-
1
-
-
1842454814
-
Organization of lin genes and IS6100 among different strains of hexachlorocyclohexane-degrading Sphingomonas paucimobilis: Evidence for horizontal gene transfer
-
Dogra, C., Raina, V., Pal, R., Suar, M., Lal, S., Gartemann, K.H., et al. (2004) Organization of lin genes and IS6100 among different strains of hexachlorocyclohexane-degrading Sphingomonas paucimobilis: evidence for horizontal gene transfer. J Bacteriol 186 : 2225 2235.
-
(2004)
J Bacteriol
, vol.186
, pp. 2225-2235
-
-
Dogra, C.1
Raina, V.2
Pal, R.3
Suar, M.4
Lal, S.5
Gartemann, K.H.6
-
2
-
-
13244265506
-
Identification and characterization of genes involved in the downstream degradation pathway of γ-hexachlorocyclohexane in Sphingomonas paucimobilis UT26
-
Endo, R., Kamakura, M., Miyauchi, K., Fukuda, M., Ohtsubo, Y., Tsuda, M. Nagata, Y. (2005) Identification and characterization of genes involved in the downstream degradation pathway of γ-hexachlorocyclohexane in Sphingomonas paucimobilis UT26. J Bacteriol 187 : 847 853.
-
(2005)
J Bacteriol
, vol.187
, pp. 847-853
-
-
Endo, R.1
Kamakura, M.2
Miyauchi, K.3
Fukuda, M.4
Ohtsubo, Y.5
Tsuda, M.6
Nagata, Y.7
-
3
-
-
0034005123
-
Genetic Analysis of Functions Involved in Adhesion of Pseudomonas putida to Seeds
-
Espinosa-Urgel, M., Salido, A. Ramos, J.L. (2000) Genetic Analysis of Functions Involved in Adhesion of Pseudomonas putida to Seeds. J Bacteriol 182 : 2363 2369.
-
(2000)
J Bacteriol
, vol.182
, pp. 2363-2369
-
-
Espinosa-Urgel, M.1
Salido, A.2
Ramos, J.L.3
-
4
-
-
0032575051
-
A broad-host-range Flp-FRT recombination system for site-specific excision of chromosomally-located DNA sequences: Application for isolation of unmarked Pseudomonas aeruginosa mutants
-
Hoang, T.T., Karkhoff-Schweizer, R.R., Kutchma, A.J. Schweizer, H.P. (1998) A broad-host-range Flp-FRT recombination system for site-specific excision of chromosomally-located DNA sequences: application for isolation of unmarked Pseudomonas aeruginosa mutants. Gene 212 : 77 86.
-
(1998)
Gene
, vol.212
, pp. 77-86
-
-
Hoang, T.T.1
Karkhoff-Schweizer, R.R.2
Kutchma, A.J.3
Schweizer, H.P.4
-
5
-
-
0000396578
-
Dehydrochlorination of γ-hexachlorocyclohexane (γ-BHC) by γ-BHC-assimilating Pseudomonas paucimobilis
-
Imai, R., Nagata, Y., Senoo, K., Wada, H., Fukuda, M., Takagi, M. Yano, K. (1989) Dehydrochlorination of γ-hexachlorocyclohexane (γ-BHC) by γ-BHC-assimilating Pseudomonas paucimobilis. Agric Biol Chem 53 : 2015 2017.
-
(1989)
Agric Biol Chem
, vol.53
, pp. 2015-2017
-
-
Imai, R.1
Nagata, Y.2
Senoo, K.3
Wada, H.4
Fukuda, M.5
Takagi, M.6
Yano, K.7
-
6
-
-
0025786069
-
Molecular cloning of a Pseudomonas paucimobilis gene encoding a 17-kilodalton polypeptide that eliminates HCl molecules from γ-hexachlorocyclohexane
-
Imai, R., Nagata, Y., Fukuda, M., Takagi, M. Yano, K. (1991) Molecular cloning of a Pseudomonas paucimobilis gene encoding a 17-kilodalton polypeptide that eliminates HCl molecules from γ-hexachlorocyclohexane. J Bacteriol 173 : 6811 6819.
-
(1991)
J Bacteriol
, vol.173
, pp. 6811-6819
-
-
Imai, R.1
Nagata, Y.2
Fukuda, M.3
Takagi, M.4
Yano, K.5
-
7
-
-
0030453939
-
Genetic manipulations of microorganisms for the degradation of hexachlorocyclohexane
-
Johri, A.K., Dua, M., Tuteja, D., Saxena, R., Saxena, D.M. Lal, R. (1996) Genetic manipulations of microorganisms for the degradation of hexachlorocyclohexane. FEMS Microbiol Rev 19 : 69 84.
