AFLP-based genetic linkage maps of the blue mussel (Mytilus edulis)

Animal Genetics

Volumn 38, Issue 4, 2007, Pages 340-349

  Lallias, D ^a,b   Lapegue S ^a   Hecquet, C ^a   Boudry, P ^a   Beaumont, A R ^b  

^a IFREMER   (France)

^b BANGOR UNIVERSITY   (United Kingdom)

Author keywords

AFLP; Blue mussel; Genetic linkage map; Mytilus edulis

Indexed keywords

ANIMAL; ARTICLE; CHROMOSOME MAP; COMPUTER PROGRAM; CONSENSUS SEQUENCE; FEMALE; GENETIC LINKAGE; GENETIC MARKER; GENETIC POLYMORPHISM; GENETICS; MALE; MUSSEL; NUCLEOTIDE SEQUENCE; SEX DIFFERENCE;

ANIMALS; BASE SEQUENCE; CHROMOSOME MAPPING; CONSENSUS SEQUENCE; FEMALE; GENETIC MARKERS; LINKAGE (GENETICS); MALE; MYTILUS EDULIS; POLYMORPHISM, GENETIC; SEX FACTORS; SOFTWARE;

MYTILUS EDULIS;

EID: 34547115668     PISSN: 02689146     EISSN: 13652052     Source Type: Journal    
DOI: 10.1111/j.1365-2052.2007.01611.x     Document Type: Article

References (47)

