-
1
-
-
0345119182
-
Neural tissue in ascidian embryos is induced by FGF9/16/20, acting via a combination of maternal GATA and Ets transcription factors
-
Bertrand V, Hudson C, Caillol D, Popovici C, Lemaire P. 2003. Neural tissue in ascidian embryos is induced by FGF9/16/20, acting via a combination of maternal GATA and Ets transcription factors. Cell 115:615-627.
-
(2003)
Cell
, vol.115
, pp. 615-627
-
-
Bertrand, V.1
Hudson, C.2
Caillol, D.3
Popovici, C.4
Lemaire, P.5
-
2
-
-
33750585486
-
Deuterostome phylogeny reveals monophyletic chordates and the new phylum Xenoturbellida
-
Bourlat SJ, Juliusdottir T, Lowe CJ, Freeman R, Aronowicz J, Kirschner M, Lander ES, Thorndyke M, Nakano H, Kohn AB, Heyland A, Moroz LL, Copley RR, Telford MJ. 2006. Deuterostome phylogeny reveals monophyletic chordates and the new phylum Xenoturbellida. Nature 444:85-88.
-
(2006)
Nature
, vol.444
, pp. 85-88
-
-
Bourlat, S.J.1
Juliusdottir, T.2
Lowe, C.J.3
Freeman, R.4
Aronowicz, J.5
Kirschner, M.6
Lander, E.S.7
Thorndyke, M.8
Nakano, H.9
Kohn, A.B.10
Heyland, A.11
Moroz, L.L.12
Copley, R.R.13
Telford, M.J.14
-
3
-
-
14844302828
-
Identification of novel genes affecting mesoderm formation and morphogenesis through an enhanced large scale functional screen in Xenopus
-
Chen JA, Voigt J, Gilchrist M, Papalopulu N, Amaya E. 2005. Identification of novel genes affecting mesoderm formation and morphogenesis through an enhanced large scale functional screen in Xenopus. Mech Dev 122:307-331.
-
(2005)
Mech Dev
, vol.122
, pp. 307-331
-
-
Chen, J.A.1
Voigt, J.2
Gilchrist, M.3
Papalopulu, N.4
Amaya, E.5
-
4
-
-
0032385050
-
Isolation and characterization of cDNA clones for epidermis-specific and muscle-specific genes in Ciona savignyi embryos
-
Chiba S, Satou Y, Nishikata T, Satoh N. 1998. Isolation and characterization of cDNA clones for epidermis-specific and muscle-specific genes in Ciona savignyi embryos. Zoolog Sci 15:239-246.
-
(1998)
Zoolog Sci
, vol.15
, pp. 239-246
-
-
Chiba, S.1
Satou, Y.2
Nishikata, T.3
Satoh, N.4
-
5
-
-
0035823033
-
The ascidian as a model organism in developmental and evolutionary biology
-
Corbo JC, Di Gregorio A, Levine M. 2001. The ascidian as a model organism in developmental and evolutionary biology. Cell 106:535-538.
