-
1
-
-
0034043778
-
Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis
-
Castresana, J. (2000). Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis. Mol Biol Evol 17, 540-552.
-
(2000)
Mol Biol Evol
, vol.17
, pp. 540-552
-
-
Castresana, J.1
-
2
-
-
0034725692
-
The additional 165 amino acids in the B protein of Escherichia coli DNA gyrase have an important role in DNA binding
-
Chatterji, M., Unniraman, S., Maxwell, A. & Nagaraja, V. (2000). The additional 165 amino acids in the B protein of Escherichia coli DNA gyrase have an important role in DNA binding. J Biol Chem 275, 22888-22894.
-
(2000)
J Biol Chem
, vol.275
, pp. 22888-22894
-
-
Chatterji, M.1
Unniraman, S.2
Maxwell, A.3
Nagaraja, V.4
-
3
-
-
33644700003
-
Toward automatic reconstruction of a highly resolved tree of life
-
Ciccarelli, F. D., Doerks, T., von Mering, C., Creevey, C. J., Snel, B. & Bork, P. (2006). Toward automatic reconstruction of a highly resolved tree of life. Science 311, 1283-1287.
-
(2006)
Science
, vol.311
, pp. 1283-1287
-
-
Ciccarelli, F.D.1
Doerks, T.2
von Mering, C.3
Creevey, C.J.4
Snel, B.5
Bork, P.6
-
4
-
-
33646227906
-
Pathogenic potential of novel chlamydiae and diagnostic approaches to infections due to these obligate intracellular bacteria
-
Corsaro, D. & Greub, G. (2006). Pathogenic potential of novel chlamydiae and diagnostic approaches to infections due to these obligate intracellular bacteria. Clin Microbiol Rev 19, 283-297.
-
(2006)
Clin Microbiol Rev
, vol.19
, pp. 283-297
-
-
Corsaro, D.1
Greub, G.2
-
5
-
-
0032953638
-
Emended description of the order Chlamydiales, proposal of Parachlamydiaceae fam. nov. and Simkaniaceae fam. nov., each containing one monotypic genus, revised taxonomy of the family Chlamydiaceae, including a new genus and five new species, and standards for the identification of organisms
-
Everett, K. D., Bush, R. M. & Andersen, A. A. (1999). Emended description of the order Chlamydiales, proposal of Parachlamydiaceae fam. nov. and Simkaniaceae fam. nov., each containing one monotypic genus, revised taxonomy of the family Chlamydiaceae, including a new genus and five new species, and standards for the identification of organisms. Int J Syst Bacteriol 49, 415-440.
-
(1999)
Int J Syst Bacteriol
, vol.49
, pp. 415-440
-
-
Everett, K.D.1
Bush, R.M.2
Andersen, A.A.3
-
6
-
-
0025056761
-
Muramic acid is not detectable in Chlamydia psittaci or Chlamydia trachomatis by gas chromatography-mass spectrometry
-
Foy, A., Rogers, J. C., Glibart, J., Morgan, S., Davis, C. H., Knight, S. & Wyrick, P. B. (1990). Muramic acid is not detectable in Chlamydia psittaci or Chlamydia trachomatis by gas chromatography-mass spectrometry. Infect Immun 58, 835-837.
-
(1990)
Infect Immun
, vol.58
, pp. 835-837
-
-
Foy, A.1
Rogers, J.C.2
Glibart, J.3
Morgan, S.4
Davis, C.H.5
Knight, S.6
Wyrick, P.B.7
-
7
-
-
34547872586
-
-
Garrity, G. M., Bell, J. A. & Lilburn, T. G. (2005). The Revised Road Map to the Manual. In Bergey's Manual of Systematic Bacteriology, 2, part A, Introductory Essays, pp. 159-220. Edited by D. J. Brenner, N. R. Krieg & J. T. Staley. Springer: New York.
-
Garrity, G. M., Bell, J. A. & Lilburn, T. G. (2005). The Revised Road Map to the Manual. In Bergey's Manual of Systematic Bacteriology, vol. 2, part A, Introductory Essays, pp. 159-220. Edited by D. J. Brenner, N. R. Krieg & J. T. Staley. Springer: New York.
-
-
-
-
8
-
-
0037478650
-
Complete genome sequence of the marine planctomycete Pirellula sp. strain 1
-
Glockner, F. O., Kube, M., Bauer, M., Testing, H., Lombardot T., Ludwig, W., Gade, D., Beck A., Borzym, K. & other authors (2003). Complete genome sequence of the marine planctomycete Pirellula sp. strain 1. Proc Natl Acad Sci U S A 100, 8298-8303.
