-
1
-
-
0030801002
-
Gapped blast and psi-blast: A new generation of protein database search programs
-
Altschul, SF, Madden, TL, Schaffer, AA, Zhang, J, Zhang, Z, Miller, W, Lipman, DJ (1997) Gapped blast and psi-blast: a new generation of protein database search programs. Nucleic Acids Res 25: 3389-3402
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
2
-
-
0028946084
-
Phylogenetic identification and in situ detection of individual microbial cells without cultivation
-
Amann, RI, Ludwig, W, Schleifer, K (1995) Phylogenetic identification and in situ detection of individual microbial cells without cultivation. Microbiol Rev 59: 143-169
-
(1995)
Microbiol Rev
, vol.59
, pp. 143-169
-
-
Amann, R.I.1
Ludwig, W.2
Schleifer, K.3
-
3
-
-
29144504177
-
At least 1 in 20 16s rRNA sequence records currently held in public repositories is estimated to contain substantial anomalies
-
Ashelford, K, Chuzhanova, N, Fry, J, Jones, A, Weightman, A (2005) At least 1 in 20 16s rRNA sequence records currently held in public repositories is estimated to contain substantial anomalies. Appl Environ Microbiol 71: 7724-7736
-
(2005)
Appl Environ Microbiol
, vol.71
, pp. 7724-7736
-
-
Ashelford, K.1
Chuzhanova, N.2
Fry, J.3
Jones, A.4
Weightman, A.5
-
4
-
-
13444304389
-
GenBank
-
Benson, DA, Karsch-Mizrachi, I, Lipman, DJ, Ostell, J, Wheeler, DL (2005) GenBank. Nucleic Acids Res 33: D34-D38
-
(2005)
Nucleic Acids Res
, vol.33
-
-
Benson, D.A.1
Karsch-Mizrachi, I.2
Lipman, D.J.3
Ostell, J.4
Wheeler, D.L.5
-
5
-
-
0038812360
-
Induction of nitrate and nitrite metabolism in bovine rumen fluid and the transfer of this capacity to untreated animals
-
Cheng, KJ, Phillippe, RC, Kozub, GC, Majak, W, Costerton, JW (1985) Induction of nitrate and nitrite metabolism in bovine rumen fluid and the transfer of this capacity to untreated animals. Can J Anim Sci 65: 647-652
-
(1985)
Can J Anim Sci
, vol.65
, pp. 647-652
-
-
Cheng, K.J.1
Phillippe, R.C.2
Kozub, G.C.3
Majak, W.4
Costerton, J.W.5
-
6
-
-
0037251969
-
The ribosomal database project (RDP-II): Previewing a new autoaligner that allows regular updates and the new prokaryotic taxonomy
-
Cole, J, Chai, B, Marsh, T, Farris, R, Wang, Q, Kulam, S, Chandra, S, McGarrell, D, Schmidt, T, Garrity, G, Tiedje, J (2003) The ribosomal database project (RDP-II): previewing a new autoaligner that allows regular updates and the new prokaryotic taxonomy. Nucleic Acids Res 31: 442-443
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 442-443
-
-
Cole, J.1
Chai, B.2
Marsh, T.3
Farris, R.4
Wang, Q.5
Kulam, S.6
Chandra, S.7
McGarrell, D.8
Schmidt, T.9
Garrity, G.10
Tiedje, J.11
-
7
-
-
0343231850
-
Resistance of sheep to pyrrolizidine alkaloids
-
Craig, AM, Blythe, LL, Lassen, ED, Slizeski, ML (1986) Resistance of sheep to pyrrolizidine alkaloids. Isr J Vet Med 42: 376-384
-
(1986)
Isr J Vet Med
, vol.42
, pp. 376-384
-
-
Craig, A.M.1
Blythe, L.L.2
Lassen, E.D.3
Slizeski, M.L.4
-
8
-
-
0026268009
-
Serum liver enzyme and histopathologic changes in calves with chronic and chronic-delayed Senecio jacobaea toxicosis
-
