Pathway analysis: Combining microarray data and physiological data to study myogenesis

Archiv fur Tierzucht

Volumn 50, Issue SPEC. ISS., 2007, Pages 27-31

  Te Pas, Marinus F W ^a   Ina, Hulsegge ^a   Pool, Marco H ^a  

^a WAGENINGEN UNIVERSITY   (Netherlands)

Author keywords

Bioinformatics; KEGG database; Microarrays; Myogenesis; Pathway analysis

Indexed keywords

ANIMALIA; MUS; RATTUS; SUIDAE;

EID: 34547322965     PISSN: 00039438     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (11)

1. CAGNAZZO, M.; TE PAS, M.F.W.; PRIEM, J.; DE WIT, A.; POOL, M.H.; DAVOLI, R.; RUSSO, V.; Comparison of prenatal muscle tissue expression profiles of two pig breeds differing in muscle characteristics. J. Anim. Sci. 84 (2006), 1-10
2. KANEHISA, M.; GOTO, S.; HATTORI, M.; AOKI-KINOSHITA, K.F., ITOH, M.; KAWASHIMA, S.; KATAYAMA, T; ARAKI, M.; HIRAKAWA, M.; From genomics to chemical genomics: new developments in KEGG. Nucl. Acids Res. 34 (2006), D354-D357
3. KAWASHIMA, S.; KATAYAMA, T.; SATO, Y.; KANEHISA, M.; KEGG API: A web service using SOAP/WSDL to access the KEGG system. Genome informatics 14 (2003), 673-674
4. MERKS, J.W.M.; One century of genetic changes in pigs and the future needs. In The Challenge of Genetic Change in Animal Production. Occasional Publication. Brit Soc Anim Sci, Edited by Hill WG, Bishop SC, McGuirk B, McKay JC, Simm G, Webb AJ. Edinburgh 27 (2000), 8-19
5. PAPIN, J.A.; STELLING, J.; PRICE, N.D.; KLAMT, S.; SCHUSTER, S.; PALSSON, B.O.; Comparison of network-based pathway analysis methods. Trends Biotechnol 22 (2004), 400-405
6. REHFELDT, C.; FIEDLER, I. ; STICKLAND, N.C.; Number and size of muscle fibres in relation to meat production. In Muscle Development of Livestock Animals Physiology, Genetics, and Meat Quality Edited by te Pas MFW, Everts ME, Haagsman HP. CABI publishers, Wallingford, Oxfordshire, UK, (2004), 1-38.
7. STICKLAND, N.C., BAYOL, S., ASHTON, C., REHFELDT, C.; Manipulation of muscle fibre number during prenatal development. In Muscle Development of Livestock Animals - Physiology, Genetics, and Meat Quality Edited by te Pas MFW, Everts ME, Haagsman HP. CABI publishers, Wallingford, Oxfordshire, UK, (2004), 69-82.
8. TE PAS, M.F.W.; DE WIT, A.A.C.; PRIEM, J.; CAGNAZZO, M.; DAVOLI, R.; RUSSO, V.; POOL, M.H.; Transcriptome expression profiles in prenatal pigs in relation to myogenesis. J. Muscle Res. Cell Motil. 26 (2005A), 157-165
9. TE PAS, M.F.W.; CAGNAZZO, M.; DE WIT, A.A.C.; PRIEM, I.; POOL, M.H.; DAVOLI, R.; Muscle transcriptomes of Duroc and Pietrain pig breeds during prenatal formation of skeletal muscle tissue using microarray technology. Arch. Tierz., Dummerstorf 48 (2005B) Special Issue, 141-147
10. TE PAS, M.F.W.; POOL, M.H.; HULSEGGE, I.; JANSS, L.L.G.; Analysis of the differential transcriptome expression profiles during prenatal muscle tissue development. Arch. Tierz., Dummerstorf 49 (2006) Special Issue, 110-115
11. TE PAS, M.F.W.; SOUMILLION, A.; The use of physiologic and functional genomic information of the regulation of the determination of skeletal muscle mass in livestock breeding strategies to enhance meat production. Current Genomics 2 (2001), 285-304