-
(1996)
FEMS Microbiol Rev
, vol.19
, pp. 69-84
-
-
Johri, A.K.1
Dua, M.2
Tuteja, D.3
Saxena, R.4
Saxena, D.M.5
Lal, R.6
-
8
-
-
0028793123
-
Four new derivatives of the broad-host-range cloning vector pBBR1MCS, carrying different antibiotic-resistance cassettes
-
Kovach, M.E., Elzer, P.H., Hill, D.S., Robertson, G.T., Farris, M.A., Roop, R.M.I.I. Peterson, K.M. (1995) Four new derivatives of the broad-host-range cloning vector pBBR1MCS, carrying different antibiotic-resistance cassettes. Gene 166 : 175 176.
-
(1995)
Gene
, vol.166
, pp. 175-176
-
-
Kovach, M.E.1
Elzer, P.H.2
Hill, D.S.3
Robertson, G.T.4
Farris, M.A.5
Roop, R.M.I.I.6
Peterson, K.M.7
-
9
-
-
0036952382
-
Cloning and characterization of lin genes responsible for the degradation of hexachlorocyclohexane isomers by Sphingomonas paucimobilis strain B90
-
Kumari, R., Subudhi, S., Suar, M., Dhingra, G., Raina, V., Dogra, C., et al. (2002) Cloning and characterization of lin genes responsible for the degradation of hexachlorocyclohexane isomers by Sphingomonas paucimobilis strain B90. Appl Environ Microbiol 68 : 6021 6028.
-
(2002)
Appl Environ Microbiol
, vol.68
, pp. 6021-6028
-
-
Kumari, R.1
Subudhi, S.2
Suar, M.3
Dhingra, G.4
Raina, V.5
Dogra, C.6
-
10
-
-
33644545035
-
Diversity, distribution and divergence of lin genes in hexachlorocyclohexane-degrading sphingomonads
-
Lal, R., Dogra, C., Malhotra, S., Sharma, P. Pal, R. (2006) Diversity, distribution and divergence of lin genes in hexachlorocyclohexane-degrading sphingomonads. Trends Biotechnol 24 : 121 130.
-
(2006)
Trends Biotechnol
, vol.24
, pp. 121-130
-
-
Lal, R.1
Dogra, C.2
Malhotra, S.3
Sharma, P.4
Pal, R.5
-
11
-
-
13744254809
-
Intrinsic and stimulated in situ biodegradation of hexachlorocyclohexane (HCH)
-
Langenhoff, A.A.M., Staps, J.J.M., Pijls, C.G.J.M., Alphenaar, A., Zwiep, G. Rijnaarts, H.H.M. (2002) Intrinsic and stimulated in situ biodegradation of hexachlorocyclohexane (HCH). Water Air Soil Pollut Focus 2 : 171-C181.
-
(2002)
Water Air Soil Pollut Focus
, vol.2
-
-
Langenhoff, A.A.M.1
Staps, J.J.M.2
Pijls, C.G.J.M.3
Alphenaar, A.4
Zwiep, G.5
Rijnaarts, H.H.M.6
-
12
-
-
33845789842
-
Isolation and characterization of a HCH degradation Sphingomonas sp. strain BHC-A
-
Ma, A.-Z., Wu, J., Zhang, G.-S., Wang, T. Li, S.-P. (2005) Isolation and characterization of a HCH degradation Sphingomonas sp. strain BHC-A. Acta Microbiologica Sinica 45 : 728 732.
-
(2005)
Acta Microbiologica Sinica
, vol.45
, pp. 728-732
-
-
Ma, A.-Z.1
Wu, J.2
Zhang, G.-S.3
Wang, T.4
Li, S.-P.5
-
13
-
-
0004136246
-
-
Cold Spring Harbor, NY, USA: Cold Spring Harbor Laboratory Press.
-
Maniatis, T., Fritsch, E.F. Sambrook, J. (1982) Molecular Cloning: A Laboratory Manual, 2nd edn. Cold Spring Harbor, NY, USA : Cold Spring Harbor Laboratory Press.
-
(1982)
Molecular Cloning: A Laboratory Manual, 2nd Edn.