-
(2001)
Cell
, vol.106
, pp. 535-538
-
-
Corbo, J.C.1
Di Gregorio, A.2
Levine, M.3
-
6
-
-
2242464840
-
-
Dehal P, Satou Y, Campbell RK, Chapman J, Degnan B, De Tomaso A, Davidson B, Di Gregorio A, Gelpke M, Goodstein DM, Harafuji N, Hastings KE, Ho I, Hotta K, Huang W, Kawashima T, Lemaire P, Martinez D, Meinertzhagen LA, Necula S, Nonaka M, Putnam N, Rash S, Saiga H, Satake M, Terry A, Yamada L, Wang HG, Awazu S, Azumi K, Boore J, Branno M, Chin-Bow S, DeSantis R, Doyle S, Francino P, Keys DN, Haga S, Hayashi H, Hino K, Imai KS, Inaba K, Kano S, Kobayashi K, Kobayashi M, Lee BI, Makabe KW, Manohar C, Matassi G, Medina M, Mochizuki Y, Mount S, Morishita T, Miura S, Nakayama A, Nishizaka S, Nomoto H, Ohta F, Oishi K, Rigoutsos I, Sano M, Sasaki A, Sasakura Y, Shoguchi E, Shin-i T, Spagnuolo A, Stainier D, Suzuki MM, Tassy O, Takatori N, Tokuoka M, Yagi K, Yoshizaki F, Wada S, Zhang C, Hyatt PD, Larimer F, Detter C, Doggett N, Glavina T, Hawkins T, Richardson P, Lucas S, Kohara Y, Levine M, Satoh N, Rokhsar DS. 2002. The draft genome of Ciona intestinalis: insights into chordate and
-
Dehal P, Satou Y, Campbell RK, Chapman J, Degnan B, De Tomaso A, Davidson B, Di Gregorio A, Gelpke M, Goodstein DM, Harafuji N, Hastings KE, Ho I, Hotta K, Huang W, Kawashima T, Lemaire P, Martinez D, Meinertzhagen LA, Necula S, Nonaka M, Putnam N, Rash S, Saiga H, Satake M, Terry A, Yamada L, Wang HG, Awazu S, Azumi K, Boore J, Branno M, Chin-Bow S, DeSantis R, Doyle S, Francino P, Keys DN, Haga S, Hayashi H, Hino K, Imai KS, Inaba K, Kano S, Kobayashi K, Kobayashi M, Lee BI, Makabe KW, Manohar C, Matassi G, Medina M, Mochizuki Y, Mount S, Morishita T, Miura S, Nakayama A, Nishizaka S, Nomoto H, Ohta F, Oishi K, Rigoutsos I, Sano M, Sasaki A, Sasakura Y, Shoguchi E, Shin-i T, Spagnuolo A, Stainier D, Suzuki MM, Tassy O, Takatori N, Tokuoka M, Yagi K, Yoshizaki F, Wada S, Zhang C, Hyatt PD, Larimer F, Detter C, Doggett N, Glavina T, Hawkins T, Richardson P, Lucas S, Kohara Y, Levine M, Satoh N, Rokhsar DS. 2002. The draft genome of Ciona intestinalis: insights into chordate and vertebrate origins. Science 298:2157-2167.
-
-
-
-
7
-
-
33644536713
-
Tunicates and not cephalochordates are the closest living relatives of vertebrates
-
Delsuc F, Brinkmann H, Chourrout D, Philippe H. 2006. Tunicates and not cephalochordates are the closest living relatives of vertebrates. Nature 439:965-968.
-
(2006)
Nature
, vol.439
, pp. 965-968
-
-
Delsuc, F.1
Brinkmann, H.2
Chourrout, D.3
Philippe, H.4
-
8
-
-
23944463968
-
Functional analysis of human hematopoietic stem cell gene expression using zebrafish
-
Eckfeldt CE, Mendenhall EM, Flynn CM, Wang TF, Pickart MA, Grindle SM, Ekker SC, Verfaillie CM. 2005. Functional analysis of human hematopoietic stem cell gene expression using zebrafish. PLoS Biol 3:e254.
-
(2005)
PLoS Biol
, vol.3
-
-
Eckfeldt, C.E.1
Mendenhall, E.M.2
Flynn, C.M.3
Wang, T.F.4
Pickart, M.A.5
Grindle, S.M.6
Ekker, S.C.7
Verfaillie, C.M.8
-
9
-
-
28244460755
-
Uncover genetic interactions in Caenorhabditis elegans by RNA interference
-
Fortunato A, Fraser AG. 2005. Uncover genetic interactions in Caenorhabditis elegans by RNA interference. Biosci Rep 25:299-307.
-
(2005)
Biosci Rep
, vol.25
, pp. 299-307
-
-
Fortunato, A.1
Fraser, A.G.2
-
10
-
-
33644829357
-
Ci-Rga, a gene encoding an MtN3/saliva family transmembrane protein, is essential for tissue differentiation during embryogenesis of the ascidian Ciona intestinalis
-
Hamada M, Wada S, Kobayashi K, Satoh N. 2005. Ci-Rga, a gene encoding an MtN3/saliva family transmembrane protein, is essential for tissue differentiation during embryogenesis of the ascidian Ciona intestinalis. Differentiation 73:364-376.
