An integrated genetic linkage map of pepper (Capsicum spp.)

Molecular Breeding

Volumn 13, Issue 3, 2004, Pages 251-261

  Paran, Ilan ^a   Van Der Voort, Jeroen Rouppe ^b   Lefebvre, Véronique ^c   Jahn, Molly ^d   Landry, Laurie ^d   Van Schrick, Marco ^b   Tanyolac, Bahattin ^a   Caranta, Carole ^c   Chaim, Arnon Ben ^a   Livingstone, Kevin ^d   Palloix, Alain ^c   Peleman, Johan ^b  

^a VOLCANI CENTER   (Israel)

^b KEYGENE N V   (Netherlands)

^c CEMAGREF   (France)

^d Department of Obstetrics Gynecology   (United States)

Author keywords

Capsicum; Integrated linkage map; Molecular markers

Indexed keywords

ANCHOR MARKER; CAPSICUM; CAPSICUM SPP; GENETIC LINKAGE MAPS; GENETIC MAP; INTEGRATED LINKAGE MAP; LINKAGE MAP; MAP INTEGRATIONS; MOLECULAR MARKER; PROPRIETARY SOFTWARE;

GENES;

CAPSICUM; EMBRYOPHYTA;

EID: 3442896891     PISSN: 13803743     EISSN: None     Source Type: Journal    
DOI: 10.1023/B:MOLB.0000022526.30914.31     Document Type: Article

References (29)

