Peroxiredoxin 6 gene: A new physiological and genetic indicator of multiple environmental stress response in Pacific oyster Crassostrea gigas

Aquatic Toxicology

Volumn 84, Issue 3, 2007, Pages 389-398

  David, E ^a   Tanguy, A ^b   Moraga, D ^a  

^a INSTITUT UNIVERSITAIRE EUROPÉEN DE LA MER   (France)

^b STATION BIOLOGIQUE DE ROSCOFF   (France)

Author keywords

Crassostrea gigas; Environmental stress; Gene expression; Peroxiredoxin 6; Polymorphism

Indexed keywords

PEROXIREDOXIN; PEROXIREDOXIN 6; UNCLASSIFIED DRUG;

BIVALVE; DNA; ENVIRONMENTAL STRESS; GENE EXPRESSION; PHYLOGENETICS; POLYMORPHISM;

ANIMAL EXPERIMENT; ARTICLE; CONTROLLED STUDY; CRASSOSTREA GIGAS; ENVIRONMENTAL STRESS; GENETIC ANALYSIS; GENETIC POLYMORPHISM; NONHUMAN; NUCLEOTIDE SEQUENCE; OYSTER; PRIORITY JOURNAL; PROTEIN EXPRESSION; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; WATER CONTAMINATION;

AMINO ACID SEQUENCE; ANIMALS; BASE SEQUENCE; CLONING, MOLECULAR; CRASSOSTREA; GILLS; MOLECULAR SEQUENCE DATA; PEROXIDASES; PHYLOGENY; POLYMORPHISM, SINGLE NUCLEOTIDE; POLYMORPHISM, SINGLE-STRANDED CONFORMATIONAL; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, DNA; STATISTICS, NONPARAMETRIC; WATER POLLUTANTS, CHEMICAL;

CRASSOSTREA GIGAS; INVERTEBRATA; OSTREIDAE; VERTEBRATA;

EID: 34547925595     PISSN: 0166445X     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.aquatox.2007.06.017     Document Type: Article

References (48)