-
(2005)
Differentiation
, vol.73
, pp. 364-376
-
-
Hamada, M.1
Wada, S.2
Kobayashi, K.3
Satoh, N.4
-
11
-
-
0037086052
-
Morpholino oligos: Making sense of antisense?
-
Heasman J. 2002. Morpholino oligos: making sense of antisense? Dev Biol 243:209-214.
-
(2002)
Dev Biol
, vol.243
, pp. 209-214
-
-
Heasman, J.1
-
12
-
-
0141631539
-
Isolation and characterization of β-catenin downstream genes in early embryos of the ascidian Ciona savignyi
-
Imai KS. 2003. Isolation and characterization of β-catenin downstream genes in early embryos of the ascidian Ciona savignyi. Differentiation 71:346-360.
-
(2003)
Differentiation
, vol.71
, pp. 346-360
-
-
Imai, K.S.1
-
13
-
-
0033853018
-
β-eatenin mediates the specification of endoderm cells in ascidian embryos
-
Imai K, Takada N, Satoh N, Satou Y. 2000. β-eatenin mediates the specification of endoderm cells in ascidian embryos. Development 127:3009-3020.
-
(2000)
Development
, vol.127
, pp. 3009-3020
-
-
Imai, K.1
Takada, N.2
Satoh, N.3
Satou, Y.4
-
14
-
-
0036339985
-
Early embryonic expression of FGF4/6/9 gene and its role in the induction of mesenchyme and notochord in Ciona savignyi embryos
-
Imai KS, Satoh N, Satou Y. 2002. Early embryonic expression of FGF4/6/9 gene and its role in the induction of mesenchyme and notochord in Ciona savignyi embryos. Development 129:1729-1738.
-
(2002)
Development
, vol.129
, pp. 1729-1738
-
-
Imai, K.S.1
Satoh, N.2
Satou, Y.3
-
15
-
-
4544303883
-
Gene expression profiles of transcription factors and signaling molecules in the ascidian embryo: Towards a comprehensive understanding of gene networks
-
Imai KS, Hino K, Yagi K, Satoh N, Satou Y. 2004. Gene expression profiles of transcription factors and signaling molecules in the ascidian embryo: towards a comprehensive understanding of gene networks. Development 131:4047-4058.
-
(2004)
Development
, vol.131
, pp. 4047-4058
-
-
Imai, K.S.1
Hino, K.2
Yagi, K.3
Satoh, N.4
Satou, Y.5
-
16
-
-
33744458441
-
Regulatory blueprint for a chordate embryo
-
Imai KS, Levine M, Satoh N, Satou Y. 2006. Regulatory blueprint for a chordate embryo. Science 312:1183-1187.
-
(2006)
Science
, vol.312
, pp. 1183-1187
-
-
Imai, K.S.1
Levine, M.2
Satoh, N.3
Satou, Y.4
-
17
-
-
4644231652
-
Genome-wide RNAi as a route to gene function in Drosophila
-
Kuttenkeuler D, Boutros M. 2004. Genome-wide RNAi as a route to gene function in Drosophila. Brief Funct Genomic Proteomic 3:168-176.
-
(2004)
Brief Funct Genomic Proteomic
, vol.3
, pp. 168-176
-
-
Kuttenkeuler, D.1
Boutros, M.2
-
18
-
-
0032870876
-
EST analysis of gene expression in early cleavage-stage sea urchin embryos
-
Lee YH, Huang GM, Cameron RA, Graham G, Davidson EH, Hood L, Britten RJ. 1999. EST analysis of gene expression in early cleavage-stage sea urchin embryos. Development 126:3857-3867.
-
(1999)
Development
, vol.126
, pp. 3857-3867
-
-
Lee, Y.H.1
Huang, G.M.2
Cameron, R.A.3
Graham, G.4
Davidson, E.H.5
Hood, L.6
Britten, R.J.7
-
19
-
-
33645939940
-
Systematic analysis of embryonic expression profiles of zinc finger genes in Ciona intestinalis
-
Miwata K, Chiba T, Horii R, Yamada L, Kubo A, Miyamura D, Satoh N, Satou Y. 2006. Systematic analysis of embryonic expression profiles of zinc finger genes in Ciona intestinalis. Dev Biol 292:546-554.
