Genetic variation of the razor clam Ensis siliqua (Jeffreys, 1875) along the European coast based on random amplified polymorphic DNA markers

Aquaculture Research

Volumn 38, Issue 11, 2007, Pages 1205-1212

  Fernández Tajes, Juan ^a   Gaspar, Miguel ^b   Martínez Patiño, Dorotea ^c   McDonough, Niall ^d   Roberts, Dai ^d   González Tizón, Ana ^a   Martínez Lage, Andrés ^a   Méndez, Josefina ^a  

^a UNIVERSITY OF A CORUÑA   (Spain)

^b INSTITUTO PORTUGUÊS DO MAR E DA ATMOSFERA   (Portugal)

^c Centro de Cultivos Marinos   (Spain)

^d QUEEN'S UNIVERSITY BELFAST   (United Kingdom)

Author keywords

Ensis siliqua; Genetic variation; RAPD; Razor clam

Indexed keywords

COASTAL ZONE; GENETIC DIFFERENTIATION; GENETIC MARKER; GENETIC VARIATION; GEOGRAPHICAL VARIATION; MOLLUSC;

BIVALVIA; ENSIS SILIQUA; SOLENIDAE;

EID: 34548072648     PISSN: 1355557X     EISSN: 13652109     Source Type: Journal    
DOI: 10.1111/j.1365-2109.2007.01792.x     Document Type: Article

References (41)