Craig, AM, Pearson, EG, Meyer, C, Schmitz, JA (1991) Serum liver enzyme and histopathologic changes in calves with chronic and chronic-delayed Senecio jacobaea toxicosis. Am J Vet Res 52: 1969-1978
-
(1991)
Am J Vet Res
, vol.52
, pp. 1969-1978
-
-
Craig, A.M.1
Pearson, E.G.2
Meyer, C.3
Schmitz, J.A.4
-
9
-
-
0019204930
-
Characteristics of anaerobic oxalate degrading enrichment cultures from the rumen
-
Dawson, KA, Allison, MJ, Hartman, PA (1980) Characteristics of anaerobic oxalate degrading enrichment cultures from the rumen. Appl Environ Microbiol 40: 840-846
-
(1980)
Appl Environ Microbiol
, vol.40
, pp. 840-846
-
-
Dawson, K.A.1
Allison, M.J.2
Hartman, P.A.3
-
10
-
-
0000122573
-
Phylip-phylogeny inference package (version 3.2)
-
Felenstein, J (1989) Phylip-phylogeny inference package (version 3.2). Cladistics 5: 164-166
-
(1989)
Cladistics
, vol.5
, pp. 164-166
-
-
Felenstein, J.1
-
12
-
-
0001430252
-
DNA fragments differing by single base-pair substitutions are separated in denaturing gradient gels: Correspondence with melting theory
-
Fischer, SG, Lerman, LS (1983) DNA fragments differing by single base-pair substitutions are separated in denaturing gradient gels: correspondence with melting theory. Proc Natl Acad Sci USA 80: 1579-1583
-
(1983)
Proc Natl Acad Sci U S a
, vol.80
, pp. 1579-1583
-
-
Fischer, S.G.1
Lerman, L.S.2
-
13
-
-
27944442405
-
Denaturing gradient gel electrophoresis gel expansion (DGGEGE)-an attempt to resolve the limitations of co-migration in the DGGE of complex polymicrobial communities
-
Gafan, GP, Spratt, DA (2005) Denaturing gradient gel electrophoresis gel expansion (DGGEGE)-an attempt to resolve the limitations of co-migration in the DGGE of complex polymicrobial communities. FEMS Microbiol Lett 253: 303-307
-
(2005)
FEMS Microbiol Lett
, vol.253
, pp. 303-307
-
-
Gafan, G.P.1
Spratt, D.A.2
-
14
-
-
2342475768
-
The genome sequence of the anaerobic, sulfate-reducing bacterium Desulfovibrio vulgaris Hildenborough
-
Heidelberg, JF, Seshadri, R, Haveman, SA, Hemme, CL, Paulsen, IT, Kolonay, JF, Eisen, JA, Ward, N, Methe, B, Brinkac, LM, Daugherty, SC, Deboy, RT, Dodson, RJ, Durkin, AS, Madupu, R, Nelson, WC, Sullivan, SA, Fouts, D, Haft, DH, Selengut, J, Peterson, JD, Davidsen, TM, Zafar, N, Zhou, L, Radune, D, Dimitrov, G, Hance, M, Tran, K, Khouri, H, Gill, J, Utterback, TR, Feldblyum, TV, Wall, JD, Voordouw, G, Fraser, CM (2004) The genome sequence of the anaerobic, sulfate-reducing bacterium Desulfovibrio vulgaris Hildenborough. Nat Biotechnol 22: 554-559
-
(2004)
Nat Biotechnol
, vol.22
, pp. 554-559
-
-
Heidelberg, J.F.1
Seshadri, R.2
Haveman, S.A.3
Hemme, C.L.4
Paulsen, I.T.5
Kolonay, J.F.6
Eisen, J.A.7
Ward, N.8
Methe, B.9
Brinkac, L.M.10
Daugherty, S.C.11
Deboy, R.T.12
Dodson, R.J.13
Durkin, A.S.14
Madupu, R.15
Nelson, W.C.16
Sullivan, S.A.17
Fouts, D.18
Haft, D.H.19
Selengut, J.20
Peterson, J.D.21
Davidsen, T.M.22
Zafar, N.23
Zhou, L.24
Radune, D.25
Dimitrov, G.26
Hance, M.27
Tran, K.28
Khouri, H.29
Gill, J.30
Utterback, T.R.31
Feldblyum, T.V.32
Wall, J.D.33
Voordouw, G.34
Fraser, C.M.35
more..
