Crystal structure of scaffolding protein CheW from thermoanaerobacter tengcongensis

Biochemical and Biophysical Research Communications

Volumn 361, Issue 4, 2007, Pages 1027-1032

  Yao, Wang ^a   Shi, Liang ^a   Liang, Dong Cai ^a  

^a INSTITUTE OF BIOPHYSICS   (China)

Author keywords

Binding; CheA; Crystal structure; Interaction; MCP; TtCheW

Indexed keywords

CHEW PROTEIN; SCAFFOLD PROTEIN;

ARTICLE; CONTROLLED STUDY; CRYSTAL STRUCTURE; GENE INTERACTION; GENE MUTATION; NONHUMAN; PRIORITY JOURNAL; PROTEIN EXPRESSION; PROTEIN PURIFICATION; THERMOANAEROBACTER; THERMOANAEROBACTER TENGCONGENSIS; THERMOTOGA MARITIMA;

BACTERIAL PROTEINS; BINDING SITES; CRYSTALLOGRAPHY, X-RAY; MEMBRANE PROTEINS; MODELS, MOLECULAR; STRUCTURAL HOMOLOGY, PROTEIN; THERMOANAEROBACTER;

THERMOANAEROBACTER TENGCONGENSIS; THERMOTOGA;

EID: 34547888054     PISSN: 0006291X     EISSN: 10902104     Source Type: Journal    
DOI: 10.1016/j.bbrc.2007.07.130     Document Type: Article

References (30)

