Hansschlegelia plantiphila gen. nov. sp. nov., a new aerobic restricted facultative methylotrophic bacterium associated with plants

Systematic and Applied Microbiology

Volumn 30, Issue 6, 2007, Pages 444-452

  Ivanova, Ekaterina ^a   Doronina, Nina ^a   Trotsenko, Yuri ^a  

^a SKRYABIN INSTITUTE OF BIOCHEMISTRY AND PHYSIOLOGY OF MICROORGANISMS   (Russian Federation)

Author keywords

Aerobic restricted facultative methylotroph; Phylogeny; Phytosymbiont; Ribulose bisphosphate pathway; Schlegelia plantiphila gen. nov. sp. nov.; Taxonomy

Indexed keywords

ALCOHOL; AUXIN; CARBON; CARBON DIOXIDE; CARDIOLIPIN; CYANOCOBALAMIN; CYCLOPROPANE; CYTOKININ; DNA; FATTY ACID; FORMIC ACID; GLYCEROL; HYDROGEN; INULIN; METHANOL; METHYLAMINE; PHOSPHATIDYLCHOLINE; PHOSPHATIDYLETHANOLAMINE; PHYTOHORMONE; RIBULOSE PHOSPHATE; RNA 16S; SERINE; UBIDECARENONE; UBIQUINONE;

AEROBIC BACTERIUM; ALPHAPROTEOBACTERIA; ARTICLE; BACTERIAL GROWTH; BACTERIAL STRAIN; BACTERIUM IDENTIFICATION; BACTERIUM ISOLATION; DNA DNA HYBRIDIZATION; HANSSCHLEGELIA PLANTIPHILA; METHYLOTROPHIC BACTERIUM; NEW GENUS; NEW SPECIES; NONHUMAN; NUCLEOTIDE SEQUENCE; PLANT MICROORGANISM INTERACTION; PRIORITY JOURNAL;

ALPHAPROTEOBACTERIA; BACTERIA (MICROORGANISMS); NEGIBACTERIA; PICEA PUNGENS;

EID: 34547205131     PISSN: 07232020     EISSN: 16180984     Source Type: Journal    
DOI: 10.1016/j.syapm.2007.03.001     Document Type: Article

References (28)