-
15
-
-
0036139245
-
Molecular diversity of Lactobacillus spp. and other lactic acid bacteria in the human intestine as determined by specific amplification of 16s ribosomal DNA
-
Heilig, HGHJ, Zoetendal, EG, Vaughan, EE, Marteau, P, Akkermans, ADL, Vos, WM (2002) Molecular diversity of Lactobacillus spp. and other lactic acid bacteria in the human intestine as determined by specific amplification of 16s ribosomal DNA. Appl Environ Microbiol 68: 114-123
-
(2002)
Appl Environ Microbiol
, vol.68
, pp. 114-123
-
-
Hghj, H.1
Zoetendal, E.G.2
Vaughan, E.E.3
Marteau, P.4
Akkermans, A.D.L.5
Vos, W.M.6
-
16
-
-
0002079680
-
-
Keeler, RF, Van Kampen, KR, James, LF (Eds.) Academic Press, New York
-
Hooper, PT (1978) Pyrrolizidine alkaloid poisoning-pathology with particular reference to differences in animal and plant species. Effects of poisonous plants on livestock. In: Keeler, RF, Van Kampen, KR, James, LF (Eds.) Academic Press, New York, pp 161-176
-
(1978)
Pyrrolizidine Alkaloid Poisoning - Pathology with Particular Reference to Differences in Animal and Plant Species. Effects of Poisonous Plants on Livestock
, pp. 161-176
-
-
Hooper, P.T.1
-
17
-
-
0021711243
-
Australian goats detoxify the goitrogen 3-hydroxy-4-(1 h)-pyridone(dhp) after rumen infusion from an Indonesian goat
-
Jones, RJ, Lowry, JB (1984) Australian goats detoxify the goitrogen 3-hydroxy-4-(1 h)-pyridone(dhp) after rumen infusion from an Indonesian goat. Experientia 40: 1435-1436
-
(1984)
Experientia
, vol.40
, pp. 1435-1436
-
-
Jones, R.J.1
Lowry, J.B.2
-
18
-
-
0022768769
-
Successful transfer of dhp degrading bacteria from Hawaiian goats to Australian ruminants to overcome the toxicity of Leuceana
-
Jones, RJ, Megarrity, RG (1986) Successful transfer of dhp degrading bacteria from Hawaiian goats to Australian ruminants to overcome the toxicity of Leuceana. Aust Vet J 63: 259-262
-
(1986)
Aust Vet J
, vol.63
, pp. 259-262
-
-
Jones, R.J.1
Megarrity, R.G.2
-
19
-
-
0030157981
-
The distribution, diagnoses and estimated economic impact of plant poisonings and mycotoxicoses in South Africa
-
Kellerman, TS, Naude, TW, Fourie, N (1996) The distribution, diagnoses and estimated economic impact of plant poisonings and mycotoxicoses in South Africa. Onderstepoort J Vet Res 63: 65-90
-
(1996)
Onderstepoort J Vet Res
, vol.63
, pp. 65-90
-
-
Kellerman, T.S.1
Naude, T.W.2
Fourie, N.3
-
20
-
-
0034803204
-
Analysis of the rumen bacterial diversity under two different diet conditions using denaturing gradient gel electrophoresis, random sequencing, and statistical ecology approaches
-
Kocherginskaya, SA, Aminov, RI, White, BA (2001) Analysis of the rumen bacterial diversity under two different diet conditions using denaturing gradient gel electrophoresis, random sequencing, and statistical ecology approaches. Anaerobe 7: 119-134
-
(2001)
Anaerobe
, vol.7
, pp. 119-134
-
-
Kocherginskaya, S.A.1
Aminov, R.I.2
White, B.A.3
-
21
-
-
0027132620
-
A re-investigation of the alkaloids of Senecio pterophorus
-
Liddell, JR, Logie, CG (1993) A re-investigation of the alkaloids of Senecio pterophorus. Phytochemistry 34: 1629-1631
-
(1993)
Phytochemistry
, vol.34
, pp. 1629-1631
-
-
Liddell, J.R.1
Logie, C.G.2
-
22
-
-
27844490459
-
Molecular analysis of a consortium of ruminal microbes that detoxify pyrrolizidine alkaloids
-