1. Apostol B.L., Black W.C., Reiter P. Miller B.R. (1996) Population genetics with RAPD-PCR markers: the breeding structure of Aedes aegypti in Puerto Rico. Heredity 76, 325 334.
2. Armbruster G. (1997) Genetische verarmung aufgrund von populationseinbrüchen: Eine analyse bei der seltenen landschneckenart Cochlicopa ninens (Gallenstein, 1848). Nature Landscape 72, 444 446.
3. Armbruster G. (1998) Bei einer verbreiteten landschnecke Cochlicopa lubrica (O. F. Müller), wird die frequenz von molekularem phänotypen durch selbstbefruchtung und habitatspezifische selektion beeinflubt. Laufener Seminarbeiträge 2/98 der Bayerischen Akademie für Naturschutz und landschaftspflege (ANL) 39 49.
4. Bachmann K. (1997) Nuclear DNA markers in plant biosystematic research. Opera botanica 132, 137 148.
5. Barreiro R., Couceiro L., Quintela M. Ruiz J.M. (2006) Population genetic structure of the prosobranch Nassarius reticulates (L.) in a ria seascape (NW Iberian Peninsula) as revealed by RAPD analysis. Marine Biology 148, 1051 1060.
6. Casu M., Maltagliati F., Cossu P., Lai T., Galletti M.C., Castelli A. Commito J.A. (2005) Fine-grained spatial genetic structure in the bivalve Gemma gemma from Maine and Virginia (USA), as revealed by inter-simple sequence repeat markers. Journal of Experimental Marine Biology and Ecology 325, 46 54.
7. Darriba S., San Juan F. Guerra A. (2005) Gametogenic cycle of Ensis siliqua (Linnaeus, 1758) in Ria de Corcubión, Northwestern Spain. Journal of Molluscan Studies 71, 47 51.
8. de Wolf H., Backeljau T. Verhagen R. (1998) Congruence between allozyme and RAPD data in assessing macrogeographical genetic variation in the periwinkle Littorina striata (Mollusca, Gastropoda). Heredity 81, 586 492.
9. Gaspar M.B. Monteiro C.C. (1998) Reproductive cycles of the razor clam Ensis siliqua and the clam Venus striatula of Vilamorura, southern Portugal. Journal of the Marine Biological Association of the United Kingdom 78, 1247 1258.
10. Gaspar M.B., Castro M. Monteiro C.C. (1999) Effect of tooth spacing and mesh size on the catch of the Portuguese clam and razor clam dredge. ICES Journal of Marine Science 56, 103 110.
11. Guttman S.I. Berg D. (1998) Changes in the genetic diversity of aquatic organisms in the great lakes: causes and consequences. Setac News 23 24.
12. Hassanien H.A., Elnady M., Obeida A. Itriby H. (2004) Genetic diversity of Nile tilapia populations revealed by randomly amplified polymorphic DNA (RAPD). Aquaculture Research 35, 587 593.
13. Hauser L.A. Crovello T.J. (1982) Numerical analysis of genetic relationships in Thelypodieae (Brassicaceae). Systematic Botany 7, 249 268.
14. Heipel D.A., Bishop J.D., Brand A.R. Thorpe J.P. (1998) Population gnetic differentiation of the great scallop Pecten maximus in Western Britain investigated by randomly amplified polymorphism DNA. Marine Ecology Progress Series 162, 163 171.
15. Holmes S.P., Witbaard R. van der Meer J. (2003) Phenotypic and genotypic population differentiation in the bivalve mollusk Arctica islandica: results from RAPD analysis. Marine Ecology Progress Series 254, 163 176.
16. Holmes S.P., Dekker R. Williams I.D. (2004) Population dynamics and genetic differentiation in the bivalve mollusc Abra tenuis: aplanic dispersal. Marine Ecology Progress Series 268, 131 140.
17. Holmes S.P. Miller N. (2006) Aspects of the ecology and population genetics of the bivalvia Corbula gibba. Marine Ecology Progress Series 315, 129 140.
18. Huang B.X., Peakall R. Hanna P.J. (2000) Analysis of genetic structure of blacklip abalone (Haliotis rubra) populations using RAPD, minisatellite and microsatellite markers. Marine Biology 136, 207 216.
19. Kennedy R.J. Roberts D. (2006) Commercial oyster stocks as a potential source of larvae in the regeneration of Ostrea edulis in Strangford Lough, Northern Ireland. Journal of the Marine Biological Association of the United Kingdom 86, 153 159.
20. Klinbunga S., Khamnamtong N., Puanglarp N., Tassanakajon A., Jarayabhand P., Hirono I., Aoki T. Menasveta P. (2003) Genetic diversity and molecular markers of the tropical abalone (Haliotis asinia) in Thailand. Marine Biotechnology 5, 507 517.
21. Li Ma X., Cowles D.L. Carter R.L. (2000) Effect of pollution on genetic diversity in the bay mussel Mytilus galloprovincialis and the acorn barnacle Balanus glandula. Marine Environmental Research 50, 559 563.
22. Mamuris Z., Stamatis C. Triantaphyllidis C. (1999) Intraspecific genetic variation of striped red mullet (Mullus surmuletus L.) in the Mediterranean Sea assessed by allozyme and random amplified polynorphic DNA. Heredity 83, 30 38.
23. Martínez-Patiño D. (2002). Estudio de los solénidos, Solen marginatus (Pennánt, 1777) y Ensis siliqua (Linné, 1758), de los bancos naturales de la Ría de Ortigueira y Ría del Barquero: ciclo gametogénico, composición bioquímica y cultivo larvario. PhD Thesis, University of Santiago de Compostela, Santiago de Compostela, Spain.
24. Miller M.P. (1997). Tools for Population Genetic Analyses (TFPGA) 1.3: a Windows Program for the Analysis of Allozyme and Molecular Population Genetic Data. Computer software distributed by author.
25. Nei M. (1978) Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics 89, 583 590.
26. Nei M. (1987) Molecular Evolutionary Genetics. Columbia University Press, New York, NY, USA.
27. Patwary M.U., Kenchington E.L., Bird C.J. Zouros E. (1994) The use of random amplified polymorphic DNA markers in genetic studies of the sea scallop Placopecten magellanicus (Gmellin, 1791). Journal of Shellfish Research 13, 547 553.
28. Peakall R. Smouse P.E. (2006) GENEALEX 6: genetic analysis in Excel. Population genetic software for teaching and research. Molecular Ecology Notes 6, 288 295.
29. Slatkin M. (1985) Gene flow in natural populations. Annual Reviews of Ecology and Systematics 16, 393 430.
30. Slatkin M. (1987) Gene flow and the geographic structure of natural populations. Science 236, 187 792.
31. Slatkin M. (1993) Isolation by distance in equilibrium and nonequilibrium populations. Evolution 47, 264 279.
32. Sofia S.H., Silva C.R.M., Galindo B.A., Almeida F.S., Sodré L.M.K. Cláudia B.R.M. (2006) Population genetic structure of Astyanax scabripinnis (Teleostei, Characidae) from an urban stream. Hydrobiologia 553, 245 254.
33. Star B., Apte S. Gardner J.P.A. (2003) Genetic structuring among populations of the greenshell mussel Perna canaliculus revealed by analysis of randomly amplified polymorphic DNA. Marine Ecology Progress Series 249, 171 182.
34. Toro J.E., Ojeda J.A. Vergara A.M. (2004) The genetic structure of Mytilus chilensis (Hupe 1854) populations along the Chilean coast based on RAPDs analysis. Aquaculture Research 35, 1466 1471.
35. Welsh J. McClelland M. (1990) Fingerprinting genomes using PCR with arbitrary primers. Nucleic Acids Research 18, 7213 7218.
36. m+1). Heredity 82, 117 125.
37. Williams J.G.K., Kubelik A.R., Livak K.J., Rafalski J.A Tingey S.V. (1990) DNA polymorphism amplified by arbitray primers are useful as genetic markers. Nucleic Acids Research 18, 6531 6535.
38. Wright S. (1951) The genetic structure of populations. Annals of Eugenics 15, 323 354.
39. Wright S. (1978) Variability within and among natural populations. In : Evolution and the Genetics of Populations, Vol. 2. University of Chicago Press, Chicago, IL, USA.
40. Yeh F.C., Yang R.C., Boyle T.B.J., Ye Z.H. Mao J.X. (1997) POPGENE, the User-Friendly Shareware for Population Genetic Analysis. Molecular Biology and Biotechnology Center, University of Alberta, Edmonton, AB, Canada.
41. Zhou X.F., Faktor O., Applebaum S.W. Coll M. (2000) Population structure of the pestiferous moth Helicoverpa armigera in the Eastern Mediterranean using RAPD analysis. Heredity 83, 251 256.