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Volumn 41, Issue 2, 2007, Pages 153-160

The influence of stream sediment particle size on bacterial abundance and community composition

Author keywords

Benthos; FISH; Lotic ecosystem; Microorganisms; Particle sizes; Seasonal changes

Indexed keywords

ABUNDANCE; BACTERIUM; BENTHOS; COMMUNITY COMPOSITION; COMPARATIVE STUDY; FLUORESCENCE; FLUVIAL DEPOSIT; FRACTIONATION; LOTIC ENVIRONMENT; PARTICLE SIZE; RNA; SEASONAL VARIATION;

EID: 34447646715     PISSN: 13862588     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10452-006-9060-4     Document Type: Article
Times cited : (22)

References (25)
  • 1
    • 0025294528 scopus 로고
    • Fluorescent-oligonucleotide probing of whole cells for determinative, phylogenetic, and environmental studies in microbiology
    • Amann RI, Krumholz L, Stahl DA (1990) Fluorescent-oligonucleotide probing of whole cells for determinative, phylogenetic, and environmental studies in microbiology. Appl Environ Microbiol 56:1919-1925
    • (1990) Appl Environ Microbiol , vol.56 , pp. 1919-1925
    • Amann, R.I.1    Krumholz, L.2    Stahl, D.A.3
  • 2
    • 0028946084 scopus 로고
    • Phylogenetic identification and in situ detection of individual microbial cells without cultivation
    • Amann RI, Ludwig W, Schleifer K-H (1995) Phylogenetic identification and in situ detection of individual microbial cells without cultivation. Microbiol Rev 59:143-169
    • (1995) Microbiol Rev , vol.59 , pp. 143-169
    • Amann, R.I.1    Ludwig, W.2    Schleifer, K.-H.3
  • 3
    • 0038532917 scopus 로고    scopus 로고
    • Factors influencing the detection of bacterial cells using fluorescence in situ hybridization (FISH): A quantitative review of published reports
    • Bouvier T, del Giorgio PA (2003) Factors influencing the detection of bacterial cells using fluorescence in situ hybridization (FISH): a quantitative review of published reports. FEMS Microb Ecol 44:3-15
    • (2003) FEMS Microb Ecol , vol.44 , pp. 3-15
    • Bouvier, T.1    Del Giorgio, P.A.2
  • 4
    • 0027372825 scopus 로고
    • Use of a simplified cell blot technique and 16S rRNA-directed probes for identification of common environmental isolates
    • Braun-Howland EB, Vescio PA, Nierzwicki-Bauer SA (1993) Use of a simplified cell blot technique and 16S rRNA-directed probes for identification of common environmental isolates. Appl Environ Microbiol 59:3219-3224
    • (1993) Appl Environ Microbiol , vol.59 , pp. 3219-3224
    • Braun-Howland, E.B.1    Vescio, P.A.2    Nierzwicki-Bauer, S.A.3
  • 5
    • 0001681822 scopus 로고
    • The relative contribution of benthic and suspended bacteria to system biomass, production, and metabolism in a low-gradient blackwater river
    • Edwards RT, Meyer JL, Findlay SG (1990) The relative contribution of benthic and suspended bacteria to system biomass, production, and metabolism in a low-gradient blackwater river. J N Am Benthol Soc 9:216-228
    • (1990) J N Am Benthol Soc , vol.9 , pp. 216-228
    • Edwards, R.T.1    Meyer, J.L.2    Findlay, S.G.3
  • 6
    • 0033305865 scopus 로고    scopus 로고
    • Spatial and temporal heterogeneity of an epilithic streambed community in relation to the habitat templet
    • Eisenmann H, Burgherr P, Meyer EI (1999) Spatial and temporal heterogeneity of an epilithic streambed community in relation to the habitat templet. Can J Fish Aquat Sci 56:1452-1460
    • (1999) Can J Fish Aquat Sci , vol.56 , pp. 1452-1460
    • Eisenmann, H.1    Burgherr, P.2    Meyer, E.I.3
  • 7
    • 23744490053 scopus 로고    scopus 로고
    • A comparison of benthic bacterial community composition among nine streams
