Characterization of the Casein gene complex in West African goats and description of a new αs1-Casein polymorphism

Journal of Dairy Science

Volumn 90, Issue 6, 2007, Pages 2989-2996

  Caroli, A ^a   Chiatti, F ^b   Chessa, S ^b   Rignanese, D ^b   Ibeagha Awemu, E M ^c,d   Erhardt, G ^d  

^a UNIVERSITY OF BRESCIA   (Italy)

^b UNIVERSITY OF MILAN   (Italy)

^c MCGILL UNIVERSITY   (Canada)

^d JUSTUS LIEBIG UNIVERSITY   (Germany)

Author keywords

Casein complex; Goat; West Africa; s1 casein

Indexed keywords

CAPRA HIRCUS;

CASEIN;

ANIMAL; ARTICLE; BREEDING; CHEMISTRY; CODON; FEMALE; GENE FREQUENCY; GENE LINKAGE DISEQUILIBRIUM; GENETICS; GOAT; HAPLOTYPE; HUMAN; LACTATION; MILK; NUCLEOTIDE SEQUENCE; NUTRITIONAL VALUE; PHYSIOLOGY; SINGLE STRAND CONFORMATION POLYMORPHISM; STANDARD;

ANIMALS; BASE SEQUENCE; BREEDING; CASEINS; CODON; FEMALE; GENE FREQUENCY; GOATS; HAPLOTYPES; HUMANS; LACTATION; LINKAGE DISEQUILIBRIUM; MILK; NUTRITIVE VALUE; POLYMORPHISM, SINGLE-STRANDED CONFORMATIONAL;

EID: 34250893612     PISSN: 00220302     EISSN: 15253198     Source Type: Journal    
DOI: 10.3168/jds.2006-674     Document Type: Article

References (50)