1. Barton N.H. Genetic hitchhiking. Philos. Trans. R. Soc. Lond. B: Biol. Sci. 355 (2000) 1553-1562
2. Belkhir N.M., Borsa P., Goudet P., and Bonhomme F. GENETIX, logiciel sous Windows pour la génétique des populations. Laboratoire Génome et Populations. CNRS UPR 9060 (1996), Université de Montpellier II, Montpellier, France
3. Castric V., Bernatchez L., Belkhir K., and Bonhomme F. Heterozygote deficiencies in small lacustrine populations of brook charr Salvelinus fontinalis Mitchill (Pisces, Salmonidae): a test of alternative hypotheses. Heredity 89 (2002) 27-35
4. Chae H.Z., Robison K., Poole L.B., Church G., Storz G., and Rhee S.G. Cloning and sequencing of thiol-specific antioxidant from mammalian brain: alkyl hydroperoxide reductase and thiol-specific antioxidant define a large family of antioxidant enzymes. Proc. Natl. Acad. Sci. U.S.A. 91 (1994) 7017-7021
5. Choi H.J., Kang S.W., Yang C.H., Rhee S.G., and Ryu S.E. Crystal structure of a novel human peroxidase enzyme at 2.0 A resolution. Nat. Struct. Biol. 5 (1998) 400-406
6. David P., and Jarne P. Context-dependent survival differences among electrophoretic genotypes in natural populations of the marine bivalve Spisula ovalis. Genetics 146 (1997) 335-344
7. David E., Tanguy A., Pichavant K., and Moraga D. Response of the Pacific oyster Crassostrea gigas to hypoxia exposure under experimental conditions. FEBS J. 272 (2005) 5635-5652
8. De Nicola M., Gambardella C., and Guarino S.M. Interactive effects of cadmium and zinc pollution on PGI and PGM polymorphisms in Idotea baltica. Mar. Pollut. Bull. 24 (1992) 619-621
9. Depledge M.H. Genetic ecotoxicology: an overview. J. Exp. Mar. Biol. Ecol. 200 (1996) 57-66
10. Fisher A.B., Dodia C., Manevich Y., Chen J.-W., and Feinstein S.I. Phospholipid hydroperoxides are substrates for non-selenium glutathione peroxidase. J. Biol. Chem. 274 (1999) 21326-21334
11. Forbes V.E., and Depledge M.H. Environmental stress and the distribution of traits within populations. In: Baird D.J., Maltby L., Greig-Smith P.W., and Douben P.E.T. (Eds). Ecotoxicology: Ecological Dimensions (1996), Chapman & Hall, London 71-86
12. Gentili M.R., and Beaumont A.R. Environmental stress, heterozygosity, and growth rate in Mytilus edulis L. J. Exp. Mar. Biol. Ecol. 120 (1988) 145-153
13. Gillespie R.B., and Guttman S.I. Correlations between water quality and frequencies of allozyme genotypes in spotfin shiner (Notropis spilopteris) populations. Environ. Pollut. 81 (1993) 147-150
14. Hawkins A.J.S., Bayne B.L., Day A.J., Rusin J., and Worrall C.M. Genotype-dependant interrelation between energy metabolism, protein metabolism and fitness. In: Ryland J.S., and Tyler P.A. (Eds). Reproduction, Genetics and Distributions of Marine Organisms (1989), Fredensborg, Denmark 283-292
15. Hofmann B., Hecht H.J., and Flohe L. Peroxiredoxins. Biol. Chem. 383 (2002) 347-364
16. Holley M.E., and Foltz D.W. Effect of multiple-locus heterozygosity and salinity on clearance rate in a brackish-water clam, Rangia cuneata (Sowerby). J. Exp. Mar. Biol. Ecol. 111 (1987) 121-131
17. Kang S.W., Baines I.C., and Rhee S.G. Characterization of a mammalian peroxiredoxin that contains one conserved cysteine. J. Biol. Chem. 273 (1998) 6303-6311
18. Kim I., Lee K.S., Hwang J.S., Ahn M.Y., Li J., Sohn H.D., and Jin B.R. Molecular cloning and characterization of a peroxiredoxin gene from the mole cricket, Gryllotalpa orientalis. Comp. Biochem. Physiol. B: Biochem. Mol. Biol. 140 (2005) 579-587
19. Kim T.B., Cho Y.S., Park C.S., Lee K.Y., and Moon H.B. Association between peroxiredoxin (PRDX) VI gene polymorphism and asthma and its intermediate phenotypes. J. Allergy Clin. Immunol. 117 (2006) S198
20. Kubo E., Miyazawa T., Fatma N., Akagi Y., and Singh D.P. Development- and age-associated expression pattern of peroxiredoxin 6, and its regulation in murine ocular lens. Mech. Ageing Dev. 127 (2006) 249-256
21. Kumar S., Tamura K., and Nei M. MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief. Bioinform. 5 (2004) 150-163
22. Lenfant P. Heterozygotie et valeur selective: le cas du poisson marin, Diplodus sargus (Linne, 1758): Heterozygosity and fitness: the case of marine fish, Diplodus sargus (Linne, 1758). C.R. Biologies 325 (2002) 239-252
23. Lessios H.A. Testing electrophoretic data for agreement with Hardy-Weinberg expectations. Mar. Biol. 112 (1992) 517-523
24. Leyens G., Donnay I., and Knoops B. Cloning of bovine peroxiredoxins-gene expression in bovine tissues and amino acid sequence comparison with rat, mouse and primate peroxiredoxins. Comp. Biochem. Physiol. B: Biochem. Mol. Biol. 136 (2003) 943-955
