메뉴 건너뛰기




Volumn 368, Issue 2, 2007, Pages 168-177

Characterization of weak protein dimerization by direct analysis of sedimentation equilibrium distributions: The INVEQ approach

Author keywords

Protein dimerization; Sedimentation equilibrium; Thermodynamic nonideality

Indexed keywords

CURVE FITTING; DIMERIZATION; MONOMERS; PROTEINS;

EID: 34547561052     PISSN: 00032697     EISSN: 10960309     Source Type: Journal    
DOI: 10.1016/j.ab.2007.04.030     Document Type: Article
Times cited : (6)

References (31)
  • 1
    • 34547570056 scopus 로고    scopus 로고
    • Weak interactions: Optical algorithms for their study in the AUC
    • Scott D.J., Harding S.E., and Rowe A.J. (Eds), Royal Society of Chemistry, Cambridge, UK
    • Rowe A.J. Weak interactions: Optical algorithms for their study in the AUC. In: Scott D.J., Harding S.E., and Rowe A.J. (Eds). Modern Analytical Ultracentrifugation: Techniques and Methods (2005), Royal Society of Chemistry, Cambridge, UK 484-500
    • (2005) Modern Analytical Ultracentrifugation: Techniques and Methods , pp. 484-500
    • Rowe, A.J.1
  • 3
    • 0019756004 scopus 로고
    • Analysis of data from the analytical ultracentrifuge by nonlinear least-squares techniques
    • Johnson M.L., Correia J.J., Yphantis D.A., and Halvorsen H.R. Analysis of data from the analytical ultracentrifuge by nonlinear least-squares techniques. Biophys. J. 36 (1981) 575-588
    • (1981) Biophys. J. , vol.36 , pp. 575-588
    • Johnson, M.L.1    Correia, J.J.2    Yphantis, D.A.3    Halvorsen, H.R.4
  • 4
    • 0003158824 scopus 로고
    • Sedimentation equilibrium in interacting systems
    • Williams J.W. (Ed), Academic Press, New York
    • Adams E.T., and Fujita H. Sedimentation equilibrium in interacting systems. In: Williams J.W. (Ed). Ultracentrifugal Analysis in Theory and Experiment (1963), Academic Press, New York 119-128
    • (1963) Ultracentrifugal Analysis in Theory and Experiment , pp. 119-128
    • Adams, E.T.1    Fujita, H.2
  • 5
    • 0026749466 scopus 로고
    • Refinement of the omega analysis for the quantitative characterization of solute self-association by sedimentation equilibrium
    • Jacobsen M.P., and Winzor D.J. Refinement of the omega analysis for the quantitative characterization of solute self-association by sedimentation equilibrium. Biophys. Chem. 45 (1992) 119-132
    • (1992) Biophys. Chem. , vol.45 , pp. 119-132
    • Jacobsen, M.P.1    Winzor, D.J.2
  • 6
    • 33847801328 scopus 로고
    • Treatment of thermodynamic nonideality in equilibrium studies of associating solutes
    • Ogston A.G., and Winzor D.J. Treatment of thermodynamic nonideality in equilibrium studies of associating solutes. J. Phys. Chem. 79 (1975) 2496-2500
    • (1975) J. Phys. Chem. , vol.79 , pp. 2496-2500
    • Ogston, A.G.1    Winzor, D.J.2
  • 7
    • 23544458810 scopus 로고
    • The statistical thermodynamics of multicomponent systems
    • McMillan W.G., and Mayer J.E. The statistical thermodynamics of multicomponent systems. J. Chem. Phys. 13 (1945) 276-305
    • (1945) J. Chem. Phys. , vol.13 , pp. 276-305
    • McMillan, W.G.1    Mayer, J.E.2
  • 8
    • 0002505730 scopus 로고
    • Theory of solutions: II. Osmotic pressure virial expansion and light scattering
    • Hill T.L. Theory of solutions: II. Osmotic pressure virial expansion and light scattering. J. Chem. Phys. 30 (1959) 93-97
    • (1959) J. Chem. Phys. , vol.30 , pp. 93-97
    • Hill, T.L.1
  • 9
    • 0015829813 scopus 로고
    • Theory of aggregation in solution: I. General equations and application to the stacking of bases, nucleosides, etc
    • Hill T.L., and Chen Y.D. Theory of aggregation in solution: I. General equations and application to the stacking of bases, nucleosides, etc. Biopolymers 12 (1973) 1285-1312
    • (1973) Biopolymers , vol.12 , pp. 1285-1312
    • Hill, T.L.1    Chen, Y.D.2
  • 10
    • 0030064692 scopus 로고    scopus 로고
    • Direct analysis of solute self-association by sedimentation equilibrium
    • Wills P.R., Jacobsen M.P., and Winzor D.J. Direct analysis of solute self-association by sedimentation equilibrium. Biopolymers 38 (1996) 119-130
    • (1996) Biopolymers , vol.38 , pp. 119-130