-
(2003)
Proc Natl Acad Sci U S A
, vol.100
, pp. 8298-8303
-
-
Glockner, F.O.1
Kube, M.2
Bauer, M.3
Testing, H.4
Lombardot, T.5
Ludwig, W.6
Gade, D.7
Beck, A.8
Borzym, K.9
-
9
-
-
0034815478
-
The use of signature sequences in different proteins to determine the relative branching order of bacterial divisions: Evidence that Fibrobacter diverged at a similar time to Chlamydia and the Cytophaga-Flavobacterium-Bacteroides division
-
Griffiths, E. & Gupta, R. S. (2001). The use of signature sequences in different proteins to determine the relative branching order of bacterial divisions: evidence that Fibrobacter diverged at a similar time to Chlamydia and the Cytophaga-Flavobacterium-Bacteroides division. Microbiology 147, 2611-2622.
-
(2001)
Microbiology
, vol.147
, pp. 2611-2622
-
-
Griffiths, E.1
Gupta, R.S.2
-
10
-
-
2542452389
-
Signature sequences in diverse proteins provide evidence for the late divergence of the order Aquificales
-
Griffiths, E. & Gupta, R. S. (2004). Signature sequences in diverse proteins provide evidence for the late divergence of the order Aquificales. Int Microbiol 7, 41-52.
-
(2004)
Int Microbiol
, vol.7
, pp. 41-52
-
-
Griffiths, E.1
Gupta, R.S.2
-
11
-
-
23844479263
-
Conserved indels in essential proteins that are distinctive characteristics of Chlamydiales and provide novel means for their identification
-
Griffiths, F., Petrich, A. & Gupta, R. S. (2005). Conserved indels in essential proteins that are distinctive characteristics of Chlamydiales and provide novel means for their identification. Microbiology 151, 2647-2657.
-
(2005)
Microbiology
, vol.151
, pp. 2647-2657
-
-
Griffiths, F.1
Petrich, A.2
Gupta, R.S.3
-
12
-
-
33750982681
-
Chlamydiae-specific proteins and indels: Novel tools for studies
-
Gupta, R. S. & Griffiths, E. (2006). Chlamydiae-specific proteins and indels: novel tools for studies. Trends Microbiol 14, 527-535.
-
(2006)
Trends Microbiol
, vol.14
, pp. 527-535
-
-
Gupta, R.S.1
Griffiths, E.2
-
13
-
-
33845871454
-
Application of the character compatibility approach to generalized molecular sequence data: Branching order of the proteobacterial subdivisions
-
Gupta, R. S. & Sneath, P. H. A. (2006). Application of the character compatibility approach to generalized molecular sequence data: branching order of the proteobacterial subdivisions. J Mol Evol 64, 90-100.
-
(2006)
J Mol Evol
, vol.64
, pp. 90-100
-
-
Gupta, R.S.1
Sneath, P.H.A.2
-
14
-
-
2342423344
-
Illuminating the evolutionary history of chlamydiae
-
Horn, M., Collingro, A., Schmitz-Esser, S., Beier, C. L., Purkhold, U., Fartmann, B., Brandt P., Nyakatura, G. J., Droege, M. & other authors (2004). Illuminating the evolutionary history of chlamydiae. Science 304, 728-730.
-
(2004)
Science
, vol.304
, pp. 728-730
-
-
Horn, M.1
Collingro, A.2
Schmitz-Esser, S.3
Beier, C.L.4
Purkhold, U.5
Fartmann, B.6
Brandt, P.7
Nyakatura, G.J.8
Droege, M.9
-
15
-
-
0035346296
-
Phylogenetic analysis of evolutionary relationships of the planctomycete division of the domain Bacteria based on amino acid sequences of elongation factor Tu
-
Jenkins, C. & Fuerst J. A. (2001). Phylogenetic analysis of evolutionary relationships of the planctomycete division of the domain Bacteria based on amino acid sequences of elongation factor Tu. J Mol Evol 52, 405-418.
-
(2001)
J Mol Evol
, vol.52
, pp. 405-418
-
-
Jenkins, C.1
Fuerst, J.A.2
-
16
-
-
0032953228
-
Comparative genomes of Chlamidia pneumoniae and C. trachomatis
-
Kalman, S., Mitchell, W., Maratha, R., Lammel, C., Fan, J,. Hyman, R. W., Olinger, L., Grimwood, J., Davis, R. W. & Stephens, R. S. (1999). Comparative genomes of Chlamidia pneumoniae and C. trachomatis. Nat Genet 21, 385-389.
