Genetic variation and differentiation in striped field mouse Apodemus agrarius inferred from RAPD-PCR analysis

Russian Journal of Genetics

Volumn 43, Issue 6, 2007, Pages 665-676

  Atopkin, D M ^a   Bogdanov, A S ^b   Chelomina, G N ^a  

^a RUSSIAN ACADEMY OF SCIENCES   (Russian Federation)

^b KOL TSOV INSTITUTE OF DEVELOPMENTAL BIOLOGY   (Russian Federation)

Author keywords

[No Author keywords available]

Indexed keywords

ANIMALIA; APODEMUS AGRARIUS;

EID: 34547316436     PISSN: 10227954     EISSN: 16083369     Source Type: Journal    
DOI: 10.1134/S1022795407060105     Document Type: Article

References (48)

1. Argiropulo, A.I., Family Muridae (Mice), in Fauna SSSR. Mlekopitayushchie (Fauna of the USSR: Mammals), Leningrad: Akad. Nauk SSSR, 1940, vol. 3, issue 5, pp. 1-169.
2. Corbet, G.B., The Mammals of the Palaearctic Region: A Taxonomic Review, London: Cornell Univ. Press, 1978.
3. Karaseva, E.V., Tikhonova, G.N., and Bogomolov, P.L., Striped Field Mice (Apodemus agrarius) Distributional Range in the USSR and Habitat Specificity in Different Parts of the Range, Zool. Zh., 1992, vol. 71, no. 6, pp. 106-115.
4. Gromov, I.M. and Erbaeva, M.A., Mlekopitayushchie fauny Rossii i sopredel'nykh territorii. Zaitseobraznye i gryzuny (Mammals of the USSR and Neighboring Territories: Hares and Rodents), St. Petersburg, 1995.
5. Pavlenko, M.V., Protein Polymorphism and Systematics of the Genus Apodemus, Extended Abstract of Cand. Sci. (Biol.) Dissertation, Vladivostok, 1997.
6. Mitchell-Jones, A.J., Amori, G., Bogdanowicz, W., et al., Atlas of European Mammals, London: Academic, 1999.
7. Musser, G.G. and Carleton, M.D., Family Muridae, Mammal Species of the World: A Taxonomic and Geographic Reference, Wilson, D.E. and Reeder, D.M., Eds., Smithsonian Inst., 2nd ed., 1993, pp. 501-755.
8. Pavlinov, I.Ya., Yakhontov, E.L., and Agadzhanyan, A.K., Mlekopitayushchie Evrazii (sistematiko-geograficheskii spravochnik), T. 1: Rodentia (Mammals of Eurasia: A Systematic and Geographic Handbook, vol. 1: Rodentia), Moscow: Mosk. Gos. Univ., 1995.
9. Ellerman, J.R. and Morrison-Scott, T.C.S., Checklist of Palaearctic and Indian Mammals, 1758 to 1946, London: British Museum, 1951.
10. Corbel, G.B. and Hill, J.E., The Mammals of the Indomalayan Region: A Systematic Review, Oxford: Univ. Press, 1992.
11. Musser, G.G., Brothers, E.M., Carleton, M.D., and Hutterer, R., Taxonomy and Distributional Records of Oriental and European Apodemus, with a Review of the Apodemus-Sylvaemus Problem, Bonner zoologische Beitrage, 1996, vol. 46, nos. 1-4, pp. 143-190.
12. Suzuki, H., Sato, J.J., Tsuchiya, K., et al., Molecular Phylogeny of Wood Mice (Apodemus, Muridae) in East Asia, Biol. J. Linn. Soc., 2003, vol. 80, pp. 469-481.
13. Boyeskorov, G., Timm, U., and Lyapunova, E., Karyplogical Study of Two Apodemus Species (Rodentia, Muridae) from the Baltic Countries, Proc. First Baltic Theriological Conference: Acta et Commentationes, Univ. Tartuensis, 1992, issue 955, pp. 81-87.
14. Boeskorov, G.G., Kartavtseva, I.V., Zagorodnyuk, I.V., et al., Nucleolus Organizer Regions and B-Chromosomes of Wood Mice (Mammalia, Rodentia, Apodemus), Russ. J. Genet., 1995, vol. 31, no. 2, pp. 156-163.
15. Kartavtseva, I.V. and Pavlenko, M.V., Chromosome Variation in the Striped Field Mouse Apodemus agrarius (Rodentia: Muridae), Rus. J. Genetics, 2000, vol. 36, no. 2, pp. 162-174.