25. Ma X.L., Cowles D.L., and Carter R.L. Effect of pollution on genetic diversity in the bay mussel Mytilus galloprovincialis and the acorn barnacle Balanus glandula. Mar. Environ. Res. 50 (2000) 559-563
26. Mallet A.L., Zouros E., Gartner-Kepkay K.E., Freeman K.R., and Dickie L.M. Larval viability and heterozygote deficiency in populations of marine bivalves: evidence from pair matings of mussels. Mar. Biol. 87 (1985) 165-172
27. Manevich Y., and Fisher A.B. Peroxiredoxin 6, a 1-Cys peroxiredoxin, functions in antioxidant defense and lung phospholipid metabolism. Free Radic. Biol. Med. 38 (2005) 1422-1432
28. Marchand J., Tanguy A., Laroche J., Quiniou L., and Moraga D. Responses of European flounder Platichthys flesus populations to contamination in different estuaries along the Atlantic coast of France. Mar. Ecol. Prog. Ser. 260 (2003) 273-284
29. Maynard Smith J., and Haigh J. The hitch-hiking effect of a favorable gene. Genet. Res. 23 (1974) 23-35
30. Menesguen A., Aminot A., Belin C., Chapelle A., Guillaud J.-F., Joanny M., Lefebvre A., Merceron M., Piriou J.-Y., and Souchu P. L'eutrophisation des eaux marines et saumâtres en Europe, en particulier en France (2001), IFREMER
31. Moraga D., Mdelgi-Lasram E., Romdhane M.S., El Abed A., Boutet I., Tanguy A., and Auffret M. Genetic responses to metal contamination in two clams: Ruditapes decussatus and Ruditapes philippinarum. Mar. Environ. Res. 54 (2002) 521-525
32. Munz B., Frank S., Hubner G., Olsen E., and Werner S. A novel type of glutathione peroxidase: expression and regulation during wound repair. Biochem. J. 326 Pt 2 (1997) 579-585
33. Radyuk S.N., Klichko V.I., Spinola B., Sohal R.S., and Orr W.C. The peroxiredoxin gene family in Drosophila melanogaster. Free Radic. Biol. Med. 31 (2001) 1090-1100
34. Raymond M., and Rousset F. GENEPOP (Version 1.2): population genetics software for exact tests and ecumenicism. J. Hered. 86 (1995) 248-249
35. Regoli F., Gorbi S., Frenzilli G., Nigro M., Corsi I., Focardi S., and Winston G.W. Oxidative stress in ecotoxicology: from the analysis of individual antioxidants to a more integrated approach. Mar. Environ. Res. 54 (2002) 419-423
36. Regoli F., Winston G.W., Gorbi S., Frenzilli G., Nigro M., Corsi I., and Focardi S. Integrating enzymatic responses to organic chemical exposure with total oxyradical absorbing capacity and DNA damage in the European eel Anguilla anguilla. Environ. Toxicol. Chem. 22 (2003) 2120-2129
37. Rhee S.G., Chae H.Z., and Kim K. Peroxiredoxins: a historical overview and speculative preview of novel mechanisms and emerging concepts in cell signaling. Free Radic. Biol. Med. 38 (2005) 1543-1552
38. RNO, 2001. Qualité du milieu marin littoral. IFREMER, France. Available at: http://www.ifremer.fr/delao/surveillance/reseau/rno/mv.html.
39. SAGE Vilaine. Projet de schéma d'aménagement et de gestion des eaux de la Vilaine, Atlas (2000), Institut d'Aménagement de la Vilaine, La Roche Bernard, France
40. Scott T.M., and Koehn R.K. The effect of environmental stress on the relationship of heterozygosity to growth rate in the coot clam Mulinia lateralis (Say). J. Exp. Mar. Biol. Ecol. 135 (1990) 109-116
41. Strohman R.C., Moss P.S., Micou-Eastwood J., Spector D., Przybyle A., and Patterson B. Messenger RNA for myosin polypeptides: isolation from single myogenic cell cultures. Cell 10 (1977) 265-273
42. Tanguy A., Boutet I., Bonhomme F., Boudry P., and Moraga D. Polymorphism of metallothionein genes in the Pacific oyster Crassostrea gigas as a biomarker of response to metal exposure. Biomarkers 7 (2002) 439-450
43. Thompson J.D., Higgins D.G., and Gibson T.J. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22 (1994) 4673-4680
44. Tremblay R., Myrand B., Sevigny J.-M., Blier P., and Guderley H. Bioenergetic and genetic parameters in relation to susceptibility of blus mussels. J. Exp. Mar. Biol. Ecol. 221 (1998) 27-58
45. Tsuji N., Kamio T., Isobe T., and Fujisaki K. Molecular characterization of a peroxiredoxin from the hard tick Haemaphysalis longicornis. Insect Mol. Biol. 10 (2001) 121-129
46. van der Oost R., Beyer J., and Vermeulen N.P.E. Fish bioaccumulation and biomarkers in environmental risk assessment: a review. Environ. Toxicol. Pharmacol. 13 (2003) 57-149
47. Wood Z.A., Schroder E., Robin Harris J., and Poole L.B. Structure, mechanism and regulation of peroxiredoxins. Trends Biochem. Sci. 28 (2003) 32-40
48. Zouros E., and Foltz D.W. Minimal selection requirements for the correlation between heterozygosity and growth, and for the deficiency of heterozygotes, in oyster population. Dev. Genet. 4 (1983) 393-405