-
(1999)
Nat Genet
, vol.21
, pp. 385-389
-
-
Kalman, S.1
Mitchell, W.2
Maratha, R.3
Lammel, C.4
Fan, J.5
Hyman, R.W.6
Olinger, L.7
Grimwood, J.8
Davis, R.W.9
Stephens, R.S.10
-
17
-
-
0021139615
-
Cell wall studies on budding bacteria of the Planctomyces/Pasteuria group and on a Prosthecomicrobium sp
-
Konig, E., Schlesner, H. & Hirsch, P. (1984). Cell wall studies on budding bacteria of the Planctomyces/Pasteuria group and on a Prosthecomicrobium sp. Arch Microbiol 138, 200-205.
-
(1984)
Arch Microbiol
, vol.138
, pp. 200-205
-
-
Konig, E.1
Schlesner, H.2
Hirsch, P.3
-
18
-
-
0037077154
-
-
Park J. S., Marr, M. T. & Roberts, J. W. (2002). E. coli transcription repair coupling factor (Mfd protein) rescues arrested complexes by promoting forward translocation. Cell 109, 757-767.
-
Park J. S., Marr, M. T. & Roberts, J. W. (2002). E. coli transcription repair coupling factor (Mfd protein) rescues arrested complexes by promoting forward translocation. Cell 109, 757-767.
-
-
-
-
19
-
-
0034654345
-
-
Read, T. D., Brunham, R. C., Shen, C., Gill, S. R., Heidelberg, J. F., White, O., Hickey, E. K., Peterson, J., Utterback T. & other authors (2000). Genome sequences of Chlamydia trachomatis MoPn and Chlamydia pneumoniae AR39. Nucleic Acids Res 28, 1397-1406.
-
Read, T. D., Brunham, R. C., Shen, C., Gill, S. R., Heidelberg, J. F., White, O., Hickey, E. K., Peterson, J., Utterback T. & other authors (2000). Genome sequences of Chlamydia trachomatis MoPn and Chlamydia pneumoniae AR39. Nucleic Acids Res 28, 1397-1406.
-
-
-
-
20
-
-
0038813931
-
-
Read, T. D., Myers, G. S. A., Brunham, R. C., Nelson, W. C., Paulsen, I. T., Heidelberg, J., Holtzapple, E., Khouri H., Federova, N. B. & other authors (2003). Genome sequence of Chlamydophila caviae (Chlamydia psittaci GPIC): examining the role of niche-specific genes in the evolution of the Chlamydiaceae. Nucleic Acids Res 31, 2134-2147.
-
Read, T. D., Myers, G. S. A., Brunham, R. C., Nelson, W. C., Paulsen, I. T., Heidelberg, J., Holtzapple, E., Khouri H., Federova, N. B. & other authors (2003). Genome sequence of Chlamydophila caviae (Chlamydia psittaci GPIC): examining the role of niche-specific genes in the evolution of the Chlamydiaceae. Nucleic Acids Res 31, 2134-2147.
-
-
-
-
21
-
-
0000417768
-
Chlamydia
-
Edited by P. R. Murray, E. J. Baron, M. A. Pfaller, F. C. Tenover & R. H. Yolken. Washington, DC: American Society for Microbiology
-
Schachter, J. & Stamm, W. E. (1999). Chlamydia. In Manual of Clinical Microbiology, pp. 795-806. Edited by P. R. Murray, E. J. Baron, M. A. Pfaller, F. C. Tenover & R. H. Yolken. Washington, DC: American Society for Microbiology.
-
(1999)
Manual of Clinical Microbiology
, pp. 795-806
-
-
Schachter, J.1
Stamm, W.E.2
-
22
-
-
34547912014
-
The phylum Verrucomicrobia: A phylogenetically heterogeneous bacterial group
-
Edited by M. Dworkin, S. Falkow, K. H. Schleifer & E. Stackebrandt. New York: Springer
-
Scheisner, H., Jenkins, C. & Staley, J. T. (2006). The phylum Verrucomicrobia: a phylogenetically heterogeneous bacterial group. In The Prokaryotes, pp. 881-896. Edited by M. Dworkin, S. Falkow, K. H. Schleifer & E. Stackebrandt. New York: Springer.
-
(2006)
The Prokaryotes
, pp. 881-896
-
-
Scheisner, H.1
Jenkins, C.2
Staley, J.T.3
-
23
-
-
0032561496
-
-
Stephens, R. S., Kalman, S., Lammel, C., Fan, J., Marathe, R., Aravind, L., Mitchell, W., Olinger, L., Tatusov, R. L. & other authors (1998). Genome sequence of an obligate intracellular pathogen of humans: Chlamydia trachomatis. Science 282, 754-759.
