Characterization and RT-PCR detection of dsRNA mycoviruses from the Oyster mushroom, pleurotus ostreatus

Plant Pathology Journal

Volumn 20, Issue 3, 2004, Pages 200-205

  Seo, Jang Kyun ^a   Lim, Won Seok ^a   Jeong, Ji Hye ^b   Yoo, Young Bok ^c   Yie, Se Won ^b   Kim, Kook Hyung ^a  

^a School of Agricultural Biotechnology Center for Plant Molecular Genetics and Breeding Research   (South Korea)

^b Kangwon National University   (South Korea)

^c National Institute of Animal Science   (South Korea)

Author keywords

DsRNA mycovirus; Partitivirus; Pleurotus ostreatus; RT PCR detection

Indexed keywords

EID: 34547524406     PISSN: 15982254     EISSN: 20939280     Source Type: Journal    
DOI: 10.5423/PPJ.2004.20.3.200     Document Type: Article

References (38)

1. Boland, G. J. 1992. Hypovirulence and double-stranded RNA in Sclerotinia sclerotiorum. Can. J. Plant Pathol. 14:10-17.
2. Chen, B., Choi, G. H. and Nuss, D. L. 1994. Attenuation of fungal virulence by synthetic infectious hypovirus transcripts. Science 264:1762-1764.
3. Cheng, J., Jiang, D., Fu, Y, Li, G., Peng, Y. and Ghabrial, S. A. 2003. Molecular characterization of a dsRNA totivirus infecting the sclerotial parasite Coniothyrium minitans. Virus Res. 93:41-50.
4. Choi, G. H. and Nuss, D. L. 1992. A viral gene confers hypovirulence associated traits to the chestnut blight fungus. EMBO J. 11:473-477.
5. Chu, Y-M., Jeon, J.-J., Yea, S.-J., Kim, Y-H., Yun, S.-H., Lee, Y- W. and Kim, K.-H. 2002. Double-stranded RNA mycovirus from Fusarium graminearum. Appl. Environ. Microbiol. 68:2529-2534.
6. Chu, Y.-M., Lim, W.-S., Yea, S.-J., Cho, J.-D., Lee, Y.-W. and Kim, K.-H. 2004. Complexity of dsRNA mycovirus isolated from Fusarium graminearum. Virus Genes 28:135-143.
7. Cole, T. E., Muller, B., Hong, Y., Brasier, C. M. and Buck, K. W. 1998. Complexity of virus-like double-stranded RNA elements in a diseased isolate of the Dutch elm disease fungus, Ophiostoma novo-ulmi. J. Phytopathol 146:593-598.
8. Compel, P., Papp, I., Bibo, M., Fekete, C. and Homok, L. 1999. Genetic interrelationships and genome organization of doublestranded RNA elements of Fusarium poae. Virus Genes 18:49-56.
9. Dieleman-Van Zaayen, A. 1969. A virus disease of cultivated mushroom in the Netherlands. Neth. J. PI Pathol 74:48-51.
10. Dieleman-Van Zaayen, A. 1972. Intracellular appearance of mushroom virus in fruiting bodies and basidiospores of Agari- cus blsporus. Virology 47:94-104.
11. Ghabrial, S. A. 1986. A transmissible disease of Helminthospo- rium victoriae evidence for a viral etiology, pp. 164-176. In: Buck, K.W. ed. Fungal Virology. CRC Press, Boca Raton.
12. Go, S. J., Cha, D. Y., Shin, G. C. and Wessels, J. G. H. 1992. Molecular analysis of double-stranded RNA in abnormal growing Oyster-mushrooms, Pleurotus florida and P. ostreatus due to Virus Injection. Kor. My col. 20:234-239.
13. Goodin, M. M., Schlagnhaufer, B. and Romaine, C. P. 1992. Encapsidation of the La France disease-specific doublestranded RNA's in 36 nm isometric viruslike particles. Phytopathology 82:285-290.
14. Goodin, M. M., Schlagnhaufer, B., Weir, T. and Romaine, C. P. 1997. Characterization of an RNA-dependent RNA polymerase activity associated with La France isometric virus. J. Virol 11:2264-2269.
15. Gubler, U. and Hoffman, B. J. 1983. A simple and very efficient method for generating cNA libraries. Gene 25:163-269.
16. Hammar, S., Fulbright, D. W. and Adams, G. C. 1989. Association of double-stranded RNA with low virulence in an isolate of Leucostoma persoonii. Phytopathology 79:568-572.
17. Hicks, R. T. G. and Haughton, K. L. 1986. Detection of double- stranded RNA in shake-cultures of Agaricus bisporus affected by La France disease. Trans. Br. MycoL Soc. 86:578-584.