    • Gao X, Olapade O, Leff LG (2005) A comparison of benthic bacterial community composition among nine streams. Aquat Microb Ecol 40:51-60
    • (2005) Aquat Microb Ecol , vol.40 , pp. 51-60
    • Gao, X.1    Olapade, O.2    Leff, L.G.3
  • 8
    • 0032413043 scopus 로고    scopus 로고
    • The impact of flash floods on microbial distribution and biogeochemistry in the parafluvial zone of a desert stream
    • Holmes RM, Fisher SG, Grimm NB, Harper RJ (1998) The impact of flash floods on microbial distribution and biogeochemistry in the parafluvial zone of a desert stream. Freshw Biol 40:641-654
    • (1998) Freshw Biol , vol.40 , pp. 641-654
    • Holmes, R.M.1    Fisher, S.G.2    Grimm, N.B.3    Harper, R.J.4
  • 9
    • 0030817423 scopus 로고    scopus 로고
    • The response of three bacterial populations to pollution in a stream
    • Lemke MJ, Brown BJ, Leff LG (1997) The response of three bacterial populations to pollution in a stream. Microb Ecol 34:224-231
    • (1997) Microb Ecol , vol.34 , pp. 224-231
    • Lemke, M.J.1    Brown, B.J.2    Leff, L.G.3
  • 10
    • 0038513520 scopus 로고    scopus 로고
    • Temporal changes in the bacterioplankton of a Northeast Ohio (USA) River
    • Liu J, Leff LG (2003) Temporal changes in the bacterioplankton of a Northeast Ohio (USA) River. Hydrobiologia 489:151-159
    • (2003) Hydrobiologia , vol.489 , pp. 151-159
    • Liu, J.1    Leff, L.G.2
  • 11
    • 0033061147 scopus 로고    scopus 로고
    • Phylogenetic composition, spatial structure, and dynamics of lotic bacterial biofilms investigated by fluorescent in situ hybridization and confocal laser scanning microscopy
    • Manz W, Wendt-Potthoff K, Neu TR, Szewzyk U, Lawrence JR (1999) Phylogenetic composition, spatial structure, and dynamics of lotic bacterial biofilms investigated by fluorescent in situ hybridization and confocal laser scanning microscopy. Microbiol Ecol 37:225-237
    • (1999) Microbiol Ecol , vol.37 , pp. 225-237
    • Manz, W.1    Wendt-Potthoff, K.2    Neu, T.R.3    Szewzyk, U.4    Lawrence, J.R.5
  • 12
    • 0035665967 scopus 로고    scopus 로고
    • Bacterial production in different streambed habitats of an upland stream: Sandy versus coarse gravelly sediments
    • Marxsen J (2001) Bacterial production in different streambed habitats of an upland stream: sandy versus coarse gravelly sediments. Arch Hydrobiol 152:543-565
    • (2001) Arch Hydrobiol , vol.152 , pp. 543-565
    • Marxsen, J.1
  • 13
    • 0038607494 scopus 로고    scopus 로고
    • Underestimation of bacterial numbers in starvation-survival mode using the nucleic acid stain DAPI
    • McNamara CJ, Lemke MJ, Leff LG (2003) Underestimation of bacterial numbers in starvation-survival mode using the nucleic acid stain DAPI. Arch Hydrobiol 157:309-319
    • (2003) Arch Hydrobiol , vol.157 , pp. 309-319
    • McNamara, C.J.1    Lemke, M.J.2    Leff, L.G.3
  • 14
    • 9644280224 scopus 로고    scopus 로고
    • Response of biofilm bacteria to dissolved organic matter from decomposing maple leaves
    • McNamara CJ, Leff LG (2004a). Response of biofilm bacteria to dissolved organic matter from decomposing maple leaves. Microb Ecol 48:324-330
    • (2004) Microb Ecol , vol.48 , pp. 324-330
    • McNamara, C.J.1    Leff, L.G.2
  • 15
    • 9644268012 scopus 로고    scopus 로고
    • Bacterial community composition in biofilms on decomposing leaves in a Northeast Ohio stream
    • McNamara CJ, Leff L (2004b) Bacterial community composition in biofilms on decomposing leaves in a Northeast Ohio stream. J N Am Benthol Soc 23:677-685
    • (2004) J N Am Benthol Soc , vol.23 , pp. 677-685
    • McNamara, C.J.1    Leff, L.2
  • 16
    • 9644300800 scopus 로고    scopus 로고
    • Seasonal dynamics of bacterial assemblages in epilithic biofilms in a Northeast Ohio stream