1. Appleby J.L., Parkinson J.S., and Bourret R.B. Signal transduction via the multi-step phosphorelay: not necessarily a road less traveled. Cell 86 (1996) 845-848
2. Wadhams G.H., and Armitage J.P. Making sense of it all: bacterial chemotaxis. Nat. Rev. Mol. Cell Biol. 5 (2004) 1024-1037
3. Parkinson J.S., Ames P., and Studdert C.A. Collaborative signaling by bacterial chemoreceptors. Curr. Opin. Microbiol. 8 (2005) 116-121
4. Sourjik V. Receptor clustering and signal processing in E. coli chemotaxis. Trends Microbiol. 12 (2004) 569-576
5. Falke J.J., and Hazelbauer G.L. Transmembrane signaling in bacterial chemoreceptors. Trends Biochem. Sci. 26 (2001) 257-265
6. Sourjik V., and Berg H.C. Functional interactions between receptors in bacterial chemotaxis. Nature 428 (2004) 437-441
7. Sourjik V., and Berg H.C. Binding of the Escherichia coli response regulator CheY to its target measured in vivo by fluorescence resonance energy transfer. Proc. Natl. Acad. Sci. USA 99 (2002) 12669-12674
8. C.A. Studdert, J.S. Parkinson, Crosslinking snapshots of bacterial chemoreceptor squads, 2004, pp. 2117-2122.
9. Zhao J., and Parkinson J.S. Cysteine-scanning analysis of the chemoreceptor-coupling domain of the Escherichia coli chemotaxis signaling kinase CheA. J. Bacteriol. 188 (2006) 4321-4330
10. Liu J.D., and Parkinson J.S. Genetic evidence for interaction between the CheW and Tsr proteins during chemoreceptor signaling by Escherichia coli. J. Bacteriol. 173 (1991) 4941-4951
11. Gegner J.A., Graham D.R., Roth A.F., and Dahlquist F.W. Assembly of an MCP receptor, CheW, and kinase CheA complex in the bacterial chemotaxis signal transduction pathway. Cell 70 (1992) 975-982
12. Maddock J.R., and Shapiro L. Polar location of the chemoreceptor complex in the Escherichia coli cell. Science 259 (1993) 1717-1723
13. Martin A.C., Wadhams G.H., and Armitage J.P. The roles of the multiple CheW and CheA homologues in chemotaxis and in chemoreceptor localization in Rhodobacter sphaeroides. Mol. Microbiol. 40 (2001) 1261-1272
14. Bilwes A.M., Alex L.A., Crane B.R., and Simon M.I. Structure of CheA, a signal-transducing histidine kinase. Cell 96 (1999) 131-141
15. Griswold I.J., Zhou H., Matison M., Swanson R.V., McIntosh L.P., Simon M.I., and Dahlquist F.W. The solution structure and interactions of CheW from Thermotoga maritima. Nat. Struct. Biol. 9 (2002) 121-125
16. Park S.Y., Borbat P.P., Gonzalez-Bonet G., Bhatnagar J., Pollard A.M., Freed J.H., Bilwes A.M., and Crane B.R. Reconstruction of the chemotaxis receptor-kinase assembly. Nat. Struct. Mol. Biol. 13 (2006) 400-407
17. Bao Q., Tian Y., Li W., Xu Z., Xuan Z., Hu S., Dong W., Yang J., Chen Y., Xue Y., Xu Y., Lai X., Huang L., Dong X., Ma Y., Ling L., Tan H., Chen R., Wang J., Yu J., and Yang H. A complete sequence of the T. tengcongensis genome. Genome Res 12 (2002) 689-700
18. Otwinowski Z. Oscilation data reduction program. In: Sawyer L., Isaacs N., and Bailey S. (Eds). CCP4 Study Weekend: Data Collection and Processing (1993), Daresbury Laboratory, Warrington, UK 56-62
19. McCoy A.J., Grosse-Kunstleve R.W., Storoni L.C., and Read R.J. Likelihood-enhanced fast translation functions. Acta Crystallogr. D Biol. Crystallogr. 61 (2005) 458-464
20. Terwilliger T.C. Maximum-likelihood density modification. Acta Crystallogr. D Biol. Crystallogr. 56 (2000) 965-972
21. Terwilliger T.C. Using prime-and-switch phasing to reduce model bias in molecular replacement. Acta Crystallogr. D Biol. Crystallogr. 60 (2004) 2144-2149
22. Yao D.Q., Huang S., Wang J.W., Gu Y.X., Zheng C.D., Fan H.F., Watanabe N., and Tanaka I. SAD phasing by OASIS-2004: case studies of dual-space fragment extension. Acta Crystallogr. D Biol. Crystallogr. 62 (2006) 883-890
23. Perrakis A., Morris R., and Lamzin V.S. Automated protein model building combined with iterative structure refinement. Nat. Struct. Biol. 6 (1999) 458-463
24. Brunger A.T., Adams P.D., Clore G.M., DeLano W.L., Gros P., Grosse-Kunstleve R.W., Jiang J.S., Kuszewski J., Nilges M., Pannu N.S., Read R.J., Rice L.M., Simonson T., and Warren G.L. Crystallography & NMR system: a new software suite for macromolecular structure determination. Acta Crystallogr. D Biol. Crystallogr. 54 (1998) 905-921
25. Emsley P., and Cowtan K. Coot: model-building tools for molecular graphics. Acta Crystallogr. D Biol. Crystallogr. 60 (2004) 2126-2132
26. Krissinel E., and Henrick K. Secondary-structure matching (SSM), a new tool for fast protein structure alignment in three dimensions. Acta Crystallogr. D Biol. Crystallogr. 60 (2004) 2256-2268
27. Holm L., and Sander C. Dali/FSSP classification of three-dimensional protein folds. Nucleic Acids Res. 25 (1997) 231-234
28. Wallace A.C., Laskowski R.A., and Thornton J.M. LIGPLOT: a program to generate schematic diagrams of protein-ligand interactions. Protein Eng. 8 (1995) 127-134
29. Boukhvalova M., VanBruggen R., and Stewart R.C. CheA kinase and chemoreceptor interaction surfaces on CheW. J. Biol. Chem. 277 (2002) 23596-23603
30. Bradford J.R., and Westhead D.R. Improved prediction of protein-protein binding sites using a support vector machines approach. Bioinformatics 21 (2005) 1487-1494