Lodge-Ivey, SL, Rappe, MS, Johnston, WH, Bohlken, RE, Craig, AM (2005) Molecular analysis of a consortium of ruminal microbes that detoxify pyrrolizidine alkaloids. Can J Microbiol 51: 455-465
-
(2005)
Can J Microbiol
, vol.51
, pp. 455-465
-
-
Lodge-Ivey, S.L.1
Rappe, M.S.2
Johnston, W.H.3
Bohlken, R.E.4
Craig, A.M.5
-
24
-
-
0027460328
-
Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16s rRNA
-
Muyzer, G, de Waal, EC, Uitterlinden, AG (1993) Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16s rRNA. Appl Environ Microbiol 59: 695-700
-
(1993)
Appl Environ Microbiol
, vol.59
, pp. 695-700
-
-
Muyzer, G.1
De Waal, E.C.2
Uitterlinden, A.G.3
-
25
-
-
0031959006
-
Application of denaturing gradient gel electrophoresis (DGGE) and temperature gradient gel electrophoresis (TGGE) in microbial ecology
-
Muyzer, G, Smalla, K (1998) Application of denaturing gradient gel electrophoresis (DGGE) and temperature gradient gel electrophoresis (TGGE) in microbial ecology. Antonie Van Leeuwenhoek 73: 127-141
-
(1998)
Antonie Van Leeuwenhoek
, vol.73
, pp. 127-141
-
-
Muyzer, G.1
Smalla, K.2
-
26
-
-
0023476285
-
Detection and localization of single base changes by denaturing gradient gel electrophoresis
-
Myers, RM, Maniatis, T, Lerman, LS (1987) Detection and localization of single base changes by denaturing gradient gel electrophoresis. Methods Enzymol 155: 501-527
-
(1987)
Methods Enzymol
, vol.155
, pp. 501-527
-
-
Myers, R.M.1
Maniatis, T.2
Lerman, L.S.3
-
27
-
-
0030098421
-
Plant poisonings and mycotoxicoses as constraints in livestock production in East Africa: The southern African experience
-
Naudé, TW, Kellerman, TS, Coetzer, JAW (1996) Plant poisonings and mycotoxicoses as constraints in livestock production in East Africa: the southern African experience. J S Afr Vet Assoc 67: 8-11
-
(1996)
J S Afr Vet Assoc
, vol.67
, pp. 8-11
-
-
Naudé, T.W.1
Kellerman, T.S.2
Coetzer, J.A.W.3
-
28
-
-
0025950944
-
Searching protein sequence libraries: Comparison of the sensitivity and selectivity of the Smith-Waterman and Fasta algorithms
-
Pearson, WR (1991) Searching protein sequence libraries: comparison of the sensitivity and selectivity of the Smith-Waterman and Fasta algorithms. Genomics 11: 635-650
-
(1991)
Genomics
, vol.11
, pp. 635-650
-
-
Pearson, W.R.1
-
29
-
-
0034857157
-
A single band does now always represent single bacterial strains in denaturing gradient gel electrophoresis analysis
-
Sekiguchi, H, Tomioka, N, Nakahara, T, Uchiyama, H (2001) A single band does now always represent single bacterial strains in denaturing gradient gel electrophoresis analysis. Biotechnol Lett 23: 1205-1208
-
(2001)
Biotechnol Lett
, vol.23
, pp. 1205-1208
-
-
Sekiguchi, H.1
Tomioka, N.2
Nakahara, T.3
Uchiyama, H.4
-
30
-
-
0019887799
-
Identification of common molecular subsequences
-
Smith, TF, Waterman, MS (1981) Identification of common molecular subsequences. J Mol Biol 147: 195-197
-
(1981)
J Mol Biol
, vol.147
, pp. 195-197
-
-
Smith, T.F.1
Waterman, M.S.2
-
31
-
-
0034811976
-
The effect of Senecio latifolius a plant used as a South African traditional medicine, on a human hepatoma cell line
-
Steenkamp, V, Stewart, MJ, van der Merwe, S, Zuckerman, M, Crowther, NJ (2001) The effect of Senecio latifolius a plant used as a South African traditional medicine, on a human hepatoma cell line. J Ethnopharmacol 78: 51-58
-
(2001)
J Ethnopharmacol