18. Hillman, B. I., Tian, Y., Bedker, P. J. and Brown, M. P. 1992. A North American hypovirulent isolate of the chestnut blight fungus with European isolate-related dsRNA. J. Gen. Virol 73:681-686.
19. Hollings, M. 1962. Viruses associated with dieback disease of cultivated mushrooms. Nature 196:962-965.
20. Jian, J. H., Lakshman, D. K. and Tavantzis, S. M. 1998. A viru- lence-associated, 6.4-kb, double-stranded RNA from Rhizoc- tonia solani is phylogenetically related to plant bromoviruses and electron transport enzymes. MoL Plant Microbe Interact. 11:601-609.
21. Koonin, E. V. 1991. The phylogeny of RNA-dependent RNA polymerases of positive-strand RNA viruses. J. Gen. Virol. 72:2197-2206.
22. Koonin, E. V. and Dolja, V. V. 1993. Evolution and taxonomy of positive-strand RNA viruses: implications of coniparative analysis of amino acid sequences. Crit. Rev. Biochem. Mol Biol 28:375-430.
23. Koons, K., Schlagnhaufer, B. and Romaine, C. P. 1989. Double stranded RNAs in mycelial cultures of Agaricus bisporus affected by La France disease. Phytopathology 79:1272-1275.
24. Lee, H.-S. 2000. Detection of three isometric viruses in oyster mushroom, Pleurotus ostreatus. Kor. Soc. MycoL News Lett. 12:5-6.
25. Lemke, P. A. 1979. Viruses and plasmids in fungi. Marcel Dekker, New York. p. 653.
26. Liang, P., Liu, H. and Chen, K. 1990. Intracellular appearance, morphological features and properties of oyster mushroom virus. MycoL Res 94:529-537.
27. Preisig, O., Moleleki, N., Smit, W. A., Wingfield, B. D. and Wingfield M.J. 2000. A novel RNA mycovirus in a hypovirulent isolate of the plant pathogen Diaporthe ambigua. J. Gen. Virol. 81:3107-3114.
28. Revill, P. A. and Wright, P. J. 1997. RT-PCR detection of dsRNAs associated with La France disease of the cultivated mushroom Agaricus bisporus (Lange) Imbach. J. Virol. Methods 63:17-26.
29. Ross, R. C., Brown, G. A. and Romaine, C. P. 1986. Recent experience in detecting viral double-stranded RNA in commercial mushroom crops and its effect on yield, pp. 321-329. In: Wuest, P. J., Royse, D. J. and Beelman, R. B. eds. Cultivating Edible Fungi. Elsevier, Amsterdam.
30. Schisler, L. C., Sinden, J. W. and Sigel, E. M. 1967. Etiology, symptomatology, and epidemiology of a virus disease of cultivated mushrooms. Phytopathology 57:519-526.
31. Sinden, J. W. and Hauser, E. 1950. Report on two new mushroom diseases. Mush. Sci. 1:96-100.
32. Thompson, J. D., Higgins, D. G. and Gibson, T. J. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:4673-4680.
33. van der Lende, T. R., Harmsen, M. C. and Wessels, J. G. H. 1994. Double-stranded RNAs and proteins associated with the 34 nm virus particles of the cultivated mushroom Agaricus bisporus. J. Gen. Virol. 75:2533-2536.
34. van der Lende, T. R., Harmsen, M. C., Go, S. J. and Wessels, J. G. H. 1995. Double-stranded RNA mycoviruses in mycelium of Pleurotus ostreatus. FEMS Micorbiol. Lett. 125:51-56.
35. van der Lende, T. R., Duitman, E. H., Gunnewijk, M. G., Yu, L. and Wessels, J. G. H. 1996. Functional analysis of dsRNAs (LI, L3, L5, and M2) associated with isomatric 34 nm virions of Agaricus bisporus (white button mushroom). Virology 217:88.
36. Wach, M. P., Sriskantha, A. and Romaine, C. P. 1987. Double-stranded RNAs associated with La France disease of the commercial mushroom. Phytopathology 77:1321-1325.
37. Yu, H. J., Lim, D. and Lee, H.-S. 2003. Characterization of a novel single-stranded RNA mycovirus in Pleurotus ostreatus. Virology 314:9-15.
38. Zhang, J. and Madden, T. L. 1997. PowerBLAST: A new network BLAST application for interactive or automated sequence analysis and annotation. Genome Res. 7:649-656.