1. Agresti J.J., Seki S., Cnaani A., Poompuang S., Hallerman E.M., Umiel N., Hulata G., Gall G.A.E. May B. (2000) Breeding new strains of tilapia: development of an artificial center of origin and linkage map based on AFLP and microsatellite loci. Aquaculture 185, 43 56.
2. Beaumont A.R. (1994) Linkage studies in Mytilus edulis, the mussel. Heredity 72, 557 62.
3. Beaumont A.R., Beveridge C.M., Barnet E.A., Budd M.D. Smyth-Chamosa M. (1988) Genetics studies of laboratory reared Mytilus edulis. I. Genotype specific selection in relation to salinity. Heredity 61, 389 400.
4. Bierne N., Launey S., Naciri-Graven Y. Bonhomme F. (1998) Early effect of inbreeding as revealed by microsatellite analyses on Ostrea edulis larvae. Genetics 148, 1893 906.
5. Castiglioni P., Ajmone-Marsan P., Van Wijk R. Motto M. (1999) AFLP markers in a molecular linkage map of maize: codominant scoring and linkage group distribution. Theoretical and Applied Genetics 99, 425 31.
6. Chakravarti A., Lasher L.K. Reefer J.E. (1991) A maximum likelihood method for estimating genome length using genetic linkage data. Genetics 128, 175 82.
7. F.A.O. Fisheries Department (2002) Aquaculture production: quantities. Fishstart Plus Database, Rome.
8. Gosling E.M. (1992) The Mussel Mytilus : Ecology, Physiology, Genetics, and Culture. Elsevier, Amsterdam.
9. Grattapaglia D. Sederoff R. (1994) Genetic linkage maps of Eucalyptus grandis and Eucalyptus urophylla using a pseudo-testcross: mapping strategy and RAPD markers. Genetics 137, 1121 37.
10. Hubert S. Hedgecock D. (2004) Linkage maps of microsatellite DNA markers for the Pacific oyster Crassostrea gigas. Genetics 168, 351 62.
11. Insua A., Labat J.P. Thiriot-Quiévreux C. (1994) Comparative analysis of karyotypes and nucleolar organizer regions in different populations of Mytilus trossulus, Mytilus edulis and Mytilus galloprovincialis. Journal of Molluscan Studies 60, 359 60.
12. Johnson S.L., Gates M.A., Johnson M., Talbot W.S., Horne S., Baik K., Rude S., Wong J.R. Postlethwait J.H. (1996) Centromere-linkage analysis and consolidation of the zebrafish genetic map. Genetics 142, 1277 88.
13. Jones C.J., Edwards K.J., Castaglione S., Winfield M.O., Sala F., Van Der Wiel C., Vosman B., Matthes M., Daly A. Brettschneider R. (1998) Reproducibility testing of AFLPs by a network of European laboratories. In : Molecular Tools for Screening Biodiversity (Ed. by A. Karp, P.G. Isaac D.S. Ingram pp. 183 92. Chapman and Hall, London.
14. Kocher T.D., Lee W.J., Sobolewska H., Penman D. McAndrew B. (1998) A genetic linkage map of a cichlid fish, the tilapia (Oreochromis niloticus). Genetics 148, 1225 32.
15. Kosambi D.D. (1944) The estimation of map distances from recombination values. Annals of Eugenics 12, 172 5.
16. Lander E.S., Green P., Abrahamson J., Barlow A., Daly M.J., Lincoln S.E. Newburg L. (1987) mapmaker: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations. Genomics 1, 174 81.
17. Launey S. Hedgecock D. (2001) High genetic load in the Pacific oyster Crassostrea gigas. Genetics 159, 255 65.
18. Li L. Guo X. (2004) AFLP-based genetic linkage maps of the pacific oyster Crassostrea gigas Thunberg. Marine Biotechnology 6, 26 36.
19. Li Y., Byrne K., Miggiano E., Whan V., Moore S., Keys S., Crocos P., Preston N. Lehnert S. (2003) Genetic mapping of the kuruma prawn Penaeus japonicus using AFLP markers. Aquaculture 219, 143 56.
20. Li L., Xiang J., Liu X., Zhang Y., Dong B. Zhang X. (2005) Construction of AFLP-based genetic linkage map for Zhikong scallop, Chlamys farreri Jones et Preston and mapping of sex-linked markers. Aquaculture 245, 63 73.
21. Li Z., Li J., Wang Q., He Y. Liu P. (2006) AFLP-based genetic linkage map of marine shrimp Penaeus (Fenneropenaeus) chinensis. Aquaculture 261, 463 72.
22. Lincoln S.E. Lander E.S. (1992) Systematic detection of errors in genetic linkage data. Genomics 14, 604 10.
23. Liu Z.J. Cordes J.F. (2004) DNA marker technologies and their applications in aquaculture genetics. Aquaculture 238, 1 37.
24. Liu Z., Karsi A., Li P., Cao D. Dunham R. (2003) An AFLP-based genetic linkage map of channel catfish (Ictalurus punctatus) constructed by using an interspecific hybrid resource family. Genetics 165, 687 94.
25. Mallet A.L., Freeman K.R. Dickie L.M. (1986) The genetics of production characters in the blue mussel Mytilus edulis. I. A preliminary analysis. Aquaculture 57, 133 40.
26. McGoldrick D.J. Hedgecock D. (1997) Fixation, segregation and linkage of allozyme loci in inbred families of the Pacific oyster Crassostrea gigas (Thunberg): implications for the causes of inbreeding depression. Genetics 146, 321 34.
27. Moen T., Hoyheim B., Munck H. Gomez-Raya L. (2004) A linkage map of Atlantic salmon (Salmo salar) reveals an uncommonly large difference in recombination rate between the sexes. Animal Genetics 35, 81 92.
28. Nichols K.M., Young W.P., Danzmann R.G. et al. (2003) A consolidated linkage map for rainbow trout (Oncorhynchus mykiss). Animal Genetics 34, 102 15.
29. Presa P., Pérez M. Diz A.P. (2002) Polymorphic microsatellite markers for blue mussels (Mytilus spp.). Conservation Genetics 3, 441 3.
30. Sakamoto T., Danzmann R.G., Gharbi K. et al. (2000) A microsatellite linkage map of rainbow trout (Oncorhynchus mykiss) characterized by large sex-specific differences in recombination rates. Genetics 155, 1331 45.
31. Stromgren T. Nielsen M.V. (1989) Heritability of growth in larvae and juveniles of Mytilus edulis. Aquaculture 80, 1 6.
32. Sun X. Liang L. (2004) A genetic linkage map of common carp (Cyprinus carpio L.) and mapping of a locus associated with cold tolerance. Aquaculture 238, 165 72.
33. Tanksley S.D., Ganal M.W., Prince J.P. et al. (1992) High density molecular linkage maps of the tomato and potato genomes. Genetics 132, 1141 60.
34. Thiriot-Quiévreux C. (1984) Chromosome analysis of three species of Mytilus (Bivalvia: Mytilidae). Marine Biology Letter 5, 265 73.
35. Utting S.D. Spencer B.E. (1991) The Hatchery Culture of Bivalve Mollusc Larvae and Juveniles. Laboratory Leaflet Number 68. Ministry of Agriculture, Fisheries and Food Directorate of Fisheries Research, Lowestoft.
36. Van Ooijen J.W. (2006) JoinMap 4, Software for the Calculation of Genetic Linkage Maps in Experimental Populations. Wageningen, Netherlands, Kyazma, B.V.
37. Venier P., Pallavicini A., De Nardi B. Lanfranchi G. (2003) Towards a catalogue of genes transcribed in multiple tissues of Mytilus galloprovincialis. Gene 314, 29 40.
38. Venier P., De Pitta C., Pallavicini A., Marsano F., Varotto L., Romualdi C., Dondero F., Viarengo A. Lanfranchi G. (2006) Development of mussel mRNA profiling: can gene expression trends reveal coastal water pollution? Mutation Research 602, 121 34.
39. Voorrips R.E. (2002) MapChart: software for the graphical presentation of linkage maps and QTLs. The Journal of Heredity 93, 77 8.
40. Vos P., Hogers R., Bleeker M. et al. (1995) AFLP: a new technique for DNA fingerprinting. Nucleic Acids Research 23, 4407 14.
41. Wang S., Bao Z., Pan J., Zhang L., Yao B., Zhan A., Bi K. Zhang Q. (2004) AFLP linkage map of an intraspecific cross in Chlamys farreri. Journal of Shellfish Research 23, 491 9.
42. Wang L., Song L., Chang Y., Xu W., Ni D. Guo X. (2005) A preliminary genetic map of Zhikong scallop (Chlamys farreri Jones et Preston 1904). Aquaculture Research 36, 643 53.
43. Wilding C.S., Butlin R.K. Grahame J. (2001) Differential gene exchange between parapatric morphs of Littorina saxatilis detected using AFLP markers. Journal of Evolutionary Biology 14, 611 9.
44. Wilson K., Li Y., Whan V. et al. (2002) Genetic mapping of the black tiger shrimp Penaeus monodon with amplified fragment length polymorphism. Aquaculture 204, 297 309.
45. Young W.P., Wheeler P.A., Coryell V.H., Keim P. Thorgaard G.H. (1998) A detailed linkage map of rainbow trout produced using doubled haploids. Genetics 148, 839 50.
46. Yu Z. Guo X. (2003) Genetic linkage map of the eastern oyster Crassostrea virginica Gmelin. Biological Bulletin 204, 327 38.
47. Yu Z. Guo X. (2006) Identification and mapping of disease- resistance QTLs in the eastern oyster, Crassostrea virginica Gmelin. Aquaculture 254, 160 70.