-
-
Maniatis, T.1
Fritsch, E.F.2
Sambrook, J.3
-
14
-
-
0024284028
-
A simple salting out procedure for extracting DNA from human nucleated cells
-
Miller, S.A., Dykes, D.D. Polesky. H.F. (1988) A simple salting out procedure for extracting DNA from human nucleated cells. Nucleic Acids Res 16 : 1215.
-
(1988)
Nucleic Acids Res
, vol.16
, pp. 1215
-
-
Miller, S.A.1
Dykes, D.D.2
Polesky., H.F.3
-
15
-
-
0031895255
-
Cloning and sequencing of a 2,5-dichlorohydroquinone reductive dehalogenase gene which is involved in the degradation of γ- hexachlorocyclohexane in Sphingomonas paucimobilis
-
Miyauchi, K., Suh, S., Nagata, Y. Takagi, M. (1998) Cloning and sequencing of a 2,5-dichlorohydroquinone reductive dehalogenase gene which is involved in the degradation of γ-hexachlorocyclohexane in Sphingomonas paucimobilis. J Bacteriol 180 : 1354 1359.
-
(1998)
J Bacteriol
, vol.180
, pp. 1354-1359
-
-
Miyauchi, K.1
Suh, S.2
Nagata, Y.3
Takagi, M.4
-
16
-
-
0032704711
-
Cloning and sequencing of a novel meta-cleavage dioxygenase gene whose product is involved in degradation of γ-hexachlorocyclohexane in Sphingomonas paucimobilis
-
Miyauchi, K., Adachi, Y., Nagata, Y. Takagi, M. (1999) Cloning and sequencing of a novel meta-cleavage dioxygenase gene whose product is involved in degradation of γ-hexachlorocyclohexane in Sphingomonas paucimobilis. J Bacteriol 181 : 6712 6719.
-
(1999)
J Bacteriol
, vol.181
, pp. 6712-6719
-
-
Miyauchi, K.1
Adachi, Y.2
Nagata, Y.3
Takagi, M.4
-
17
-
-
33644960166
-
Distribution and phylogeny of hexachlorocyclohexane-degrading bacteria in soils from Spain
-
Mohn, W.W., Mertens, B., Neufeld, J.D., Verstraete, W. de Lorenzo, V. (2006a) Distribution and phylogeny of hexachlorocyclohexane-degrading bacteria in soils from Spain. Environ Microbiol 8 : 60 68.
-
(2006)
Environ Microbiol
, vol.8
, pp. 60-68
-
-
Mohn, W.W.1
Mertens, B.2
Neufeld, J.D.3
Verstraete, W.4
De Lorenzo, V.5
-
18
-
-
33644956913
-
Surveying biotransformations with a la carte genetic traps: Translating dehydrochlorination of lindane (gamma-hexachlorocyclohexane) into lacZ-based phenotypes
-
Mohn, W.W., Garmendia, J., Galvao, T.C. de Lorenzo, V. (2006b) Surveying biotransformations with a la carte genetic traps: translating dehydrochlorination of lindane (gamma-hexachlorocyclohexane) into lacZ-based phenotypes. Environ Microbiol 8 : 546 555.
-
(2006)
Environ Microbiol
, vol.8
, pp. 546-555
-
-
Mohn, W.W.1
Garmendia, J.2
Galvao, T.C.3
De Lorenzo, V.4
-
19
-
-
0027160384
-
Aerobic mineralization of γ-HCH by Pseudomonas paucimobilis UT26
-
Nagasawa. S., Kikuchi, R., Nagata, Y., Takagi, M. Matsuo, M. (1993a) Aerobic mineralization of γ-HCH by Pseudomonas paucimobilis UT26. Chemosphere 26 : 1719 1728.
-
(1993)
Chemosphere
, vol.26
, pp. 1719-1728
-
-
Nagasawa., S.1
Kikuchi, R.2
Nagata, Y.3
Takagi, M.4
Matsuo, M.5
-
20
-
-
0027328886
-
Indirect identification of an unstable intermediate in γ-HCH degradation by Pseudomonas paucimobilis UT26
-
Nagasawa, S., Kikuchi, R. Matsuo, M. (1993b) Indirect identification of an unstable intermediate in γ-HCH degradation by Pseudomonas paucimobilis UT26. Chemosphere 26 : 2279 2288.
