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Volumn 23, Issue 13, 2007, Pages

Learning to extract relations for protein annotation

Author keywords

[No Author keywords available]

Indexed keywords

CLASSIFICATION ALGORITHM; CODING AND CLASSIFICATION; COMPUTER PROGRAM; CONFERENCE PAPER; DATA ANALYSIS; DATA EXTRACTION; LEARNING; MACHINE LEARNING; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN DATABASE; PROTEIN FUNCTION; PROTEIN STRUCTURE; PROTEOMICS;

EID: 34547840247     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/btm168     Document Type: Conference Paper
Times cited : (11)

References (21)
  • 1
    • 0037248869 scopus 로고    scopus 로고
    • Prints and its automatic supplement, preprints
    • Attwood, T.K., et al. (2003) Prints and its automatic supplement, preprints. Nucleic Acids Res., 31, 400-402.
    • (2003) Nucleic Acids Res , vol.31 , pp. 400-402
    • Attwood, T.K.1
  • 2
    • 2342598419 scopus 로고    scopus 로고
    • Bottom-up relational learning of pattern matching rules for information extraction
    • Califf, M.E. and Mooney, R.J. (2003) Bottom-up relational learning of pattern matching rules for information extraction. J. Mach. Learn. Res., 4, 177-210.
    • (2003) J. Mach. Learn. Res , vol.4 , pp. 177-210
    • Califf, M.E.1    Mooney, R.J.2
  • 3
    • 10244272212 scopus 로고    scopus 로고
    • Automatic template creation for information extraction, an overview
    • Technical report, University of Sheffield
    • Collier, R. (1996) Automatic template creation for information extraction, an overview, Technical report, University of Sheffield.
    • (1996)
    • Collier, R.1
  • 4
    • 0043245787 scopus 로고    scopus 로고
    • The automatic discovery of structural principles describing protein fold space
    • Cootes, A. et al. (2003) The automatic discovery of structural principles describing protein fold space. J Mol. Biol, 330, 839-850.
    • (2003) J Mol. Biol , vol.330 , pp. 839-850
    • Cootes, A.1
  • 6
    • 2342435295 scopus 로고    scopus 로고
    • Mapping gene ontology to proteins based on protein-protein interaction data
    • Deng, M., et al. (2004) Mapping gene ontology to proteins based on protein-protein interaction data. Bioinformatics, 20, 895-902.
    • (2004) Bioinformatics , vol.20 , pp. 895-902
    • Deng, M.1
  • 7
    • 0033907729 scopus 로고    scopus 로고
    • Machine learning for information extraction in informal domains
    • Freitag, D. (2000) Machine learning for information extraction in informal domains. Mach. Learn., 39, 169-202.
    • (2000) Mach. Learn , vol.39 , pp. 169-202
    • Freitag, D.1
  • 8
    • 0037250015 scopus 로고    scopus 로고
    • Protein structures and information extraction from biological texts: The pasta system
    • Gaizauskas, R.J., et al. (2003) Protein structures and information extraction from biological texts: The pasta system. Bioinformatics 19, 135-143.
    • (2003) Bioinformatics , vol.19 , pp. 135-143
    • Gaizauskas, R.J.1
  • 9
    • 85118960253 scopus 로고    scopus 로고
    • Discovering relations among named entities from large corpora
    • Hasegawa, T., et al. (2004) Discovering relations among named entities from large corpora. In ACL, pp. 415-422.
    • (2004) ACL , pp. 415-422
    • Hasegawa, T.1
  • 10
    • 20744446607 scopus 로고    scopus 로고
    • Literature mining and database annotation of protein phosphorylation using a rule-based system
    • Hu, Z.-Z., et al. (2005) Literature mining and database annotation of protein phosphorylation using a rule-based system. Bioinformatics 21, 2759-2765.
    • (2005) Bioinformatics , vol.21 , pp. 2759-2765
    • Hu, Z.-Z.1
  • 11
    • 0034040680 scopus 로고    scopus 로고
    • An ontology for biological function based on molecular interactions
    • Karp, P.D. (2000) An ontology for biological function based on molecular interactions. Bioinformatics, 16, 269-285.
    • (2000) Bioinformatics , vol.16 , pp. 269-285
    • Karp, P.D.1
  • 12
    • 4944229711 scopus 로고    scopus 로고
    • Genia corpus - a semantically annotated corpus for bio-textmining
    • Kim, J.-D., et al. (2003) Genia corpus - a semantically annotated corpus for bio-textmining. In ISMB (Supplement of Bioinformatics), pp. 180-182.
    • (2003) ISMB (Supplement of Bioinformatics) , pp. 180-182
    • Kim, J.-D.1
  • 13
    • 84925740795 scopus 로고    scopus 로고
    • Subgroup discovery with cn2-sd
    • Lavrac, N., et al. (2004) Subgroup discovery with cn2-sd. J. Mach. Learn. Res., 5, 153-188.
    • (2004) J. Mach. Learn. Res , vol.5 , pp. 153-188
    • Lavrac, N.1
  • 14
    • 26444542527 scopus 로고    scopus 로고
    • Modelling metabolic pathways using stochastic logic programs-based ensemble methods
    • Lodhi, H. and Muggleton, S. (2004) Modelling metabolic pathways using stochastic logic programs-based ensemble methods. In CMSB, pp. 119-133.
    • (2004) CMSB , pp. 119-133
    • Lodhi, H.1    Muggleton, S.2
  • 15
    • 27944477366 scopus 로고    scopus 로고
    • METIS: Multiple extraction techniques for informative sentences
    • Mitchell, A.L., et al. (2005) METIS: Multiple extraction techniques for informative sentences. Bioinformatics, 21, 4196-4197.
    • (2005) Bioinformatics , vol.21 , pp. 4196-4197
    • Mitchell, A.L.1
  • 16
    • 0028429573 scopus 로고
    • Inductive logic programming: Theory and methods
    • Muggleton, S. and Raedt, L.D. (1994) Inductive logic programming: Theory and methods. J. Logic Programming, 19, 629-679.
    • (1994) J. Logic Programming , vol.19 , pp. 629-679
    • Muggleton, S.1    Raedt, L.D.2
  • 17
    • 34547846921 scopus 로고    scopus 로고
    • Sentence filtering for information extraction in genomics, a classication problem
    • Nedellec, C. et al. (2001) Sentence filtering for information extraction in genomics, a classication problem. In PKDD, pp. 326-337.
    • (2001) PKDD , pp. 326-337
    • Nedellec, C.1
  • 19
    • 33645104154 scopus 로고    scopus 로고
    • Extraction of regulatory gene/protein networks from Medline
    • Saric, J., et al. (2006) Extraction of regulatory gene/protein networks from Medline. Bioinformatics, 22, 645-650.
    • (2006) Bioinformatics , vol.22 , pp. 645-650
    • Saric, J.1
  • 20
    • 0032624184 scopus 로고    scopus 로고
    • Learning information extraction rules for semi-structured and free text
    • Soderland, S. (1999) Learning information extraction rules for semi-structured and free text. Mach. Learn., 34, 233-272.
    • (1999) Mach. Learn , vol.34 , pp. 233-272
    • Soderland, S.1
  • 21
    • 2542454374 scopus 로고    scopus 로고
    • The Aleph manual
    • Technical report, Computing Laboratory, Oxford University
    • Srinivasan, A. (2000) The Aleph manual. Technical report, Computing Laboratory, Oxford University.
    • (2000)
    • Srinivasan, A.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.