16. Kartavtseva, I.V., Kariosistematika lesnykh i polevykh myshei (Rodentia: Muridae) (Karyosystematics of Wood and Field Mice (Rodentia: Muridae)), Vladivostok: Dal'nauka, 2002.
17. Soldatović, B., Dulić.B., Savić, I., Rimsa, D. Hromozomi Dve Vrste Rpda Apodemus (A. agrarius i A. mystacinus-Mammalia, Rodentia) iz Jugoslavije, Arhiv Biolockih Nauka (Beograd), 1969, vol. 21, nos. 1-4, pp. 27-32.
18. Soldatović, B., Savić, I., Dulić, B., et al., Prilog Poznavanju Kariotipa Roda Apodemus Kaup, 1829 (Mammalia, Rodentia), Arhiv Bioločkih Nauka (Beograd), 1972, vol. 24, nos. 3-4, pp. 125-130.
19. Soldatović, B., Savić, I., Seth, P., et al., Comparative Karyological Study of the Genus Apodemus (Kaup, 1829), Acta Veterinaria (Beograd), 1975, vol. 25, no. 1, pp. 1-10.
20. Koh, H.S., Systematic Studies of Korean Rodents: III. Morphometric and Chromosomal Analyses of Striped Field Mice, Apodemus agrarius chejuensis Jones and Johnson, from Jeju-Do, Korean J. Syst. Zool., 1987, vol. 3, no. 1, pp. 24-40.
21. Koh, H.S., Systematic Studies of Korean Rodents: V. Morphometric and Chromosomal Analyses of Island Populations of Striped Field Mice (Apodemus agrarius coreae) in Southwestern Coasts of the Korean Peninsula, Korean J. Syst. Zool., 1989, vol. 5, no. 1, pp. 1-12.
22. Bulatova, N.Sh., Nadjafova, R.S., and Kozlovsky, A.I., Cytotaxonomic Analysis of Species of the Genera Mus, Apodemus and Rattus in Azerbaijan, Zeitschrift Zool. Syst. Evol. Forschung, 1991, vol. 29, no. 2, pp. 139-153.
23. Mezhzherin, S.V. and Zykov, A.E., Genetic Divergence and Allozyme Variability in Mice of the Genus Apodemus sensu lato (Muridae, Rodentia), Tsitol. Genet., 1991, vol. 25, no. 4, pp. 51-59.
24. Bogdanov, A.S., Study of the Early Divergence Stages in a Group of Wood and Field Mice Using Molecular Genetic Methods, Extended Abstract of Cand. Sci. (Biol.) Dissertation, Moscow, 2002.
25. David, A.I., Development and Biogeographic Characters of Anthropogen Theriofauna in Moldavia, Extended Abstract of Doctoral (Biol.) Dissertation, Kiev, 1975.
26. David, A.I. and Chemyrtan, G.D., History of Theriofauna Development in Holocene of Moldavia, in Istoriya biogeotsenozov SSSR v golotsene (Biogeocoena History of the USSR during Holocene), Moscow: Nauka, 1976, pp. 207-213.
27. Ivakina, N.V., Strukova, T.V., Borodin, A.V., and Stefanovskii, V.V., Some Data on Formation of Contemporary Ecosystems of Middle and South Transurals, Pale ontologic. Zh., 1997, no. 3, pp. 25-29.
28. Chernukha, Yu.G., Evdokimova, O.A., and Chekhovich, A.V., The Results of Karyologic and Immunobiological Study of Striped Field Mouse Apodemus agrarius from Different Parts of the Geographical Range, Zool. Zh., 1986, vol. 65, no. 3, pp. 471-475.
29. Suzuki, H., Tsuchiya, K., Sakaizumi, M., et al., Differentiation of Restriction Sites in Ribosomal DNA in the Genus Apodemus, Biochem. Genet., 1990, vol. 28, nos. 3/4, pp. 137-149.
30. Koh, S.H. and Yoo, B.S., Variation of Mitochondrial DNA in Two Subspecies of Striped Field Mouse, Apodemus agrarius coreae and Apodemus agrarius chejuensis, from Korea, Korean J. Zool, 1992, vol. 35, pp. 332-338.
