Purification of DNA from chloroplast and mitochondria of sugarcane

Current Science

Volumn 92, Issue 11, 2007, Pages 1613-1619

  Virupakshi, S ^a   Naik, G R ^b  

^a TATA INSTITUTE OF FUNDAMENTAL RESEARCH   (India)

^b GULBARGA UNIVERSITY   (India)

Author keywords

Chloroplast and mitochondrial DNA; Organelle; Purification; Sugarcane

Indexed keywords

EID: 34347236821     PISSN: 00113891     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (26)

1. Bowman, C. M. and Dyer, T. A., Purification and analysis of DNA from wheat chloroplasts isolated in nonaqueous media. Anal. Biochem., 1982, 122, 108-118.
2. Herrmann, R. G., The preparation of circular DNA from plastids. In Methods in Chloroplast Molecular Biology (eds Edelman, M., Hallick, R. B. and Chua, N. H.), Elsevier Biomedical Press, Amsterdam, 1982, pp. 259-280.
3. Bookjans, G., Stummann, B. M. and Henningsen, K. W., Preparation of chloroplast DNA from pea plastids isolated in a medium of high ionic strength. Anal. Biochem., 1984, 141, 244-247.
4. Wilson, A. J. and Chourey, P. S., A rapid inexpensive method for the isolation of restrictable mitochondrial DNA from various plant species. Plant Cell Rep., 1998, 3, 237-239.
5. Hosaka, K., Ogihara, Y., Matsubayashi, M. and Tsunewaki, K., Phylogenetic relationship between the tuberous Solanum species as revealed by restriction endonuclease analysis of chloroplast DNA. Jpn. J. Genet., 1984, 59, 349-369.
6. Lichtenstein, C. P. and Draper, J., Genetic engineering of plants. In DNA Cloning (ed. Glover, D. M.), IRL Press, London, 1985, vol. II, p. 108.
7. Crouzillat, D., Leroy, P., Perrault, A. and Ledoigt, G., Molecular analysis of mitochondrial genome of Helianthus annuus in relation to cytoplasmic male sterility and phylogeny. Theor. Appl. Genet., 1987, 74, 773-780.
8. Douce, R., Bourguignon, J., Brouquisse, R. and Neuburger, M., Isolation of plant mitochondria: General principles and criteria of integrity. Methods Enzymol., 1987, 148, 403-415.
9. Kemble, R. J., A rapid single leaf, nucleic acid assay for determining the cytoplasmic organelle complement of rapeseed and related Brassica species. Theor. Appl. Genet., 1987, 73, 451-458.
10. Kohler, R. H., Horn, R., Lossl, A. and Zetsche, K., Cytoplasmic male sterility in sunflower is correlated with the co-transcription of a new open reading frame with the atp-A gene. Mol. Gen. Genet., 1991, 227, 369-376.
11. Pehu, E., RFLP analysis of organellar genomes in somatic hybrids. In Plant Tissue Culture Manual D6, Kluwer, The Netherlands, 1991, pp. 1-8.
12. Mackenzie, S. A., Isolation of plant mitochondria and mitochondrial nucleic acids. In Plant Molecular Biology Manual D3, Kluwer, The Netherlands, 1994, pp. 1-12.
13. Maliga, P., Klessig, D. F., Cashmore, A. R., Gruissem, W. and Varner, J. E., Isolation of intact chloroplasts from spinach. In Methods in Plant Molecular Biology: A Laboratory Course Manual, Cold Spring Harbour Laboratory Press, New York, 1995, pp. 194-197.
14. Triboush, S. O., Danilenko, N. G. and Davydenko, O. G., A method for isolation of chloroplast DNA and mitochondrial DNA from sunflower. Plant Mol. Biol. Rep., 1998, 16, 183-189.
15. Scotti, N., Cardi, T. and Drouard, L. M., Mitochondrial DNA and RNA isolation from small amounts of potato tissue. Plant Mol. Biol. Rep., 2001, 19, 67a-67h.
16. Baum, B. R. and Bailey, L. G., Species relationships in the Hordeum murinum viewed from chloroplast DNA restriction fragment patterns. Theor. Appl. Genet., 1989, 78, 311-317.
17. Perez, C., Bonavent, J. F. and Berville, A., Preparation of mitochondrial DNAs from sunflowers (Helianthus annus L.) and from beets (Beta vulgaria) using a medium with high ionic strength. Plant Mol. Biol. Rep., 1990, 8, 104-113.
18. Loomis, W. D., Overcoming problems of phenolics and quinones in the isolation of plant enzymes and organelles. Methods Enzymol., 1974, 31, 528-544.
19. Tabaeizadeh, Z., Daryl, R. and Indra, K. V., Analysis of mitochondrial DNA from somatic hybrid cell lines of Saccharum officinarum (sugarcane) and Pennisetum americanum (pearl millet). Plant Mol. Biol., 1987, 8, 509-513.
20. Kik, C., Samoylov, A. M., Verbeek, W. H. J. and van Raamsdonk, L. W. D., Mitochondrial DNA variation and crossability of leek (Allium porrum) and its wild relatives from the Allium ampeloprasum complex. Theor. Appl. Genet., 1997, 94, 465-471.
21. Loeb, I. E. and Chouvean, I., Preparation deu DNA par Filtration sur gel agarose. Biochim. Biophys. Acta, 1969, 182, 225-234.
22. Jones, M. C. and Boffey, S. A., Deoxyribonuclease activities of wheat seedlings. FEBS Lett., 1984, 174, 215-218.
23. Singh, A. K., Chauhan, S. and Singhal, G. S., A simple and rapid aqueous method for the purification of DNA from wheat chloroplast. J. Plant Biochem. Biotechnol., 1995, 4, 51-53.
24. Murray, G. M. and Thompson, W. F., Rapid isolation of high molecular weight DNA. Nucleic Acids Res., 1980, 8, 4321-4325.
25. Taberlet, P., Gielly, L., Pautou, G. and Bouvet, J., Universal primers for amplification of three non-coding regions of chloroplast DNA. Plant Mol. Biol., 1991, 17, 1105-1109.
26. Demesure, B., Sodzi, N. and Petit, R. J., A set of universal primers for amplification of polymorphic non-coding regions of mitochondrial and chloroplast DNA in plants. Mol. Ecol., 1995, 4, 129-131.