    • Wills, P.R.1    Jacobsen, M.P.2    Winzor, D.J.3
  • 11
    • 0035942981 scopus 로고    scopus 로고
    • Studies of solute self-association by sedimentation equilibrium: Allowance for effects of thermodynamic nonideality beyond the consequences of nearest-neighbor interactions
    • Wills P.R., and Winzor D.J. Studies of solute self-association by sedimentation equilibrium: Allowance for effects of thermodynamic nonideality beyond the consequences of nearest-neighbor interactions. Biophys. Chem. 91 (2001) 253-262
    • (2001) Biophys. Chem. , vol.91 , pp. 253-262
    • Wills, P.R.1    Winzor, D.J.2
  • 12
    • 0018981882 scopus 로고
    • The indefinite self-association of lysozyme: Consideration of composition-dependent activity coefficients
    • Wills P.R., Nichol L.W., and Siezen R.J. The indefinite self-association of lysozyme: Consideration of composition-dependent activity coefficients. Biophys. Chem. 11 (1980) 71-82
    • (1980) Biophys. Chem. , vol.11 , pp. 71-82
    • Wills, P.R.1    Nichol, L.W.2    Siezen, R.J.3
  • 14
    • 0001639451 scopus 로고
    • Thermodynamic nonideality and sedimentation equilibrium
    • Harding S.E., Rowe A.J., and Horton J.C. (Eds), Royal Society of Chemistry, Cambridge, UK
    • Wills P.R., and Winzor D.J. Thermodynamic nonideality and sedimentation equilibrium. In: Harding S.E., Rowe A.J., and Horton J.C. (Eds). Ultracentrifugation in Biochemistry and Polymer Science (1992), Royal Society of Chemistry, Cambridge, UK 311-330
    • (1992) Ultracentrifugation in Biochemistry and Polymer Science , pp. 311-330
    • Wills, P.R.1    Winzor, D.J.2
  • 15
    • 0027292011 scopus 로고
    • Thermodynamic nonideality in macromolecular solutions: Interpretation of virial coefficients
    • Wills P.R., Comper W.D., and Winzor D.J. Thermodynamic nonideality in macromolecular solutions: Interpretation of virial coefficients. Arch. Biochem. Biophys. 300 (1993) 206-212
    • (1993) Arch. Biochem. Biophys. , vol.300 , pp. 206-212
    • Wills, P.R.1    Comper, W.D.2    Winzor, D.J.3
  • 16
    • 34247589502 scopus 로고    scopus 로고
    • Allowance for thermodynamic nonideality in sedimentation equilibrium
    • Scott D.J., Harding S.E., and Rowe A.J. (Eds), Royal Society of Chemistry, Cambridge, UK
    • Wills P.R., and Winzor D.J. Allowance for thermodynamic nonideality in sedimentation equilibrium. In: Scott D.J., Harding S.E., and Rowe A.J. (Eds). Modern Analytical Ultracentrifugation: Techniques and Methods (2005), Royal Society of Chemistry, Cambridge, UK 64-103
    • (2005) Modern Analytical Ultracentrifugation: Techniques and Methods , pp. 64-103
    • Wills, P.R.1    Winzor, D.J.2
  • 17
    • 0033804074 scopus 로고    scopus 로고
    • Analysis of sedimentation equilibrium distributions reflecting nonideal macromolecular associations
    • Wills P.R., Jacobsen M.P., and Winzor D.J. Analysis of sedimentation equilibrium distributions reflecting nonideal macromolecular associations. Biophys. J. 79 (2000) 2178-2187
    • (2000) Biophys. J. , vol.79 , pp. 2178-2187
    • Wills, P.R.1    Jacobsen, M.P.2    Winzor, D.J.3
  • 19
    • 36849121550 scopus 로고
    • Fifth and sixth virial coefficients for hard spheres and disks
    • Ree F.H., and Hoover W.G. Fifth and sixth virial coefficients for hard spheres and disks. J. Chem. Phys. 40 (1964) 939-950
    • (1964) J. Chem. Phys. , vol.40 , pp. 939-950
    • Ree, F.H.1    Hoover, W.G.2
  • 20
    • 0001737177 scopus 로고    scopus 로고
    • Exact analytical expression for a subset of fourth virial coefficients of polydisperse hard sphere mixtures
    • Blaak R. Exact analytical expression for a subset of fourth virial coefficients of polydisperse hard sphere mixtures. Mol. Phys. 95 (1998) 695-699
    • (1998) Mol. Phys. , vol.95 , pp. 695-699
    • Blaak, R.1
  • 21
    • 0014955681 scopus 로고
    • Exponential analysis of concentration or concentration difference data for discrete molecular weight distributions in sedimentation equilibrium
    • Haschemeyer R.H., and Bowers W.F. Exponential analysis of concentration or concentration difference data for discrete molecular weight distributions in sedimentation equilibrium. Biochemistry 9 (1970) 435-445