-
(1993)
Chemosphere
, vol.26
, pp. 2279-2288
-
-
Nagasawa, S.1
Kikuchi, R.2
Matsuo, M.3
-
21
-
-
0027408819
-
Stereochemical analysis of γ-HCH degradation by Pseudomonas paucimobilis UT26
-
Nagasawa, S., Kikuchi, R., Nagata, Y., Takagi, M. Matsuo, M. (1993c) Stereochemical analysis of γ-HCH degradation by Pseudomonas paucimobilis UT26. Chemosphere 26 : 1187 1201.
-
(1993)
Chemosphere
, vol.26
, pp. 1187-1201
-
-
Nagasawa, S.1
Kikuchi, R.2
Nagata, Y.3
Takagi, M.4
Matsuo, M.5
-
22
-
-
84871380178
-
Purification and characterization of γ-hexachlorocyclohexane (γ-HCH) dehydrochlorinase (LinA) from Pseudomonas paucimobilis
-
Nagata, Y., Hatta, T., Imai, R., Kimbara, K., Fukuda, M., Yano, K. Takagi, M. (1993a) Purification and characterization of γ- hexachlorocyclohexane (γ-HCH) dehydrochlorinase (LinA) from Pseudomonas paucimobilis. Biosci Biotechnol Biochem 57 : 1582 1583.
-
(1993)
Biosci Biotechnol Biochem
, vol.57
, pp. 1582-1583
-
-
Nagata, Y.1
Hatta, T.2
Imai, R.3
Kimbara, K.4
Fukuda, M.5
Yano, K.6
Takagi, M.7
-
23
-
-
0027436421
-
Cloning and sequencing of a dehalogenase gene encoding an enzyme with hydrolase activity involved in the degradation of γ-hexachlorocyclohexane in Pseudomonas paucimobilis
-
Nagata, Y., Nariya, T., Ohtomo, R., Fukuda, M., Yano, K. Takagi, M. (1993b) Cloning and sequencing of a dehalogenase gene encoding an enzyme with hydrolase activity involved in the degradation of γ-hexachlorocyclohexane in Pseudomonas paucimobilis. J Bacteriol 175 : 6403 6410.
-
(1993)
J Bacteriol
, vol.175
, pp. 6403-6410
-
-
Nagata, Y.1
Nariya, T.2
Ohtomo, R.3
Fukuda, M.4
Yano, K.5
Takagi, M.6
-
24
-
-
0028276471
-
Cloning and sequencing of a 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase gene involved in the degradation of γ-hexachlorocyclohexane in Pseudomonas paucimobilis
-
Nagata, Y., Ohtomo, R., Miyauchi, K., Fukuda, M., Yano, K. Takagi, M. (1994) Cloning and sequencing of a 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase gene involved in the degradation of γ-hexachlorocyclohexane in Pseudomonas paucimobilis. J Bacteriol 176 : 3117 3125.
-
(1994)
J Bacteriol
, vol.176
, pp. 3117-3125
-
-
Nagata, Y.1
Ohtomo, R.2
Miyauchi, K.3
Fukuda, M.4
Yano, K.5
Takagi, M.6
-
25
-
-
0033387054
-
Complete analysis of genes and enzymes for γ-hexachlorocyclohexane degradation in Sphingomonas paucimobilis UT26
-
Nagata, Y., Miyauchi, K. Takagi, M. (1999a) Complete analysis of genes and enzymes for γ-hexachlorocyclohexane degradation in Sphingomonas paucimobilis UT26. J Ind Microbiol Biotechnol 23 : 380 390.
-
(1999)
J Ind Microbiol Biotechnol
, vol.23
, pp. 380-390
-
-
Nagata, Y.1
Miyauchi, K.2
Takagi, M.3
-
26
-
-
0032835982
-
Two different types of dehalogenases, LinA and LinB, involved in γ-hexachlorocyclohexane degradation in Sphingomonas paucimobilis UT26 are localized in the periplasmic space without molecular processing
-
Nagata, Y., Futamura, A., Miyauchi, K. Takagi, M. (1999b) Two different types of dehalogenases, LinA and LinB, involved in γ-hexachlorocyclohexane degradation in Sphingomonas paucimobilis UT26 are localized in the periplasmic space without molecular processing. J Bacteriol 181 : 5409 5413.
