Morphological and molecular genetic characterization of Cryptoperidiniopsis brodyi (Dinophyceae) from Australia-wide isolates

Harmful Algae

Volumn 6, Issue 5, 2007, Pages 718-733

  Park, Tae Gyu ^a   Bolch, Christopher J S ^a   Hallegraeff, Gustaaf M ^a  

^a UNIVERSITY OF TASMANIA   (Australia)

Author keywords

Cryptoperidiniopsis brodyi; Dinoflagellates; Pfiesteria piscicida; Pfiesteria shumwayae; Real time PCR; Taxonomy

Indexed keywords

CRYPTOPERIDINIOPSIS SP. CCMP1828; DINOPHYCEAE; PFIESTERIA; PFIESTERIA PISCICIDA; PFIESTERIA SHUMWAYAE;

EID: 34548024372     PISSN: 15689883     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.hal.2007.02.004     Document Type: Article

References (63)

1. Adachi M., Sako Y., and Ishida Y. Restriction fragment length polymorphism of ribosomal DNA internal transcribed spacer and 5 8S regions in Japanese Alexandrium species (Dinophyceae). J. Phycol. 30 (1994) 857-863
2. Babinchak J.A., Doucette G.J., and Ball R.M. Partial characterization of the LSU rRNA gene from the ciguatoxic dinoflagellate Gambierdiscus toxicus. In: Yasumoto T., Oshima Y., and Fukuyo Y. (Eds). Harmful and Toxic Algal Blooms (1996), UNESCO, Paris 459-462
3. Bolch C.J.S. PCR protocol for genetic identification of dinoflagellates directly from single cysts and plankton cells. Phycologia 40 (2001) 162-168
4. Bolch C.J.S., Blackburn S.I., Hallegraeff G.M., and Vaillancourt R.E. Genetic variation among strains of the toxic dinoflagellate Gymnodinium catenatum (Dinophyceae). J. Phycol. 35 (1999) 356-367
5. Bowers H.A., Tengs T., Glasgow H.B., Burkholder J.M., Rublee P.A., and Oldach D.W. Development of real-time PCR assays for rapid detection of Pfiesteria piscicida and related dinoflagellates. Appl. Environ. Microbiol. 66 (2000) 4641-4648
6. Bowers H.A., Trice T.M., Magien R.E., Goshorn D.M., Michael B., Schaefer E.F., Rublee P.A., and Oldach D.W. Detection of Pfiesteria spp. by PCR in surface sediments collected from Chesapeake Bay tributaries (Maryland). Harmful Algae 5 (2006) 342-351
7. Burkholder J.M., Noga E.J., Hobbs C.H., Glasgow H.B., and Smith Jr. S.A. New 'phantom' dinoflagellate is the causative agent of major estuarine fish kills. Nature 358 (1992) 407-410
8. Burkholder J.M., Glasgow H.B., and Deamer-Melia N.J. Overview and present status of the toxic Pfiesteria complex. Phycologia 40 (2001) 106-134
9. Cembella A.D., Antia N.J., and Harrison P.J. The utilization of inorganic and organic phosphorus compounds as nutrients by eukaryotic microalgae: a multidisciplinary perspective part 2. CRC Crit. Rev. Microbiol. 11 (1984) 13-81
10. Davidovich N.A., and Bates S.S. Sexual reproduction in the pennate diatom Pseudo-nitzschia multiseries and P. pseudodelicatissima (Bacillariophyceae). J. Phycol. 34 (1998) 126-137
11. Doblin M.A., Drake L.A., Coyne K.J., Rublee P.A., and Dobbs F.C. In: Steidinger K.A., Landsberg J.L., Tomas C.R., and Vargo G.A. (Eds). Pfiesteria Species Identified in Ships' Ballast Water and Residuals: a Possible Vector for Introductions to Coastal Areas (2004), Harmful Algae 2002. Florida Fish and Wildlife Conservation Commission, Florida Institute of Oceanography and Inter-governmental Oceanographic Commission of UNESCO, St. Petersburg, FL, USA 317-319
12. Drake L.A., Meyer A.E., Forsberg R.L., Baier R.E., Doblin M.A., Heinemann S., Johnson W.P., Koch M., Rublee P.A., and Dobbs F.C. Potential invasion of microorganisms and pathogens via "interior hull fouling": biofilms inside ballast-water tanks. Biol. Invasions 7 (2005) 969-982
13. Felsenstein J. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39 (1985) 783-791
14. Fensome R.A., Taylor F.J.R., Norris G., Sarjeant W.A.S., Wharton D.I., and Williams G.L. A Classification of Fossil and Living Dinoflagellates (1993), American Museum of Natural History, New York Micropaleont Special, Publ 7