1. Anthony C., and Williams P. The structure and mechanism of methanol dehydrogenase. Biochim. Biophys. Acta 1647 (2003) 18-23
2. Basile D.V., Basile M.R., Li Q.-Y., and Corpe W.A. Vitamin B12-stimulated growth and development of Jungermannia leiantha Grolle and Gymnocolea inflata (Huds.) Dum. (Hepaticae). Bryologist 88 2 (1985) 77-81
3. Brenner, Krieg, Staley (Eds.), The Alpha-, Beta- and Epsilonproteobacteria, Part C. Bergey's Manual of Systematic Bacteriology, vol. 2, second ed., Springer SBM, New York, NY, 2005.
4. Cizkova R. Acidification stress of root environments related to endogenous cytokinins and gibberellins in oak seedlings. Biol. Plant. 32 2 (1990) 97-103
5. Doronina N.V., Braus-Stromeyer S.A., Leisinger T., and Trotsenko Y.A. Isolation and characterization of a new facultatively methylotrophic bacteria: description of Methylorhabdus multivorans. gen. nov., sp.nov. Syst. Appl. Microbiol. 18 (1995) 92-98
6. Doronina N.V., Darmaeva T.D., and Trotsenko Y.A. Methylophaga alcalica sp. nov., a novel alkaliphilic and moderately halophilic, obligately methylotrophic bacterium from the East Mongolian saline soda lake. Int. J. Syst. Evol. Microbiol. 53 (2003) 223-229
7. Doronina N.V., Ivanova E.G., Suzina N.E., and Trotsenko Y.A. Methanotrophs and methylobacteria are found in woody plant tissues within a winter period. Microbiology (Rus. Mikrobiologiya, Engl. Transl.) 73 (2004) 702-709
8. Fall R. Cycling of methanol between plants, methylotrophs and the atmosphere. In: Lidstrom M.E., and Tabita F.R. (Eds). Microbial Growth on C1 Compounds (1996), Kluwer Academic Publishers, Dordrecht 343-350
9. Felsenstein J. PHYLIP (phylogenic inference package) version 3.2. Cladistics 5 (1989) 164-166
10. Galbally I.E., and Kirstine W. The production of methanol by flowering plants and the global cycle of methanol. J. Atmos. Chem. 43 (2002) 195-229
11. Gordon S.A., and Weber R.P. Colorimetric estimation of indole-acetic acid. Plant Physiol. 26 (1951) 192-195
12. Hanson A.D., and Roje S. One-carbon metabolism in higher plants. Annu. Rev. Plant Physiol. Plant Mol. Biol. 52 (2001) 119-137
13. Johnson J.L. DNA reassociation and RNA hybridization of bacterial nucleic acids. Methods Microbiol. 28 (1985) 33-74
14. Kamikubo T. Microbiological assay procedures for vitamin B12. Vitamins 11 (1956) 328-338
15. Keppler F., Hamilton J.T.G., Brab M., and Rockmann T. Methane emission from terrestrial plants under aerobic conditions. Nature 439 (2006) 187-191
16. Lane D.J. 16S/23S rRNA sequencing. In: Stackebrandt E., and Goodfellow M. (Eds). Nucleic Acid Techniques in Bacterial Systematics (1991), Wiley, Chichester 115-175
17. MacDonald R.C., and Fall R. Detection of substantial emissions of methanol from plants to the atmosphere. Atmos. Environ. 27A (1993) 1709-1713
18. Marmur J.A. A procedure for the isolation of deoxyribonucleic acid from microorganisms. J. Mol. Biol. 3 (1961) 208-214
19. Martens J.-H., Barg H., Warren M.J., and Jahn D. Microbial production of vitamin B12. Appl. Microbiol. Biotechnol. 58 (2002) 275-285
20. McDonald I.R., and Murrell J.C. The methanol dehydrogenase structural gene mxaF and its use as a functional gene probe for methanotrophs and methylotrophs. Appl. Environ. Microbiol. 63 8 (1997) 3218-3224
21. Nitsch J.P., and Nitsch C. Studies on the growth of coleoptile and first internode sections: a new sensitive straight-growth test for auxins. Plant Physiol. 31 (1956) 94-111
22. Owen R.J., and Lapage S.P. The thermal denaturation of purified bacterial deoxyribonucleic acid and its taxonomic applications. J. Appl. Bacteriol. 41 (1976) 335-340
23. Schneider E.A., and Wightman F. Metabolism of auxin in higher plants. Ann. Rev. Plant Physiol. 25 (1974) 487-513
24. Strimmer K., and von Haeseler A. Quartet puzzling: a quartet maximum likelihood method for reconstructing tree topologies. Mol. Biol. Evol. 13 (1996) 964-969
25. Trotsenko Y.A., Doronina N.V., and Govorukhina N.I. Metabolism of non-motile obligately methylotrophic bacteria. FEMS Microbiol. Lett. 3 (1986) 293-297
26. Trotsenko Y.A., Ivanova E.G., and Doronina N.V. Aerobic methylotrophic bacteria as phytosymbionts. Microbiology (Rus. Mikrobiologiya, Engl. Transl.) 70 (2001) 725-736
27. Van de Peer Y., and de Wachter R. TREECON for Windows: a software package for the construction and drawing of evolutionary trees for the Microsoft Windows environment. CABIOS 10 (1994) 569-570
28. Yokota T., Murofushi N., and Takahashi N. Extraction, purification, identification. In: MacMillan J. (Ed). Hormonal Regulation of Development vol. 1 (1980), Springer, Berlin 113-202