Smokers and passive smokers gene expression profiles: Correlation with the DNA oxidation damage

Free Radical Biology and Medicine

Volumn 43, Issue 3, 2007, Pages 415-422

  Lodovici, Maura ^a   Luceri, Cristina ^a   De Filippo, Carlotta ^a   Romualdi, Chiara ^b   Bambi, Franco ^c   Dolara, Piero ^a  

^a UNIVERSITY OF FLORENCE   (Italy)

^b UNIVERSITY OF PADOVA   (Italy)

^c UNIVERSITY OF FLORENCE   (Italy)

Author keywords

Gene expression; Microarrays; Oxidative DNA damage; Passive smoking; Smoking

Indexed keywords

COTININE; CYTOKINE; RNA; TOBACCO SMOKE;

ARTICLE; CONTROLLED STUDY; DNA DAMAGE; DNA MICROARRAY; DNA REPAIR; FEMALE; GENE EXPRESSION PROFILING; HUMAN; HUMAN CELL; HUMAN EXPERIMENT; INFLAMMATION; LYMPHOCYTE ACTIVATION; MALE; NORMAL HUMAN; OXIDATIVE STRESS; PASSIVE SMOKING; PERIPHERAL LYMPHOCYTE; PRIORITY JOURNAL; RNA HYBRIDIZATION; SMOKING; XENOBIOTIC METABOLISM;

ADOLESCENT; ADULT; DNA DAMAGE; DOWN-REGULATION; FEMALE; GENE EXPRESSION PROFILING; HUMANS; MALE; MIDDLE AGED; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; OXIDATION-REDUCTION; PRINCIPAL COMPONENT ANALYSIS; SMOKING; TOBACCO SMOKE POLLUTION; UP-REGULATION;

NICOTIANA TABACUM;

EID: 34250890852     PISSN: 08915849     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.freeradbiomed.2007.04.018     Document Type: Article

References (35)