15. Gallagher J.C. Physiological variation and electrophoretic banding patterns of genetically different seasonal populations of Skeletonema costatum (Bacillariophyceae). J. Phycol. 18 (1982) 148-162
16. Gallagher J.C. Genetic variation in harmful algal bloom species: an evolutionary ecology approach. In: Anderson D.M., Cembella A.D., and Hallegraeff G.M. (Eds). Physiological Ecology of Harmful Algal Blooms (1998), Springer-Verlag, Berlin 225-242 NATO-ASI series 41
17. Glasgow H.B., Burkholder J.M., Morton S.L., and Springer J. A second species of toxic Pfiesteria. Phycologia 40 (2001) 234-245
18. Hallegraeff G.M. Taxonomic principles. In: Hallegraeff G.M., Anderson D.M., and Cembella A.D. (Eds). Manual on Harmful Marine Microalgae. UNESCO, Monographs on Oceanographic Methodology II (2003) 383-388
19. Huelsenbeck J.P., and Ronquist F. MrBayes: Bayesian inference of phylogeny. Bioinformatics 17 (2001) 754-755
20. Jeong H.J., Kim J.S., Park J.Y., Kim J.H., Kim S., Lee I., Lee S.H., Ha J.H., and Yih W.H. Stoeckeria algicida n. gen., n. sp (Dinophyceae) from the costal waters off Southern Korea: Morphology and small subunit ribosomal DNA gene sequence. J. Eukaryot. Microbiol. 52 (2005) 382-390
21. Lajeunesse T.C. Investigation on the biodiversity, ecology, and phylogeny of endosymbiotic dinoflagellates in the genus Symbiodinium using the ITS region: In search of a "species" level marker. J. Phycol. 37 (2001) 866-880
22. Lewitus A.J., Hayes K.C., Willis B.M., Burkholder J.M., Glasgow Jr. H.B., Holland A.F., Maier P.P., Rublee P.A., and Magnien R. Low abundance of the dinoflagellates, Pfiesteria piscicida, P. shumwayae, and Cryptoperidiniopsis spp., in South Carolina tidal creeks and open estuaries. Estuaries 25 (2002) 586-597
23. Litaker R.W., Tester P.A., Colomi A., Levy M.G., and Noga E.J. The phylogenetic relationship of Pfiesteria piscicida, Cryptoperidiniopsoid sp., Amyloodinium ocellatum and a Pfiesteria-like dinoflagellate to other dinoflagellates and apicomplexans. J. Phycol. 35 (1999) 1379-1389
24. Litaker R.W., Vandersea M.W., Kibler S.R., Reece K.S., Stokes N.A., Steidinger K.A., Millie D.F., Bendis B.J., Pigg R.J., and Tester P.A. Identification of Pfiesteria piscicida (Dinophyceae) and Pfiesteria-like organisms using internal transcribed spacer-specific PCR assays. J. Phycol. 39 (2003) 754-761
25. Litaker R.W., Steidinger K.A., Mason P.L., Landsberg J.H., Shields J.D., Reece K.S., Haas L.W., Vogelbein W.K., Mark W.V., Kibler S.R., and Tester P.A. The reclassification of Pfiesteria shumwayae (Dinophyceae): Pseudopfiesteria, gen. nov. J. Phycol. 41 (2005) 643-651
26. Marshall H.G., Seaborn D., and Wolny J. Monitoring result for Pfiesteria piscicida and Pfiesteria-like organisms from Virginia waters in 1998. Virginia J. Sci. 50 (1999) 287-298
27. Marshall H.G., Hargraves P.E., Burkholder J.M., Parrow M.W., Elbrächter M., Allen E.H., Knowlton V.M., Rublee P.A., Hynes W.L., Egerton T.A., Remington D.L., Wyatt K.B., Lewitus A.J., and Henrich V.C. Taxonomy of Pfiesteria (Dinophyceae). Harmful Algae 5 (2006) 481-496
28. Mason P.L., Vogelbein W.K., Haas L.W., and Shields J.D. An improved stripping technique for lightly armored dinoflagellates. J. Phycol. 39 (2003) 253-258
29. Mitrovic S.M., Amandi M.F., Mckenzie L., Furey A., and James K.J. Effects of selenium, iron and cobalt addition to growth and yessotoxin production of the toxic marine dinoflagellate Protoceratium reticulatum in culture. J. Exp. Mar. Biol. Ecol. 313 (2004) 337-351
30. Nylander J.A.A. MrModeltest v2 Program distributed by the author (2004), Evolutionary Biology Centre, Uppsala University, Uppsala, Sweden