-
Stephens, R. S., Kalman, S., Lammel, C., Fan, J., Marathe, R., Aravind, L., Mitchell, W., Olinger, L., Tatusov, R. L. & other authors (1998). Genome sequence of an obligate intracellular pathogen of humans: Chlamydia trachomatis. Science 282, 754-759.
-
-
-
-
24
-
-
33645741019
-
Deciphering the evolution and metabolism of an anammox bacterium from a community genome
-
Strous, M., Pelletier, E., Mangenot, S., Rattei, T., Lehner, A., Taylor, M. W., Horn, M., Daims, H., Bartol-Mavel, D. & other authors (2006). Deciphering the evolution and metabolism of an anammox bacterium from a community genome. Nature 440, 790-794.
-
(2006)
Nature
, vol.440
, pp. 790-794
-
-
Strous, M.1
Pelletier, E.2
Mangenot, S.3
Rattei, T.4
Lehner, A.5
Taylor, M.W.6
Horn, M.7
Daims, H.8
Bartol-Mavel, D.9
-
25
-
-
2942668180
-
Evaluation of the phylogenetic position of the planctomycete 'Rhodopirellula baltica' SH 1 by means of concatenated ribosomal protein sequences, DNA-directed RNA polymerase subunit sequences and whole genome trees
-
Teeling, H., Lombardot, T., Bauer, M., Ludwig, W. & Glockner, F. O. (2004). Evaluation of the phylogenetic position of the planctomycete 'Rhodopirellula baltica' SH 1 by means of concatenated ribosomal protein sequences, DNA-directed RNA polymerase subunit sequences and whole genome trees. Int J Syst Evol Microbiol 54, 791-801.
-
(2004)
Int J Syst Evol Microbiol
, vol.54
, pp. 791-801
-
-
Teeling, H.1
Lombardot, T.2
Bauer, M.3
Ludwig, W.4
Glockner, F.O.5
-
26
-
-
33744927902
-
The Planctomycetes, Verrucomicrobia, Chlamydiae and sister phyla comprise a superphylum with biotechnological and medical relevance
-
Wagner, M. & Horn, M. (2006). The Planctomycetes, Verrucomicrobia, Chlamydiae and sister phyla comprise a superphylum with biotechnological and medical relevance. Curr Opin Biotechnol 17, 241-249.
-
(2006)
Curr Opin Biotechnol
, vol.17
, pp. 241-249
-
-
Wagner, M.1
Horn, M.2
-
27
-
-
0034526970
-
Comparative phylogenetic analyses of members of the order Planctomycetales and the division Verrucomicrobia: 23S rRNA gene sequence analysis supports the 16S rRNA gene sequence-derived phylogeny
-
Word, N. L., Rainey, F. A., Hedlund, B. P., Staley, J. T., Ludwig, W. & Stackebrandt, E. (2000). Comparative phylogenetic analyses of members of the order Planctomycetales and the division Verrucomicrobia: 23S rRNA gene sequence analysis supports the 16S rRNA gene sequence-derived phylogeny. Int J Syst Evol Microbiol 50, 1965-1972.
-
(2000)
Int J Syst Evol Microbiol
, vol.50
, pp. 1965-1972
-
-
Word, N.L.1
Rainey, F.A.2
Hedlund, B.P.3
Staley, J.T.4
Ludwig, W.5
Stackebrandt, E.6
-
28
-
-
34547864862
-
The order Planctomycetales, including the genera Planctomycetes, Pirellula, Gemmata, Isosphaera and the Candidatus genera Brocadia, Kuenenia and Scalindua
-
Edited by M. Dworkin, S. Falkow, K. H. Schleifer & E. Stackebrandt. New York. Springer
-
Ward, N., Staley, J. T., Fuerst, J. A., Giovannoni, S., Schlesner, H. & Stackebrandt, E. (2006). The order Planctomycetales, including the genera Planctomycetes, Pirellula, Gemmata, Isosphaera and the Candidatus genera Brocadia, Kuenenia and Scalindua. In The Prokaryotes, pp. 757-793. Edited by M. Dworkin, S. Falkow, K. H. Schleifer & E. Stackebrandt. New York. Springer.
-
(2006)
The Prokaryotes
, pp. 757-793
-
-
Ward, N.1
Staley, J.T.2
Fuerst, J.A.3
Giovannoni, S.4
Schlesner, H.5
Stackebrandt, E.6
|