    • Olapade OA, Leff LG (2004) Seasonal dynamics of bacterial assemblages in epilithic biofilms in a Northeast Ohio stream. J N Am Benthol Soc 23:686-700
    • (2004) J N Am Benthol Soc , vol.23 , pp. 686-700
    • Olapade, O.A.1    Leff, L.G.2
  • 17
    • 23744498748 scopus 로고    scopus 로고
    • Abundance of three bacterial populations in selected streams
    • Olapade OA, Gao X, Leff LG (2005) Abundance of three bacterial populations in selected streams. Microb Ecol 49:461-467
    • (2005) Microb Ecol , vol.49 , pp. 461-467
    • Olapade, O.A.1    Gao, X.2    Leff, L.G.3
  • 18
    • 84986870589 scopus 로고
    • The use of DAPI for identifying and counting aquatic microflora
    • Porter KG, Feig YS (1980) The use of DAPI for identifying and counting aquatic microflora. Limnol Oceanogr 25:943-948
    • (1980) Limnol Oceanogr , vol.25 , pp. 943-948
    • Porter, K.G.1    Feig, Y.S.2
  • 19
    • 0027264175 scopus 로고
    • Use of rRNA fluorescence in situ hybridization for measuring the activity of single cells in young and established biofilms
    • Poulsen LK, Ballard G, Stahl DA (1993) Use of rRNA fluorescence in situ hybridization for measuring the activity of single cells in young and established biofilms. Appl Environ Microbiol 59:1354-1360
    • (1993) Appl Environ Microbiol , vol.59 , pp. 1354-1360
    • Poulsen, L.K.1    Ballard, G.2    Stahl, D.A.3
  • 20
    • 0035658847 scopus 로고    scopus 로고
    • Structure and activity of rock and sand biofilms in a Mediterranean stream
    • Romani AM, Sabater S (2001) Structure and activity of rock and sand biofilms in a Mediterranean stream. Ecology 82:3232-3245
    • (2001) Ecology , vol.82 , pp. 3232-3245
    • Romani, A.M.1    Sabater, S.2
  • 21
    • 0025092974 scopus 로고
    • Environmental application of nucleic acid hybridization
    • Saylor GS, Layton AC (1990) Environmental application of nucleic acid hybridization. Annu Rev Microbiol 44:625-648
    • (1990) Annu Rev Microbiol , vol.44 , pp. 625-648
    • Saylor, G.S.1    Layton, A.C.2
  • 22
    • 0028166274 scopus 로고
    • Grazing rates on bacteria: The significance of methodology and ecological factors
    • Vaque D, Gasol JM, Marrase C (1994) Grazing rates on bacteria: the significance of methodology and ecological factors. Mar Ecol Prog Ser 109:263-274
    • (1994) Mar Ecol Prog Ser , vol.109 , pp. 263-274
    • Vaque, D.1    Gasol, J.M.2    Marrase, C.3
  • 23
    • 0027299353 scopus 로고
    • Probing activated sludge with oligonucleotides specific for proteobacteria: Inadequacy of culture-dependent methods for describing microbial community structure
    • Wagner M, Amann RI, Lemmer H, Schleifer KH (1993) Probing activated sludge with oligonucleotides specific for proteobacteria: inadequacy of culture-dependent methods for describing microbial community structure. Appl Environ Microbiol 59:1520-1525
    • (1993) Appl Environ Microbiol , vol.59 , pp. 1520-1525
    • Wagner, M.1    Amann, R.I.2    Lemmer, H.3    Schleifer, K.H.4
  • 24
    • 0002804603 scopus 로고
    • The four-dimensional nature of lotic ecosystems
    • Ward JV (1989) The four-dimensional nature of lotic ecosystems. J N Am Benthol Soc 8:2-8
    • (1989) J N Am Benthol Soc , vol.8 , pp. 2-8
    • Ward, J.V.1
  • 25
    • 4043136051 scopus 로고    scopus 로고
    • Longitudinal changes in the benthic bacterial community of the Mahoning River (Ohio, USA)
    • Xu P, Leff LG (2004) Longitudinal changes in the benthic bacterial community of the Mahoning River (Ohio, USA). Hydrobiologia 522:329-335
    • (2004) Hydrobiologia , vol.522 , pp. 329-335
    • Xu, P.1    Leff, L.G.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.