1. Agyemang, K. 2005. Trypanotolerant livestock in the context of trypanosomiasis intervention strategies. PAAT Technical Information Series 7. FAO, Rome, Italy.
2. Angiolillo, A., M. H. Yahyaoui, A. Sanchez, F. Pilla, and J. M. Folch. 2002. Characterization of a new genetic variant in the caprine κ-casein gene. J. Dairy Sci. 85:2679-2680.
3. Awemu, E. M., L. N. Nwakalor, and B. Y. Abubakar. 1999. Environmental influences on preweaning mortality and reproductive performance of Red Sokoto does. Small Rumin. Res. 34:161-165.
4. Bassam, B. J., G. Caetano-Anolles, and P. M. Gresshoff. 1991. Fast and sensitive silver staining of DNA in Polyacrylamide gels. Anal. Biochem. 196:80-83.
5. Bemji, M. N. 2003. Milk production and preweaning growth of West African Dwarf and Red Sokoyo goat. PhD thesis. University of Agriculture, Abeokuta, Nigeria.
6. Boulanger, A., F. Grosclaude, and M. F. Mahé. 1984. Polymorphisme des caséines asi and as2 de la chèvre (Capra hircus). Genet. Sel. Evol. 16:157-176.
7. s2- casein. Anim. Genet. 25:173-177.
8. Caroli, A., F. Chiatti, S. Chessa, D. Rignanese, P. Bolla, and G. Pagnacco. 2006. Focusing on the goat casein gene complex. J. Dairy Sci. 89:3178-3187.
9. Caroli, A., O. Jann, E. Budelli, P. Bolla, S. Jäger, and G. Erhardt. 2001. Genetic polymorphism of goat κ-casein (CSN3) in different breeds and characterization at DNA level. Anim. Genet. 32:226-230.
10. Chessa, S., E. Budelli, F. Chiatti, A. M. Cito, P. Bolla, and A. Caroli. 2005a. Predominance of β-casein (CSN2) C allele in goat breeds reared in Italy. J. Dairy Sci. 88:1878-1881.
11. Chessa, S., F. Chiatti, D. Rignanese, P. Bolla, and A. Caroli. 2005b. Casein haplotype variability in Apulian goat breeds. CD XIII Congresso Internazionale Federazione Mediterranea Sanità e Produzione Ruminanti, Valenzano, Bari, Italy.
12. Cosenza, G., R. Illario, A. Rando, P. Di Gregorio, P. Masina, and L. Ramunno. 2003. Molecular characterization of the goat CSN1S101 allele. J. Dairy Res. 70:237-240.
13. Cosenza, G., A. Pauciullo, D. Gallo, D. Di Berardino, and L. Ramunno. 2005. A Sspl PCR-RFLP detecting a silent allele at the goat CSN2 locus. J. Dairy Res. 72:456-459.
14. Devendra, C., and G. B. McLeroy. 1982. Goat and Sheep Production in the Tropics. Longman, London, UK.
15. FAO. 2006. DAD-IS database, http://www.fao.org/dad-is/index.asp Accessed Dec. 15, 2006.
16. FAOSTAT. 2005. FAOSTAT data 2005. http://www.faostat.org/ Accessed Mar. 16, 2007.
17. FDLPCS (Federal Dept. Livestock and Pest Control Services). 1992. Nigerian Livestock Resources. Volume II. National Synthesis. FDLPCS, Abuja, Nigeria.
18. Ferretti, L., P. Leone, and V. Sgaramella. 1990. Long range restriction analysis of the bovine casein genes. Nucleic Acids Res. 18:6829-6833.
19. Grosclaude, F., and P. Martin. 1997. Casein polymorphisms in the goat. Pages 241-253 in Milk Protein Polymorphism. International Dairy Federation, Brussels, Belgium.
20. s1 caprine, ses effets, son évolution. INRA Prod. Anim. 7:3-19.
21. Hall, T. A. 1999. BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp. Ser. 41:95-98.
22. Hayes, H., E. Petit, C. Bouniol, and P. Popescu. 1993. Localisation of the alpha-S2-casein gene (CASAS2) to the homologous cattle, sheep and goat chromosome 4 by in situ hybridisation. Cytogenet. Cell Genet. 64:282-285.
23. Jann, O., E. M. Prinzenberg, G. Luikart, A. Caroli, and G. Erhardt. 2004. High polymorphism in the κ-casein (CSN3) gene from wild and domestic caprine species revealed by DNA sequencing. J. Dairy Res. 71:188-195.
24. Jànsa Pérez, M., C. Leroux, A. Sanchez Bonastre, and P. Martin. 1994. Occurrence of a LINE element in the 3'UTR of an allelic form of the goat alpha s1-casein gene associated with a reduced level of protein synthesis. Gene 147:179-187.
25. Lagonigro, R., E. Pietrola, M. D'Andrea, C. Veltri, and F. Pilla. 2001. Molecular genetic characterization of the goat s2-casein E allele. Anim. Genet. 32:391-393.
26. Mahé, M. F., and F. Grosclaude. 1993. Polymorphism of β-casein in the Creole goat of Guadeloupe, evidence for a null allele. Genet. Sel. Evol. 25:403-408.
27. Malau-Aduli, A. E. O., and Y. R. Anlade. 2002. Comparative study of milk composition of cattle, sheep and goats in Nigeria. Anim. Sci. J. 73:541-544.
