Commentary: Open access and open source in chemistry

Chemistry Central Journal

Volumn 1, Issue 1, 2007, Pages

  Todd, Matthew H ^a  

^a UNIVERSITY OF SYDNEY   (Australia)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 34250901787     PISSN: None     EISSN: 1752153X     Source Type: Journal    
DOI: 10.1186/1752-153X-1-3     Document Type: Review

References (45)

1. The Google Story 1st edition. Edited by: Vise DA. Macmillan, London; 2005.
2. INASP [http://www.inasp.info/peri/resources.shtml]
3. ICSU [http://www.icsu.org/5_abouticsu/INTRO.php]
4. Butler D: Open-access Journal Hits Rocky Times. Nature 2006, 441:914.
5. Timeline of the open access movement [http://www.earlham.edu/ ~peters/fos/timeline.htm]
6. arXiv [http://arxiv.org/]
7. Gaillard C, Strauss F: DNA Loops and Semicatenated DNA Junctions. BMC Biochemistry 2000, 1:1.
8. Directory of Open Access Journals [http://www.doaj.org]
9. Arkivoc [http://www.arkat-usa.org]
10. Beilstein Journal of Organic Chemistry [http://bjoc. beilstein-journals.org/home/]
11. Ledford H: Funding Agencies Toughen Stance on Open Access. Nature 2006, 443:894.
12. Emolecules [http://www.emolecules.com/]
13. The eMolecules Blog [http://www.emolecules.com/doc/ announcements/emolecules_blog.htm]
14. The PubChem Project [http://pubchem.ncbi.nlm.nih.gov/]
15. Collaborative Drug Discovery [http://www.collaborativedrug. com]
16. The Sandier Centre [ http://www.ucsf.edu/mckerrow/fruit.html]
17. Google Book Search [http://books.google.com/googlebooks/ newsviews/history.html]
18. Open Content Alliance [http://www.opencontentalliance.org/]
19. Open Access News [http://www.earlham.edu/~peters/fos/fosblog. html]
20. Boston Consulting Group/OSTG Hacker Survey [http://www.ostg. com/bcg/]
21. Titmuss Richard M: The Gift Relationship: From Human Blood to Social Policy Alien and Unwin; London; 1970.
22. Nature's responses to Encyclopaedia Britannica [http://www.nature.com/nature/britannica/index.html]
23. Winchester Simon: The Professor and the Madman 1st edition. Harper Collins: New York; 1998.
24. Kepler TB, Marti-Renom MA, Maurer SM, Rai AK, Taylor G, Todd MH: Open Source Research - The Power of Us. Aust J Chem 2006, 59:291-294 [http://www.publish.csiro.au/nid/51/paper/CH06095.htm].
25. Tenderbutton (Username "tender"; password "button") [http://archive.tenderbutton.com/]
26. Org Prep Daily [http://orgprepdaily.wordpress.com]
27. BKchem [http://bkchem.zirael.org/index.html]
28. Krause S, Willighagen EL, Steinbeck C: JChemPaint - Using the Collaborative Forces of the Internet to Develop a Free Editor for 2D Chemical Structures. Molecules 2000, 5:93-98 [http:/ /sourceforge.net/projects/jchempaint].
29. Jmol [http://www.jmol.org]
30. MDLChime [http://www.mdl.com/products/framework/chime/]
31. Directory of Open Source Chemistry Tools at the Open Science Project [http://www.openscience.org/links/index.php?section=7]
32. Guha R, Howard TM, Hutchison GR, Murray-Rust P, Rzepa H, Steinbeck C, Wegner J, Willighagen EL: The Blue Obelisk - Interoperability in Chemical Informatics. J Chem Inf Model 2006, 46:991-998.
33. Blue Obelisk wiki [http://wiki.cubic.uni-koeln.de/bowiki/index. php/Main_Page]
34. Geldenhuys WJ, Gaasch KE, Watson M, Allen DD, Van der Schyf CJ: Optimising the Use of Open-source Software Applications in Drug Discovery. Drug Discov Today 2006, 11:127-132.
35. DeLano WL: The Case for Open-source Software in Drug Discovery. Drug Discov Today 2005, 10:213-217.
36. Organic Syntheses [http://www.orgsyn.org/]
37. Synthetic Pages [http://www.syntheticpages.org/]
38. Openwetware protocols [http://openwetware.org/wiki/Protocols: Protocol-online at http://www.protocol-online.org/]
39. Usefulchem [http://usefulchem.wikispaces.com/]
40. The Synaptic Leap [http://www.thesynapticleap.org/]
41. Everts S: Open Source Science. C & E News 2006, 84:34-35.
42. Open, but Not as Usual. Economist 378(8469):69-71.
43. Tropical Disease Initiative [ http://www.tropicaldisease.org/]
44. Fenwick A, Savioli L, Engels D, Bergquist R, Todd MH: Drugs for the Control of Parasitic Diseases: Current Status and Development. Schistosomiasis. Trends in Parasitology 2003, 19:509-515.
45. Munos B: Can open-source R&D reinvigorate Drug Research? Nat Rev Drug Discov 2006, 5:723-729.