, vol.78
, pp. 51-58
-
-
Steenkamp, V.1
Stewart, M.J.2
Van Der Merwe, S.3
Zuckerman, M.4
Crowther, N.J.5
-
32
-
-
0034080001
-
Clinical and analytical aspects of pyrrolzidine poisoning caused by South African traditional medicines
-
Steenkamp, V, Stewart, MJ, Zuckerman, M (2000) Clinical and analytical aspects of pyrrolzidine poisoning caused by South African traditional medicines. Ther Drug Monit 22: 302-306
-
(2000)
Ther Drug Monit
, vol.22
, pp. 302-306
-
-
Steenkamp, V.1
Stewart, M.J.2
Zuckerman, M.3
-
33
-
-
0027968068
-
Clustal W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson, JD, Higgins, DG, Gibson, TJ (1994) Clustal W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22: 4673-4680
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
34
-
-
0026622059
-
Characterization of rumen bacterial pyrrolizidine alkaloid biotransformation in ruminants of various species
-
Wachenheim, DE, Blythe, LL, Craig, AM (1992) Characterization of rumen bacterial pyrrolizidine alkaloid biotransformation in ruminants of various species. Vet Hum Toxicol 34: 513-517
-
(1992)
Vet Hum Toxicol
, vol.34
, pp. 513-517
-
-
Wachenheim, D.E.1
Blythe, L.L.2
Craig, A.M.3
-
35
-
-
0026721246
-
Effects of antibacterial agents on in vitro ovine ruminal biotransformation of the hepatotoxic pyrrolizidine alkaloid jacobine
-
Wachenheim, DE, Blythe, LL, Craig, AM (1992) Effects of antibacterial agents on in vitro ovine ruminal biotransformation of the hepatotoxic pyrrolizidine alkaloid jacobine. Appl Environ Microbiol 58: 2559-2564
-
(1992)
Appl Environ Microbiol
, vol.58
, pp. 2559-2564
-
-
Wachenheim, D.E.1
Blythe, L.L.2
Craig, A.M.3
-
36
-
-
0035374627
-
Detection of Lactobacillus, Pediococcus, Leuconostoc, and Weissella species in human feces by using group-specific PCR primers and denaturing gradient gel electrophoresis
-
Walter, J, Hertel, C, Tannock, GW, Lis, CM, Munro, K, Hammes, WP (2001) Detection of Lactobacillus, Pediococcus, Leuconostoc, and Weissella species in human feces by using group-specific PCR primers and denaturing gradient gel electrophoresis. Appl Environ Microbiol 67: 2578-2585
-
(2001)
Appl Environ Microbiol
, vol.67
, pp. 2578-2585
-
-
Walter, J.1
Hertel, C.2
Tannock, G.W.3
Lis, C.M.4
Munro, K.5
Hammes, W.P.6
-
37
-
-
0026067797
-
16s ribosomal DNA amplification for phylogenetic study
-
Weisburg, WG, Barns, SM, Pelletier, DA, Lane, DJ (1991) 16s ribosomal DNA amplification for phylogenetic study. J Bacteriol 173: 697-703
-
(1991)
J Bacteriol
, vol.173
, pp. 697-703
-
-
Weisburg, W.G.1
Barns, S.M.2
Pelletier, D.A.3
Lane, D.J.4
-
38
-
-
0030963608
-
Bandstab: A PCR-based alternative to cloning PCR products
-
Wilton, SD, Lim, L, Dye, D, Laing, N (1997) Bandstab: a PCR-based alternative to cloning PCR products. Biotechniques 22: 642-645
-
(1997)
Biotechniques
, vol.22
, pp. 642-645
-
-
Wilton, S.D.1
Lim, L.2
Dye, D.3
Laing, N.4
-
39
-
-
0028985270
-
The relationship between the concentration of the pyrrolizidine alkaloik mononcrotaline and the pattern of metabolites released from the isolated liver
-
Yan, CC, Huxtable, R (1995) The relationship between the concentration of the pyrrolizidine alkaloik mononcrotaline and the pattern of metabolites released from the isolated liver. Toxicol Appl Pharmacol 130: 1-8
-
(1995)
Toxicol Appl Pharmacol
, vol.130
, pp. 1-8
-
-
Yan, C.C.1
Huxtable, R.2
|