28. Meisel, H. 2005. Biochemical properties of peptides encrypted in bovine milk proteins. Curr. Med. Chem. 12:1905-1919.
29. Messine, O., V. N. Tanya, D. A. Mbah, and C. L. Tawah. 1995. Ressources génétiques animales du Cameroun. Passé, présent et avenir: Le cas de ruminants. Anim. Genet. Resour. Inf. 16:51-69.
30. Neveu, C., D. Molle, J. Moreno, P. Martin, and J. Léonid. 2002. Heterogeneity of caprine beta-casein elucidated by RP-HPLC/MS: Genetic variants and phosphorylation. J. Protein Chem. 21:557-567.
31. Persuy, M. A., C. Printz, J. F. Medrano, and J. C. Mercier. 1999. A single nucleotide deletion resulting in a premature stop codon is associated with marked reduction of transcripts from a goat β-casein null allele. Anim. Genet. 30:444.
32. Popescu, C. P., S. Long, P. Riggs, J. Womack, S. Schmutz, R. Fries, and D. S. Gallagher. 1996. Standardization of cattle karyotype nomenclature: Report of the committee for the standardization of the cattle karyotype. Cytogenet. Cell Genet. 74:259-261.
33. Prinzenberg, E. M., K. Gutscher, S. Chessa, A. Caroli, and G. Erhardt. 2005. Caprine κ-casein (CSN3) polymorphism: New developments of the molecular knowledge. J. Dairy Sci. 88:1490-1498.
34. Ramunno, L., G. Cosenza, M. Pappalardo, E. Longobardi, D. Gallo, N. Pastore, P. Di Gregorio, and A. Rando. 2001a. Characterization of two new alleles at the goat CSN1S2 locus. Anim. Genet. 32:264-268.
35. Ramunno, L., G. Cosenza, M. Pappalardo, N. Pastore, D. Gallo, P. Di Gregorio, and P. Masina. 2000. Identification of the goat CSN1S1F allele by means of PCR-RFLP method. Anim. Genet. 31:342.
36. Ramunno, L., G. Cosenza, A. Rando, A. Pauciullo, R. Illario, D. Gallo, D. Di Berardino, and P. Masina. 2005. Comparative analysis of gene sequence of goat CSN1S1 F and N alleles and characterization of CSN1S1 transcript variants in mammary gland. Gene 345:289-299.
37. Ramunno, L., E. Longobardi, G. Cosenza, P. Di Gregorio, A. Rando, and P. Masina. 1999. A PstI PCR-RFLP at the goat CSN1S2 gene. Anim. Genet. 30:242.
38. Ramunno, L., E. Longobardi, M. Pappalardo, A. Rando, P. Di Gregorio, G. Cosenza, P. Mariani, N. Pastore, and P. Masina. 2001b. An allele associated with a non detectable amount of alpha s2casein in goat milk. Anim. Genet. 32:19-26.
39. Ramunno, L., P. Mariani, M. Pappalardo, A. Rando, M. Capuano, P. Di Gregorio, and G. Cosenza. 1995. Un gene ad effetto maggiore sul contenuto di caseina β nel latte di capra. Pages 185-186 in Proc. XI Conv. ASPA, Grado, Italy.
40. Rando, A., L. Ramunno, and P. Masina. 2000. Mutations in casein genes. Zoot. Nutriz. Anim. 26:105-114.
41. Raymond, M., and F. Rousset. 1995. Genepop (version 1.2): Population genetics software for exact test and ecumenicism. J. Hered. 86:248-249.
42. Rhoades, J. R., G. R. Gibson, K. Formentin, M. Beer, N. Greenberg, and R. A. Rastal. 2005. Caseinoglycomacropeptide inhibits adhesion of pathogenic Escherichia coli strains to human cells in culture. J. Dairy Sci. 88:3455-3459.
43. Ruminations. 2007. The Nigerian Dwarf and Mini Dairy Goat Magazine. http://www.karmadillo.com/Ruminations Accessed Mar. 16, 2007.
44. Sacchi, P., S. Chessa, E. Budelli, P. Bolla, G. Ceriotti, D. Soglia, R. Rasero, E. Cauvin, and A. Caroli. 2005. Casein haplotype structure in five Italian goat breeds. J. Dairy Sci. 88:1561-1568.
45. Tadlaoui Ouafi, A., J.-M. Babilliot, C. Leroux, and P. Martin. 2002. Genetic diversity of the two main Moroccan goat breeds: Phylogenetic relationships with four breeds reared in France. Small Rumin. Res. 45:225-233.
46. Threadgill, D. W., and J. E. Womack. 1990. Genomic analysis of the major bovine milk proteins genes. Nucleic Acids Res. 18:6935-6942.
47. Wetherbee, K. 2002. Want Milk? Get Goats. Mother Earth News. Issue 192. http://www.motherearthnews.com/Livestock-and-Farming/2002-06-01/ Want-Milk-Get-Goats.aspx Accessed Mar. 18, 2007.
48. Xie, X., and J. Ott. 1993. Testing linkage disequilibrium between a disease gene and marker loci. Am. J. Hum. Genet. 53:1107.
49. Yahyaoui, M. H., A. Angiolillo, F. Pilla, A. Sanchez, and J. M. Folch. 2003. Characterization and genotyping of the caprine kappa casein variants. J. Dairy Sci. 86:2715-2720.
50. Yahyaoui, M. H., A. Coll, A. Sanchez, and J. M. Folch. 2001. Genetic polymorphism of the caprine kappa casein gene. J. Dairy Res. 68:209-216.