-
(2006)
Dev Biol
, vol.292
, pp. 546-554
-
-
Miwata, K.1
Chiba, T.2
Horii, R.3
Yamada, L.4
Kubo, A.5
Miyamura, D.6
Satoh, N.7
Satou, Y.8
-
20
-
-
0035825635
-
macho-1 encodes a localized mRNA in ascidian eggs that specifies muscle fate during embryogenesis
-
Nishida H, Sawada K. 2001. macho-1 encodes a localized mRNA in ascidian eggs that specifies muscle fate during embryogenesis. Nature 409:724-729.
-
(2001)
Nature
, vol.409
, pp. 724-729
-
-
Nishida, H.1
Sawada, K.2
-
21
-
-
0035996797
-
Patterning the marginal zone of early ascidian embryos: Localized material mRNA and inductive interactions
-
Nishida H. 2002. Patterning the marginal zone of early ascidian embryos: localized material mRNA and inductive interactions. BioEssays 24:613-624.
-
(2002)
BioEssays
, vol.24
, pp. 613-624
-
-
Nishida, H.1
-
22
-
-
0035886719
-
Profiles of maternally expressed genes in fertilized eggs of Ciona intestinalis
-
Nishikata T, Yamada L, Mochizuki Y, Satou Y, Shin-i T, Kohara Y, Satoh N. 2001. Profiles of maternally expressed genes in fertilized eggs of Ciona intestinalis. Dev Biol 238:315-331.
-
(2001)
Dev Biol
, vol.238
, pp. 315-331
-
-
Nishikata, T.1
Yamada, L.2
Mochizuki, Y.3
Satou, Y.4
Shin-i, T.5
Kohara, Y.6
Satoh, N.7
-
23
-
-
33751359804
-
Defining synphenotype groups in Xenopus tropicalis by use of antisense morpholino oligonucleotides
-
Rana AA, Collart C, Gilchrist MJ, Smith JC. 2006. Defining synphenotype groups in Xenopus tropicalis by use of antisense morpholino oligonucleotides. PLoS Genet 2:e193.
-
(2006)
PLoS Genet
, vol.2
-
-
Rana, A.A.1
Collart, C.2
Gilchrist, M.J.3
Smith, J.C.4
-
24
-
-
0035724599
-
Ascidian embryos as a model system to analyze expression and function of developmental genes
-
Satoh N. 2001. Ascidian embryos as a model system to analyze expression and function of developmental genes. Differentiation 68:1-12.
-
(2001)
Differentiation
, vol.68
, pp. 1-12
-
-
Satoh, N.1
-
25
-
-
0037379619
-
The ascidian tadpole larva: Comparative molecular development and genomics
-
Satoh N. 2003. The ascidian tadpole larva: comparative molecular development and genomics. Nat Rev Genet 4:285-295.
-
(2003)
Nat Rev Genet
, vol.4
, pp. 285-295
-
-
Satoh, N.1
-
26
-
-
0037677689
-
Ciona intestinalis: An emerging model for whole-genome analyses
-
Satoh N, Satou Y, Davidson B, Levine M. 2003. Ciona intestinalis: an emerging model for whole-genome analyses. Trends Genet 19:376-381.
-
(2003)
Trends Genet
, vol.19
, pp. 376-381
-
-
Satoh, N.1
Satou, Y.2
Davidson, B.3
Levine, M.4
-
27
-
-
0034898465
-
Action of morpholinos in Ciona embryos
-
Satou Y, Imai KS, Satoh N. 2001a. Action of morpholinos in Ciona embryos. Genesis 30:103-106.