31. Koh, S.H.,Yoo, S.K., Kim, S.B., and Yoo, B.S., Variation of Mitochondrial DNA in Striped Field Mice, Apodemus agrarius coreae Thomas (Mammalia, Rodentia), from the Korean Peninsula, Korean J. Syst. Zool., 1993, vol. 9, no. 2, pp. 171-179.
32. Han, S.H., Wakana, Sh., Suzuki, H., et al., Variation of the Mitochondrial DNA and the Nuclear Ribosomal DNA in the Striped Field Mouse Apodemus agrarius on the Mainland and Offshore Islands of South Korea, Mammal Study, 1996, vol. 21, pp. 125-136.
33. Makova, K.D., Nekrutenko, A., and Baker, R.J., Evolution of Microsatellite Alleles in Four Species of Mice (Genus Apodemus), J. Mol. Evol., 2000, vol. 51, no. 2, pp. 166-172.
34. Koh, H.S., Lee, W.-J., and Kocher, T.D., The Genetic Relationships of Two Subspecies of Striped Field Mice, Apodemus agrarius coreae and Apodemus agrarius chejuensis, Heredity, 2000, vol. 85, pp. 30-36.
35. Maniatis, T., Sambrook, J., and Fritsch, E.F., Molecular Cloning: A Laboratory Manual, New York: Cold Spring Harbor Lab., 1982.
36. Williams, J.G.K., Kubelik, A.R., Livak, J.K., et al., DNA Polymorphisms Amplified by Arbitrary Primers Are Useful as Genetic Markers, Nucleic Acids Res., 1990, vol. 18, pp. 6531-6535.
37. Curtsinger, J.W., Fukui, H.H., Resler, A.S., et al., Genetic Analysis of Extended Life Span in Drosophila melanogaster: I. RAPD Screen for Genetic Divergence between Selected and Control Lines, Genetica, 1998, vol. 104, pp. 21-32.
38. Pokrovskii, V.V., Fedorov, N.A., Shipulin, G.A., et al., Metodicheskie rekomendatsii po provedeniyu robot v diagnosticheskikh laboratoriyakh, ispol'zuyushchikh metod polimeraznoi tsepnoi reaktsii (Methodic Guidelines for Diagnostic Laboratory Experiments with Polymerase Chain Reaction), Moscow: Gos. Komitet Sanitarno-Epidemiol. Nadzora RF, 1995.
39. Nei, M., Estimation of Average Heterozygosity and Genetic Distance from a Small Number of Individuals, Genetics, 1978, vol. 89, no. 3, pp. 583-590.
40. Nei, M., Analysis of Gene Diversity in Subdivided Populations, Proc. Natl. Acad. Sci. USA, 1973, vol. 70, no. 12, pp. 3321-3323.
41. Nei, M., Genetic Distance between Populations, Am. Nat., 1972, vol. 106, no. 949, pp. 283-292.
42. Borovikov, V.P., Populyarnoe wedenie v programmu Statistica (Popular Introduction to the Statistica Program), Moscow: Komp'yuter Press, 1998.
43. Yeh, F.C. and Boyle, T.B.J., Population Genetic Analysis of Co-Dominant and Dominant Markers and Quantitative Traits, Belgian J. Botany, 1997, vol. 129, p. 159.
44. Rohlf, J.F., Numerical Taxonomy System of Multivariate Statistical Programs (NTSYS-pc), 1992.
45. Miller, M.P., Tools for Population Genetics Analyses (TFPGA): A Windows Program for the Analysis ofAllozyme and Molecular Population Genetic Data, Version 1.3, Computer Software Distributed by Author, 1997.
46. Van de Peer, Y. and de Wachter, R., TREECON for Windows: A Software Package for the Constructions and Drawing of Evolutionary Trees for the Microsoft Windows Environment, Comput. Appl. Biosci., 1994, vol. 10, pp. 569-570.
47. Van de Peer, Y. and de Wachter, R., Construction of Evolutionary Distance Trees with TREECON for Windows: Accounting for Variation in Nucleotide Substitution Rate Among Sites, Comput. Appl. Biosci., 1997, vol. 13, pp. 227-230.
48. Mezhzherin, S.V., Genetic and Taxonomic Homogeneity of the East Asian Mouse Alsomys major (Rodentia, Muridae), Vestn. Zool., 2001, vol. 35, no. 2, pp. 43-48.