-
(1999)
J Bacteriol
, vol.181
, pp. 5409-5413
-
-
Nagata, Y.1
Futamura, A.2
Miyauchi, K.3
Takagi, M.4
-
27
-
-
17444418325
-
Degradation of β-hexachlorocyclohexane by haloalkane dehalogenase LinB from Sphingomonas paucimobilis UT26
-
Nagata, Y., Prokop, Z., Sato, Y., Jerabek, P., Kumar, A., Ohtsubo, Y., et al. (2005) Degradation of β-hexachlorocyclohexane by haloalkane dehalogenase LinB from Sphingomonas paucimobilis UT26. Appl Environ Microbiol 71 : 2183 2185.
-
(2005)
Appl Environ Microbiol
, vol.71
, pp. 2183-2185
-
-
Nagata, Y.1
Prokop, Z.2
Sato, Y.3
Jerabek, P.4
Kumar, A.5
Ohtsubo, Y.6
-
28
-
-
33748799126
-
Haloalkane dehalogenase LinB is responsible for beta- and delta-hexachlorocyclohexane transformation in Sphingobium indicum B90A
-
Sharma, P., Raina, V., Kumari, R., Malhotra, S., Dogra, C., Kumari, H., et al. (2006) Haloalkane dehalogenase LinB is responsible for beta- and delta-hexachlorocyclohexane transformation in Sphingobium indicum B90A. Appl Environ Microbiol 72 : 5720 5727.
-
(2006)
Appl Environ Microbiol
, vol.72
, pp. 5720-5727
-
-
Sharma, P.1
Raina, V.2
Kumari, R.3
Malhotra, S.4
Dogra, C.5
Kumari, H.6
-
29
-
-
8744228122
-
Dynamics of multiple lin gene expression in Sphingomonas paucimobilis B90A in response to different hexachlorocyclohexane isomers
-
Suar, M., van der Meer, J.R., Lawlor, K., Holliger, C. Lal, R. (2004) Dynamics of multiple lin gene expression in Sphingomonas paucimobilis B90A in response to different hexachlorocyclohexane isomers. Appl Environ Microbiol 70 : 6650 6656.
-
(2004)
Appl Environ Microbiol
, vol.70
, pp. 6650-6656
-
-
Suar, M.1
Van Der Meer, J.R.2
Lawlor, K.3
Holliger, C.4
Lal, R.5
-
30
-
-
29144498384
-
Enantioselective transformation of alpha-hexachlorocyclohexane by the dehydrochlorinases LinA1 and LinA2 from the soil bacterium Sphingomonas paucimobilis B90A
-
Suar, M., Hauser, A., Poiger, T., Buser, H.R., Muller, M.D., Dogra, C., et al. (2005) Enantioselective transformation of alpha-hexachlorocyclohexane by the dehydrochlorinases LinA1 and LinA2 from the soil bacterium Sphingomonas paucimobilis B90A. Appl Environ Microbiol 71 : 8514 8518.
-
(2005)
Appl Environ Microbiol
, vol.71
, pp. 8514-8518
-
-
Suar, M.1
Hauser, A.2
Poiger, T.3
Buser, H.R.4
Muller, M.D.5
Dogra, C.6
-
31
-
-
0035896524
-
Reaction mechanism and stereochemistry of γ-hexachlorocyclohexane dehydrochlorinase LinA
-
Trantirek, L., Hynkova, K., Nagata, Y., Murzin, A., Ansorgova, A., Sklenar, V. Damborsky, J. (2001) Reaction mechanism and stereochemistry of γ-hexachlorocyclohexane dehydrochlorinase LinA. J Biol Chem 276 : 7734 7740.
-
(2001)
J Biol Chem
, vol.276
, pp. 7734-7740
-
-
Trantirek, L.1
Hynkova, K.2
Nagata, Y.3
Murzin, A.4
Ansorgova, A.5
Sklenar, V.6
Damborsky, J.7
-
32
-
-
33845753491
-
A gene linB2 responsible for the conversion of β-HCH and 2,3,4,5,6-pentachlorocyclohexanol in Sphingomonas sp. BHC-A
-
Wu, J., Hong, Q., Han, P., He, J. Li, S. (2007) A gene linB2 responsible for the conversion of β-HCH and 2,3,4,5,6-pentachlorocyclohexanol in Sphingomonas sp. BHC-A. Appl Microbiol Biotechnol 73 : 1097 1105.
-
(2007)
Appl Microbiol Biotechnol
, vol.73
, pp. 1097-1105
-
-
Wu, J.1
Hong, Q.2
Han, P.3
He, J.4
Li, S.5
|