-
(2001)
Genesis
, vol.30
, pp. 103-106
-
-
Satou, Y.1
Imai, K.S.2
Satoh, N.3
-
28
-
-
0034883425
-
Gene expression profiles in Ciona intestinalis tailbud embryos
-
Satou Y, Takatori N, Yamada L, Mochizuki Y, Hamaguchi M, Ishikawa H, Chiba S, Imai K, Kano S, Murakami SD, Nakayama A, Nishino A, Sasakura Y, Satoh G, Shimotori T, Shin-I T, Shoguchi E, Suzuki MM, Takada N, Utsumi N, Yoshida N, Saiga H, Kohara Y, Satoh N. 2001b. Gene expression profiles in Ciona intestinalis tailbud embryos. Development 128:2893-2904.
-
(2001)
Development
, vol.128
, pp. 2893-2904
-
-
Satou, Y.1
Takatori, N.2
Yamada, L.3
Mochizuki, Y.4
Hamaguchi, M.5
Ishikawa, H.6
Chiba, S.7
Imai, K.8
Kano, S.9
Murakami, S.D.10
Nakayama, A.11
Nishino, A.12
Sasakura, Y.13
Satoh, G.14
Shimotori, T.15
Shin-I, T.16
Shoguchi, E.17
Suzuki, M.M.18
Takada, N.19
Utsumi, N.20
Yoshida, N.21
Saiga, H.22
Kohara, Y.23
Satoh, N.24
more..
-
29
-
-
0037012570
-
Ciona intestinalis cDNA projects: Expressed sequence tag analyses and gene expression profiles during embryogenesis
-
Satou Y, Takatori N, Fujiwara S, Nishikata T, Saiga H, Kusakabe T, Shin-i T, Kohara Y, Satoh N. 2002a. Ciona intestinalis cDNA projects: expressed sequence tag analyses and gene expression profiles during embryogenesis. Gene 287:83-96.
-
(2002)
Gene
, vol.287
, pp. 83-96
-
-
Satou, Y.1
Takatori, N.2
Fujiwara, S.3
Nishikata, T.4
Saiga, H.5
Kusakabe, T.6
Shin-i, T.7
Kohara, Y.8
Satoh, N.9
-
30
-
-
0036687895
-
A cDNA resource from the basal chordate Ciona intestinalis
-
Satou Y, Yamada L, Mochizuki Y, Takatori N, Kawashima T, Sasaki A, Hamaguchi M, Awazu S, Yagi K, Sasakura Y, Nakayama A, Ishikawa H, Inaba K, Satoh N. 2002b. A cDNA resource from the basal chordate Ciona intestinalis. Genesis 33:153-154.
-
(2002)
Genesis
, vol.33
, pp. 153-154
-
-
Satou, Y.1
Yamada, L.2
Mochizuki, Y.3
Takatori, N.4
Kawashima, T.5
Sasaki, A.6
Hamaguchi, M.7
Awazu, S.8
Yagi, K.9
Sasakura, Y.10
Nakayama, A.11
Ishikawa, H.12
Inaba, K.13
Satoh, N.14
-
31
-
-
0037626990
-
Large scale EST analyses in Ciona internalis: Its application as Northern blot analyses
-
Satou Y, Kawashima T, Kohara Y, Satoh N. 2003. Large scale EST analyses in Ciona internalis: Its application as Northern blot analyses. Dev Genes Evol 213:314-318.
-
(2003)
Dev Genes Evol
, vol.213
, pp. 314-318
-
-
Satou, Y.1
Kawashima, T.2
Kohara, Y.3
Satoh, N.4
-
32
-
-
25444448272
-
An integrated database of the ascidian, Ciona intestinalis: Towards functional genomics
-
Satou Y, Kawashima T, Shoguehi E, Nakayama A, Satoh N. 2005. An integrated database of the ascidian, Ciona intestinalis: towards functional genomics. Zoolog Sci 22:837-843.
-
(2005)
Zoolog Sci
, vol.22
, pp. 837-843
-
-
Satou, Y.1
Kawashima, T.2
Shoguehi, E.3
Nakayama, A.4
Satoh, N.5
-
33
-
-
1842790673
-
Inositol deacylation of glycosylphosphatidylinositol-anchored proteins is mediated by mammalian PGAP1 and yeast Bst1p
-
Tanaka S, Maeda Y, Tashima Y, Kinoshita T. 2004. Inositol deacylation of glycosylphosphatidylinositol-anchored proteins is mediated by mammalian PGAP1 and yeast Bst1p. J Biol Chem 279:14256-14263.