31. Oldach D., Delwiche C.F., Jakobsen K.S., Tengs T., Brown E.G., Kempton J.W., Schaefer E.F., Bowers H.A., Glasgow H.B., Burkholder J.M., Steidinger K.A., and Rublee P.A. Heteroduplex mobility assay-guided sequence discovery: elucidation of the small subunit (18S) rRNA sequences of Pfiesteria piscicida and related dinoflagellates from complex algal culture and environmental sample DNA pools. Proc. Natl. Acad. Sci. USA 97 (2000) 4303-4308
32. Park, T.G., de Salas, M.F., Bolch, C.J. S., Hallegraeff, G.M., 2007. Development of real-time PCR for quantification of the heterotrophic dinoflagellate Cyrptoperidiniopsis brodyi (Dinophyceae) in environmental samples. Appl. Environ. Microbiol. 73 (8), in press.
33. Parrow M.W., and Burkholder J.M. Estuarine heterotrophic Cryptoperidiniopsoids (Dinophyceae): life cycle and culture studies. J. Phycol. 39 (2003) 678-696
34. Parrow M.W., and Burkholder J.M. The sexual life cycles of Pfiesteria piscicida and Cryptoperidiniopsoids (Dinophyceae). J. Phycol. 40 (2004) 664-673
35. Penna A., Vila M., Fraga S., Giacobbe M.G., Andreoni F., Riobó P., and Vernesi C. Characterization of Ostreopsis and Coolia (Dinophyceae) isolates in the Western Mediterranean sea based on morphology, toxicity and internal transcribed spacer 5.8S rDNA sequences. J. Phycol. 41 (2005) 212-225
36. Posada D., and Crandall K.A. Modeltest: testing the model of DNA substitution. Bioinformatics 14 (1998) 817-818
37. Rhodes L.L., Burkholder J.M., Glasgow H.B., Rublee P.A., Allen C., and Adamson J.E. Pfiesteria shumwayae (Pfiesteriaceae) in New Zealand. N. Z. J. Mar. Freshw. Res. 36 (2002) 621-630
38. Rhodes L.L., Adamson J.E., Rublee P.A., and Schaefer E. Geographic distribution of Pfiesteria spp. (Pfiesteriaceae) in Tasman Bay and Canterbury New Zealand (2002-03). N. Z. J. Mar. Freshw. Res. 40 (2006) 211-220
39. Rublee P.A., Kempton J.W., Schaefer E.F., Allen C., Harris J., Oldach D.W., Bowers H., Tengs T., Burkholder J.M., and Glasgow H.B. Use of molecular probes to assess geographic distribution of Pfiesteria species. Environ. Health Perspect. 109 (2001) 765-767
40. Rublee P.A., Allen C., Schaefer E., Rhodes L., Adamson J., Lapworth C., Burkholder J., and Glasgow H. In: Steidinger K.A., Landsberg J.H., Tomas C.R., and Vargo G.A. (Eds). Global Distribution of Toxic Pfiesteria Complex Species Detected by PCR Assay (2004), Harmful Algae, 2002. Florida fish and wildlife conservation commission, Florida Institute of Oceanography and Intergovernmental Oceanographic Commission of UNESCO, St. Petersburg, FL, USA 320-322
41. Rublee P.A., Remington D.L., Schaefer E.F., and Marshall M.M. Detection of the dinozoans Pfiesteria piscicida and P. shumwayae: A review of detection methods and geographic distribution. J. Eukaryot. Microbiol. 52 (2005) 83-89
42. Rublee P.M., Nuzzi R., Waters R., Schaefer E.F., and Burkholder J.M. Pfiesteria piscicida and Pfiesteria shumwayae in coastal waters of Long island, New York USA. Harmful Algae 5 (2006) 374-379
43. Rynearson T.A., and Armbrust E.V. Genetic differentiation among populations of the planktonic marine diatom Ditylum brightwellii (Bacillariophyceae). J. Phycol. 40 (2004) 34-43
44. Scholin C.A., Villac M.C., Buck K.R., Krupp J.M., Powers D.A., Fryxell G.A., and Chavez F.P. Ribosomal DNA sequences discriminate among toxic and non-toxic Pseudonitzschia species. Nat. Toxins 2 (1994) 152-165
45. Scholin C.A., Herzog M., Sogin M., and Anderson D.M. Identification of group and strain-specific genetic markers for globally distributed Alexandrium (Dinophyceae); Sequence analysis of a fragment of the LSU rRNA gene. J. Phycol. 30 (1994) 999-1011
46. Scholin C.A., Hallegraeff G.M., and Anderson D.M. Molecular evolution of the Alexandrium tamarense "species complex" (Dinophyceae): dispersal in the North American and West Pacific regions. Phycologia 34 (1995) 472-485
