Gel immobilization of acrylamide-modified single-stranded DNA template for pyrosequencing

Electrophoresis

Volumn 28, Issue 12, 2007, Pages 1903-1912

  Xiao, Pengfeng ^a,b   Huang, Huan ^b   Zhou, Guohua ^b   Lu, Zuhong ^a  

^a Southeast University   (China)

^b HUADONG RESEARCH INSTITUTE FOR MEDICINE AND BIOTECHNICS   (China)

Author keywords

Acrylamide modified nucleic acids; Gel immobilization; Pyrosequencing; ssDNA

Indexed keywords

ACRYLIC MONOMERS; AMIDES; DNA; PHOTOMULTIPLIERS; POLYMERASE CHAIN REACTION; SODIUM HYDROXIDE;

ACRYLAMIDE MONOMERS; ACRYLAMIDE-MODIFIED NUCLEIC ACID; ACRYLAMIDES; DNA-TEMPLATE; GEL IMMOBILIZATION; PCR PRODUCTS; POLYACRYLAMIDE GELS; PYROSEQUENCING; SSDNA; TWO-STEP PROCESS;

ELECTROPHORESIS;

ACRYLAMIDE; ALKALI; DEOXYRIBONUCLEOTIDE; DNA POLYMERASE; ENZYME; MONOMER; POLYACRYLAMIDE; PYROPHOSPHATE; REAGENT; SINGLE STRANDED DNA; SODIUM HYDROXIDE;

ARTICLE; CONTROLLED STUDY; DNA MICROARRAY; DNA SEQUENCE; DNA TEMPLATE; ELECTROPHORESIS; GEL; GENOTYPE; HIGH THROUGHPUT SCREENING; IMMOBILIZATION; POLYMERASE CHAIN REACTION; POLYMERIZATION; POROSITY;

EID: 34447292144     PISSN: 01730835     EISSN: 15222683     Source Type: Journal    
DOI: 10.1002/elps.200600794     Document Type: Article

References (36)

1. Ronaghi, M., Uhlen, M., Nyren, P., Science 1998, 281, 363-365.
2. Nyren, P., Karamohamed, S., Ronaghi, M., Anal. Biochem. 1997, 244, 367-373.
3. Ronaghi, M., Karamohamed, S., Pettersson, B., Uhlen, M., Nyren, P., Anal. Biochem. 1996, 242, 84-89.
4. Nyren, P., J. Biolumin. Chemilumin. 1994, 9, 29-34.
5. Alderborn, A., Kristofferson, A., Hammerling, U., Genome Res. 2000, 10, 1249-1258.
6. Nourizad, N., Gharizadeh, B., Nyren, P., Electrophoresis 2003, 24, 1712-1715.
7. Gharizadeh, B., Ohlin, A., Molling, P., Backman, A. et al., Mol. Cell. Probes 2003, 17, 203-210.
8. Margulies, M., Egholm, M., Altman, W. E., Attiya, S. et al., Nature 2005, 437, 376-380.
9. Nordstrom, T., Nourizad, K., Ronaghi, M., Nyren, P., Anal. Biochem. 2000, 282, 186-193.
10. Pacey-Miller, T., Henry, R., Anal. Biochem. 2003, 317, 166-170.
11. Russom, A., Tooke, N., Andersson, H., Stemme, G., J. Chromatogr. A 2003, 1014, 37-45.
12. Pettersson, M., Bylund, M., Alderborn, A., Genomics 2003, 82, 390-396.
13. Verri, A., Focher, F., Tettamanti, G., Grazioli, V., Clin. Chem. 2005, 51, 1282-1284.
14. Palmieri, O., Toth, S., Ferraris, A., Andriulli, A. et al., Clin. Chem. 2003, 49, 1675-1679.
15. Syed, A. A., Irving, J. A., Redfern, C. P., Hall, A. G. et al., J. Clin. Endocrinol. Metab. 2004, 89, 232-235.
16. Sinclair, A., Arnold, C., Woodford, N., Antimicrob. Agents Chemother. 2003, 47, 3620-3622.
17. Holmberg, K., Persson, M. L., Uhlen, M., Odeberg, J., Clin. Chem. 2005, 51, 1549-1552.
18. Holmberg, A., Blomstergren, A., Nord, O., Lukacs, M. et al., Electrophoresis 2005, 26, 501-510.
19. Ji, M., Hou, R, Li, S., He, N., Lu, Z., Mutat. Res. 2004, 548, 97-105.
20. Ronaghi, M., Genome Res. 2001, 11, 3-11.
21. Wang, H., Li, J., Liu, H., Liu, Q. et al., Nucleic Acids Res. 2002, 30, e61.
22. Afanassiev, V., Hanemann, V., Wolfl, S., Nucleic Acids Res. 2000, 28, E66.
23. Wang, Y., Wang, H., Gao, L., Liu, H. et al., J. Nanosci. Nanotechnol. 2005, 5, 653-658.
24. Rubina, A. Y., Pan'kov, S. V., Dementieva, E. I., Pen'kov, D. N. et al., Anal. Biochem. 2004, 325, 92-106.
25. Rehman, F. N., Audeh, M., Abrams, E. S., Hammond, P. W. et al., Nucleic Acids Res. 1999, 27, 649-655.
26. Xiao, P. F., Chang, L., Wan, Y., Sun, B. L. et al., Electrophoresis 2006, 27, 3904-3915.
27. Dunker, J., Larsson, U., Petersson, D., Forsell, J. et al., BioTechniques 2003, 34, 862-866, 868.
28. Zhou, G., Kamahori, M., Okano, K., Harada, K., Kambara, H., Electrophoresis 2001, 22, 3497-3504.
29. Sambrook, J., Russell, D. W., Molecular Cloning: A Laborator Manual (III), Cold Spring Harbor Laboratory Press, Cold Spring Harbor 2003, Chapters 5 and 10.
30. Yershov, G., Barsky V., Belgovskiy, A., Kirillov, E. et al., Proc. Natl. Acad Sci. USA 1996, 93, 4913-4918.
31. Dyukova, V. I., Dementieva, E. I., Zubtsov, D. A., Galanina, O.E. et al., Anal. Biochem. 2005, 347, 94-105.
32. Mitra, R. D., Church, G. M., Nucleic Acids Res. 1999, 27, e34.
33. Dubiley, S., Kirillov, E., Lysov, Y., Mirzabekov, A., Nucleic Acids Res. 1997, 25, 2259-2265.
34. Mitra, R. D., Shendure, J., Olejnik, J., Edyta Krzymanska, O., Church, G. M., Anal. Biochem. 2003, 320, 55-65.
35. Dubiley, S., Kirillov, E., Mirzabekov, A., Nucleic Acids Res. 1999, 27, e19.
36. Ahmadian, A., Gharizadeh, B., Gustafsson, A. C., Sterky, F. et al., Anal. Biochem. 2000, 280, 103-110.