-
(2004)
J Biol Chem
, vol.279
, pp. 14256-14263
-
-
Tanaka, S.1
Maeda, Y.2
Tashima, Y.3
Kinoshita, T.4
-
34
-
-
4444275193
-
Three distinct lineages of mesenchymal cells in Ciona intestinalis embryos demonstrated by specific gene expression
-
Tokuoka M, Imai KS, Satou Y, Satoh N. 2004. Three distinct lineages of mesenchymal cells in Ciona intestinalis embryos demonstrated by specific gene expression Dev Biol 274:211-224.
-
(2004)
Dev Biol
, vol.274
, pp. 211-224
-
-
Tokuoka, M.1
Imai, K.S.2
Satou, Y.3
Satoh, N.4
-
35
-
-
33644843542
-
A genomewide analysis of genes for the heat shock protein 70 chaperone system in the ascidian Ciona intestinalis
-
Wada S, Hamada M, Satoh N. 2006. A genomewide analysis of genes for the heat shock protein 70 chaperone system in the ascidian Ciona intestinalis. Cell Stress Chaperones 11:23-33.
-
(2006)
Cell Stress Chaperones
, vol.11
, pp. 23-33
-
-
Wada, S.1
Hamada, M.2
Satoh, N.3
-
36
-
-
0034844450
-
Isolation of an early neural maker gene abundantly expressed in the nervous system of the ascidian, Halocynthia roretzi
-
Yagi K, Makabe KW. 2001. Isolation of an early neural maker gene abundantly expressed in the nervous system of the ascidian, Halocynthia roretzi. Dev Genes Evol 211:49-53.
-
(2001)
Dev Genes Evol
, vol.211
, pp. 49-53
-
-
Yagi, K.1
Makabe, K.W.2
-
37
-
-
4644366937
-
Identification of downstream genes of the ascidian muscle determinant gene Ci-macho1
-
Yagi K, Satoh N, Satou Y. 2004. Identification of downstream genes of the ascidian muscle determinant gene Ci-macho1. Dev Biol. 274:478-489.
-
(2004)
Dev Biol
, vol.274
, pp. 478-489
-
-
Yagi, K.1
Satoh, N.2
Satou, Y.3
-
38
-
-
33746902050
-
Embryonic expression profiles and conserved localization mechanisms of pem/postplasmic mRNAs of two species of ascidian, ciona intestinalis and Ciona savignyi
-
Yamada L. 2006. Embryonic expression profiles and conserved localization mechanisms of pem/postplasmic mRNAs of two species of ascidian, ciona intestinalis and Ciona savignyi. Dev Biol 296:524-536.
-
(2006)
Dev Biol
, vol.296
, pp. 524-536
-
-
Yamada, L.1
-
39
-
-
0347135657
-
Morpholino-based gene knockdown screen of novel genes with developmental function in Ciona intestinalis
-
Yamada L, Shoguchi E, Wada S, Kobayashi K, Mochizuki Y, Satou Y, Satoh N. 2003. Morpholino-based gene knockdown screen of novel genes with developmental function in Ciona intestinalis. Development 130:6485-6495.
-
(2003)
Development
, vol.130
, pp. 6485-6495
-
-
Yamada, L.1
Shoguchi, E.2
Wada, S.3
Kobayashi, K.4
Mochizuki, Y.5
Satou, Y.6
Satoh, N.7
-
40
-
-
33846215631
-
FGF8/17/18 functions together with FGF9/16/20 during formation of the notochord in Ciona embryos
-
Yasuo H, Hudson C. 2007. FGF8/17/18 functions together with FGF9/16/20 during formation of the notochord in Ciona embryos. Dev Biol 302:92-103.
-
(2007)
Dev Biol
, vol.302
, pp. 92-103
-
-
Yasuo, H.1
Hudson, C.2
|