47. Scholin C., Vrieling E., Peperzak L., Rhodes L., and Rublee P. Detection of HAB species using lectin, antibody and DNA probes. In: Hallegraeff G.M., Anderson D.M., and Cembella A.D. (Eds). Manual on Harmful Marine Microalgae. UNESCO Monographs on Oceanographic Methodology II (2003) 131-164
48. Seaborn D.W., Tengs T., Cerbin S., Kokocinski M., and Marshall H.G. A group of dinoflagellates similar to Pfiesteria as defined by morphology and genetic analysis. Harmful Algae 5 (2006) 1-8
49. Skov J., Lundholm N., Pocklington R., Rosendahl S., and Moestrup Ø. Studies on the marine planktonic diatom Pseudo-nitzschia 1. Isozyme variation among isolates of P. pseudodelicatissima during a bloom in Danish coastal waters. Phycologia 36 (1997) 374-380
50. Smalley G.W., Coats D.W., and Stoecker D.K. Feeding in the mixotrophic dinoflagellate Ceratium furca is influenced by intracellular nutrient concentrations. J. Eukaryot. Microbiol. 262 (2003) 137-151
51. Smith S.A., Noga E.J., and Bullis R.A. Mortality in Tilapia aurea due to a toxic dinoflagellate bloom. Proceedings of the Third International Colloquium of Pathology in Marine Aquaculture. Gloucester, Virginia (1988) 167-168
52. Springer J.J., Shumway S.E., Burkholder J.M., and Glasgow H.B. Interaction between the toxic estuarine dinofalgellate Pfiesteria piscicida and two species of bivalve mollusks. Mar. Ecol. Prog. Ser. 245 (2002) 1-10
53. Steidinger K.A., Burkholder J.M., Glasgow H.B., Hobbs C.W., Garret J.K., Truby E.W., Noga E.J., and Smith S.A. Pfiesteria piscicida gen. et. sp. nov. (Pfiesteriaceae fam. nov.), a new toxic dinoflagellate with a complex life cycle and behavior. J. Phycol. 32 (1996) 157-164
54. Steidinger K.A., Landsberg J.H., Truby E.W., and Blakesley B.A. The use of electron microscopy in identifying small 'gymnodinioid' dinoflagellates. Nova Hedw. 112 (1996) 415-422
55. Steidinger K.A., Landsberg J., Richardson R.W., Truby E., Blakesley B., Scott P., Tester P., Tengs T., Mason P., Morton S., Seaborn D., Litaker W., Reece K., Oldach D., Haas L., and Vasta G. Classification and identification of Pfiesteria and Pfiesteria-like species. Environ. Health Perspect. 109 (2001) 661-665
56. Steidinger K.A., Landsberg J.H., Mason P.L., Vogelbein W.K., Tester P.A., and Litaker R.W. Cryptoperidiniopsis brodyi gen. et sp. nov. (Dinophyceae) a small lightly armored dinoflagellate in the Pfiesteriaceae. J. Phycol. 42 (2006) 951-961
57. Sullivan B.E., and Anderson R.A. Salinity tolerances of 62 strains of Pfiesteria and Pfiesteria-like heterotrophic flagellates (Dinophyceae). Phycol. Res. 49 (2001) 207-214
58. Swofford, D. L., 1999. PAUP*. Phylogenetic Analysis Using Parsimony (and Other Methods). Version 4.0. Sinauer Associates, Sunderland, MA.
59. Tango P., Magnien R., Goshorn D., Bowers H., Michael B., Karrh R., and Oldach D. Associations between fish heath and Pfiesteria spp. in Chesapeake Bay and mid-Atlantic estuaries. Harmful Algae 5 (2006) 352-362
60. Taylor F.J.R. Morphology (tabulation) and molecular evidence for dinoflagellate phylogeny reinforce each other. J. Phycol. 35 (1999) 1-6
61. Taylor 'Max' F.J.R. Illumination or confusion? Dinoflagellate molecular phylogenetic data viewed from a primarily morphological standpoint. Phycol. Res. 52 (2004) 308-324
62. Taylor F.J.R., Fukuyo Y., Larsen J., and Hallegraeff G.M. Taxonomy of harmful dinoflagellates. In: Hallegraeff G.M., Anderson D.M., and Cembella A.D. (Eds). Manual on Harmful Marine Microalgae. UNESCO Monographs on Oceanographic Methodology II (2003) 389-432
63. Thompson J.D., Gibson T.J., Plewnaik F., Jeanmougin F., and Higgins D.G. The CLUSTAL X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 25 (1997) 4876-4882