2000. Modelling and smoothing parameter estimation with multiple quadratic penalties. J. R. Statist. Soc. B, 62: 413-428.