1. Ben Chaim A., Paran I., Grube R., Jahn M., van Wijk R. and Peleman J. 2001a. QTL mapping of fruit related traits in pepper (Capsicum annuum). Theor. Appl. Genet. 102: 1016-1028.
2. Ben Chaim A., Grube R., Lapidot M., Jahn M. and Paran I. 2001b. Identification of quantitative trait loci associated with resistance to cucumber mosaic virus in Capsicum annuum. Theor. Appl. Genet. 102: 1213-1220.
3. Caranta C., Lefebvre V. and Palloix A. 1997. Polygenic resistance of pepper to potyviruses consists of a combination of isolate specific and broad spectrum quantitative trait loci. Mol. Plant-Microbe Interactions 10: 872-878.
4. Gedil M.A., Wye C., Berry S., Segers B., Peleman J., Jones R., Leon A., Slabaugh M.B. and Knapp S.J. 2001. An integrated restriction fragment length polymorphism-amplified fragment length polymorphism linkage map for cultivated sunflower. Genome 44: 213-221.
5. Grube R.C., Blauth J.R., Arnedo Andres M.S., Caranta C. and Jahn M.M. 2000. Identification and comparative mapping of a dominant potyvirus gene cluster in Capsicum. Theor. Appl. Genet. 101: 852-859.
6. 2 populations. Theor. Appl. Genet. 99: 254-271.
7. Jahn M., Paran I., Hoffmann K., Radwansky E., Livingstone K., Grube R., Aftergoot E., Lapidot M. and Moyer J., 2000. Genetic mapping of the Tsw locus for resistance to the Tospovirus tomato spotted wilt virus in Capsicum spp. and its relationship to the Sw-5 gene for resistance to the same pathogen in tomato. Mol. Plant- Microbe Interaction 13: 673-682.
8. 2 populations. Theor. Appl. Genet. 103: 638-647.
9. 2 linkage map in pepper using RFLP and AFLP markers. Theor. Appl. Genet. 102: 531-539.
10. Lefebvre V., Palloix A., Caranta C. and Pochard E. 1995. Construction of an intra-specific integrated linkage map of pepper using molecular markers and doubled-haploid progenies. Genome 38: 112-121.
11. Lefebvre V. and Palloix A. 1996. Both epistatic and additive effects of QTLs are involved in polygenic-induced resistance to disease: a case study, the interaction pepper-phytophthora capsici Leon. Theor. Appl. Genet. 94: 503-511.
12. Lefebvre V., Kuntz M., Camara B. and Palloix A. 1998. Capsanthin-capsorubin synthase gene: a candidate gene for the y locus controlling the red fruit color in pepper. Plant Mol. Biol. 36: 785-789.
13. Lefebvre V., Pflieger S., Thabuis A., Caranta C., Blattes A., Chauvet J.- C., Daubeze A.M. and Palloix A. 2002. Towards the saturation of the pepper linkage map by alignment of three intraspecific maps including known-function genes. Genome 45: 839-854.
14. Livingstone K.D., Lackney V.K., Blauth J., Wijk V.R. and Jahn M.M. 1999. Genome mapping in Capsicum and the evolution of genome structure in the Solanaceae. Genetics 152: 1183-1202.
15. Lombard V. and Delourme R. 2001. A concensus linkage map for rapeseed (Brassica napus L.): construction and integretaion of three individual maps from DH populations. Theor. Appl. Genet. 103: 491-507.
16. Michelmore R.W., Paran I. and Kesseli R. 1991. Identification of markers linked to disease resistance genes by bulked segregant analysis: A rapid method to detect markers in specific genomic regions by using segregating populations. Proc. Natl. Acad. Sci. USA 88: 9828-9832.
17. van Ooijen J.W. 1994. DrawMap: a computer program for drawing genetic linkage maps. J. Hered. 85: 66.
18. Paterson A.H., Bowers J.E., Burow M.D., Draye X., Elsik C.G., Jiang C-. X., Katsar C.S., Lan T-. H., Lin Y-. R., Ming R. and Wright R.J. 2000. Comparative Genomics of Plant Chromosomes. Plant Cell 12: 1523-1540.
19. Peleman J., van Wijk R., van Oeveren J. and van Schaik R. 2000. Linkage map integration: an integrated genetic map of Zea mays L. Poster P472. Plant and Animal Genome Conference VIII, San Diego, California, USA.
20. Prince J.P., Pochard E. and Tanksley S.D. 1993. Construction of molecular linkage map of pepper and a comparison of synteny with tomato. Genome 36: 404-417.
21. Qi X., Stam P. and Lindhout P. 1998. Use of locus-specific AFLP markers to construct a high-density molecular map in barley. Theor. Appl. Genet. 96: 376-384.
22. Rao G.U., Ben Chaim A., Borovsky E. and Paran I. 2003. Mapping of yield related QTLs in pepper in an inter-specific cross of Capsicum annuum and C. frutescens. Theor. Appl. Genet. 106: 1457-1466.
23. Rouppe van der Voort J., van Zandvoort P., van Eck H.J., Folkertsma R., Hutten R., Draaistra J., Gommers F., Jacobsen E., Helder J. and Bakker J. 1997. Use of allele specificity of comigrating AFLP markers to align genetic maps from different potato genotypes. Mol. Gen. Genet. 255: 438-447.
24. Sebastian R.L., Howell E.C., Kink G.J., Marshall D.F. and Kearsey M.J. 2000. An integrated AFLP and RFLP Brassica oleracea linkage map from two morphologically distinct doubled-haploid mapping populations. Theor. Appl. Genet. 100: 75-81.
25. Tanksley S.D., Bernatzky R., Lapitan N.L. and Prince J.P. 1988. Conservation of gene repertoire but not gene order in pepper and tomato. Proc. Natl. Acad. Sci. 85: 6419-6423.
26. Thabuis A., Palloix A., Pflieger S. Daubeze A.M., Caranta C. and Lefebvre V. 2003. Comparative mapping of Phytophthora resistance loci in pepper germplasm: evidence for conserved resistance loci across solanaceae and for a large genetic diversity. Theor. Appl. Genet. 106: 1473-1485.
27. Thorup T.A., Tanyolac B., Livingstone K.D., Popovsky S., Paran I. and Jahn M. 2000. Candidate gene analysis of organ pigmentation loci in the Solanaceae. Proc. Natl. Acad. Sci. USA 97: 11192-11197.
28. Vuylsteke M., Mank R., Antonise R., Bastiaanse E., Senior M.L., Stuber C.W., Melchinger A.E., Lübberstedt T., Xia X.C., Stam P., Zabeau M. and Kuiper M. 1999. Two high-density AFLP® linkage maps of Zea mays L.: analysis of distribution of AFLP markers. Theor. Appl. Genet. 99: 921-935.
29. Waugh R., Bonar N., Baird E., Thomas B., Graner A., Hayes P., Powell W. 1997. Homology of AFLP products in three mapping populations of barley. Mol. Gen. Genet. 255: 311-321.