    • (1970) Biochemistry , vol.9 , pp. 435-445
    • Haschemeyer, R.H.1    Bowers, W.F.2
  • 22
    • 0016492159 scopus 로고
    • Direct analysis of sedimentation equilibrium results obtained with polymerizing systems
    • Milthorpe B.K., Jeffrey P.D., and Nichol L.W. Direct analysis of sedimentation equilibrium results obtained with polymerizing systems. Biophys. Chem. 3 (1975) 169-175
    • (1975) Biophys. Chem. , vol.3 , pp. 169-175
    • Milthorpe, B.K.1    Jeffrey, P.D.2    Nichol, L.W.3
  • 23
    • 0035965878 scopus 로고    scopus 로고
    • Analysis of thermodynamic nonideality in terms of protein solvation
    • Winzor D.J., Carrington L.E., and Harding S.E. Analysis of thermodynamic nonideality in terms of protein solvation. Biophys. Chem. 93 (2001) 231-240
    • (2001) Biophys. Chem. , vol.93 , pp. 231-240
    • Winzor, D.J.1    Carrington, L.E.2    Harding, S.E.3
  • 24
    • 0001513331 scopus 로고
    • Measurement of the extinction coefficient of prostate specific antigen using interference and absorbance optics in the Optima XL-A analytical ultracentrifuge
    • Voelker P. Measurement of the extinction coefficient of prostate specific antigen using interference and absorbance optics in the Optima XL-A analytical ultracentrifuge. Prog. Colloid Polym. Sci. 99 (1995) 162-166
    • (1995) Prog. Colloid Polym. Sci. , vol.99 , pp. 162-166
    • Voelker, P.1
  • 25
    • 0034666656 scopus 로고    scopus 로고
    • Analysis of protein self-association under conditions of thermodynamic nonideality
    • Behlke J., and Ristau O. Analysis of protein self-association under conditions of thermodynamic nonideality. Biophys. Chem. 87 (1999) 1-13
    • (1999) Biophys. Chem. , vol.87 , pp. 1-13
    • Behlke, J.1    Ristau, O.2
  • 26
    • 0347989358 scopus 로고    scopus 로고
    • Determination of the net charge (valence) of a protein: A fundamental but elusive parameter
    • Winzor D.J. Determination of the net charge (valence) of a protein: A fundamental but elusive parameter. Anal. Biochem. 325 (2004) 1-20
    • (2004) Anal. Biochem. , vol.325 , pp. 1-20
    • Winzor, D.J.1
  • 27
    • 4444300551 scopus 로고    scopus 로고
    • Limitations of the ultracentrifugal approach for measuring the effective net charge of a macroion
    • Winzor D.J., Carrington L.E., and Harding S.E. Limitations of the ultracentrifugal approach for measuring the effective net charge of a macroion. Anal. Biochem. 333 (2004) 114-118
    • (2004) Anal. Biochem. , vol.333 , pp. 114-118
    • Winzor, D.J.1    Carrington, L.E.2    Harding, S.E.3
  • 28
    • 4644351191 scopus 로고    scopus 로고
    • Determination of protein charge by capillary electrophoresis
    • Winzor D.J., Jones S., and Harding S.E. Determination of protein charge by capillary electrophoresis. Anal. Biochem. 333 (2004) 225-229
    • (2004) Anal. Biochem. , vol.333 , pp. 225-229
    • Winzor, D.J.1    Jones, S.2    Harding, S.E.3
  • 29
    • 0001351894 scopus 로고
    • Rapid attainment of sedimentation equilibrium
    • Van Holde K.E., and Baldwin R.L. Rapid attainment of sedimentation equilibrium. J. Phys. Chem. 62 (1958) 734-743
    • (1958) J. Phys. Chem. , vol.62 , pp. 734-743
    • Van Holde, K.E.1    Baldwin, R.L.2
  • 30
    • 0006604756 scopus 로고    scopus 로고
    • On the correct analysis of low-speed sedimentation equilibrium distributions recorded by the Rayleigh interference optical system in a Beckman XL-I ultracentrifuge
    • Hall D.R., Harding S.E., and Winzor D.J. On the correct analysis of low-speed sedimentation equilibrium distributions recorded by the Rayleigh interference optical system in a Beckman XL-I ultracentrifuge. Prog. Colloid Polym. Sci. 113 (1999) 69-75
    • (1999) Prog. Colloid Polym. Sci. , vol.113 , pp. 69-75
    • Hall, D.R.1    Harding, S.E.2    Winzor, D.J.3
  • 31
    • 0001038767 scopus 로고
    • Equilibrium ultracentrifugation of dilute solutions
    • Yphantis D.A. Equilibrium ultracentrifugation of dilute solutions. Biochemistry 3 (1964) 297-317
    • (1964) Biochemistry , vol.3 , pp. 297-317
    • Yphantis, D.A.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.