1. Willigendael E.M., Teijink J.A., Bartelink M.L., Kuiken B.W., Boiten J., Moll F.L., Buller H.R., and Prins M.H. Influence of smoking on incidence and prevalence of peripheral arterial disease. J. Vasc. Surg. 40 (2004) 1158-1165
2. Sasco A.J., Secretan M.B., and Straif K. Tobacco smoking and cancer: a brief review of recent epidemiological evidence. Lung Cancer 45 (2004) S3-S9
3. Lampe J.W., Stepaniants S.B., Mao M., Radich J.P., Dai H., Linsley P.S., Friend S.H., and Potter J.D. Signatures of environmental exposures using peripheral leukocyte gene expression: tobacco smoke. Cancer Epidemiol. Biomarkers Prev. 13 (2004) 445-453
4. Spira A., Beane J., Shah V., Liu G., Schembri F., Yang X., Palma J., and Brody J.S. Effects of cigarette smoke on the human airway epithelial cell transcriptome. Proc. Natl. Acad. Sci. U.S.A. 101 (2004) 10143-10148
5. Spira A., Beane J., Pinto-Plata V., Kadar A., Liu G., Shah V., Celli B., and Brody J.S. Gene expression profiling of human lung tissue from smokers with severe emphysema. Am. J. Respir. Cell Mol. Biol. 31 (2004) 601-610
6. Ning W., Li C.J., Kaminski N., Feghali-Bostwick C.A., Alber S.M., Di Y.P., Otterbein S.L., Song R., Hayashi S., Zhou Z., Pinsky D.J., Watkins S.C., Pilewski J.M., Sciurba F.C., Peters D.G., Hogg J.C., and Choi A.M. Comprehensive gene expression profiles reveal pathways related to the pathogenesis of chronic obstructive pulmonary disease. Proc. Natl. Acad. Sci. U.S.A. 101 (2004) 14895-14900
7. Shah V., Sridhar S., Beane J., Brody J.S., and Spira A. SIEGE: Smoking Induced Epithelial Gene Expression Database. Nucleic Acids Res. 33 (2005) D573-D579
8. Spivack S.D., Hurteau G.J., Jain R., Kumar S.V., Aldous K.M., Gierthy J.F., and Kaminsky L.S. Gene-environment interaction signatures by quantitative mRNA profiling in exfoliated buccal mucosal cells. Cancer Res. 64 (2004) 6805-6813
9. Zhang S., Day I.N., and Ye S. Microarray analysis of nicotine-induced changes in gene expression in endothelial cells. Physiol. Genomics 5 (2001) 187-192
10. Gebel S., Gerstmayer B., Bosio A., Haussmann H.J., Van Miert E., and Muller T. Gene expression profiling in respiratory tissues from rats exposed to mainstream cigarette smoke. Carcinogenesis 25 (2004) 169-178
11. Izzotti A., Cartiglia C., Longobardi M., Bagnasco M., Merello A., You M., Lubet R.A., and De Flora S. Gene expression in the lung of p53 mutant mice exposed to cigarette smoke. Cancer Res. 64 (2004) 8566-8572
12. Dusinska M., Ficek A., Horska A., Raslova K., Petrovska H., Vallova B., Drlickova M., Wood S.G., Stupakova A., Gasparovic J., Bobek P., Nagyova A., Kovacikova Z., Blazicek P., Liegebel U., and Collins A.R. Glutathione S-transferase polymorphisms influence the level of oxidative DNA damage and antioxidant protection in humans. Mutat. Res. 482 (2001) 47-55
13. Lodovici M., Luceri C., Guglielmi F., Bacci C., Akpan V., Fonnesu M.L., Boddi V., and Dolara P. Benzo(a)pyrene diolepoxide (BPDE)-DNA adduct levels in leukocytes of smokers in relation to polymorphism of CYP1A1, GSTM1, GSTP1, GSTT1, and mEH. Cancer Epidemiol. Biomarkers Prev. 13 (2004) 1342-1348
14. Rojas M., Alexandrov K., Cascorbi I., Brockmoller J., Likhachev A., Pozharisski K., Bouvier G., Auburtin G., Mayer L., Kopp-Schneider A., Roots I., and Bartsch H. benzo[a]pyrene High DNA diol-epoxide levels adduct lung in blood and from cells with individuals CYP1A1 combined MspI/Msp-GSTM1*0/*0 genotypes. Pharmacogenetics 8 (1998) 109-118
15. Georgiadis P., Demopoulos N.A., Topinka J., Stephanou G., Stoikidou M., Bekyrou M., Katsouyianni K., Sram R., Autrup H., and Kyrtopoulos S.A. Impact of phase I or phase II enzyme polymorphisms on lymphocyte DNA adducts in subjects exposed to urban air pollution and environmental tobacco smoke. Toxicol. Lett. 149 (2004) 269-280
16. Lan Q., Mumford J.L., Shen M., Demarini D.M., Bonner M.R., He X., Yeager M., Welch R., Chanock S., Tian L., Chapman R.S., Zheng T., Keohavong P., Caporaso N., and Rothman N. Oxidative damage-related genes AKR1C3 and OGG1 modulate risks for lung cancer due to exposure to PAH-rich coal combustion emissions. Carcinogenesis 25 (2004) 2177-2181
17. Lodovici M., Caldini S., Luceri C., Bambi F., Boddi V., and Dolara P. Active and passive smoking and lifestyle determinants of 8-oxo-7,8-dihydro-2-deoxyguanosine levels in human leukocyte DNA. Cancer Epidemiol. Biomarkers Prev. 14 (2005) 2975-2977
18. Chomczynski P. A reagent for the single-step simultaneous isolation of RNA, DNA and proteins from cell and tissue samples. Biotechniques 15 (1993) 532-537
19. Lodovici M., Casalini C., Cariaggi R., Michelucci L., and Dolara P. Levels of 8-hydroxydeoxyguanosine as a marker of DNA damage in human leukocytes. Free Radic. Biol. Med. 28 (2000) 13-17
20. Perkins S.L., Livesey J.F., Escares E.A., Belcher J.M., and Dudley D.K. High-performance liquid-chromatographic method compared with a modified radioimmunoassay of cotinine in plasma. Clin. Chem. 37 (1991) 1989-1993
21. Seedhouse C., Bainton R., Lewis M., Harding A., Russell N., and Das-Gupta E. The genotype distribution of the XRCC1 gene indicates a role for base excision repair in the development of therapy-related acute myeloblastic leukemia. Blood 100 (2002) 3761-3766
22. Elahi A., Zheng Z., Park J., Eyring K., McCaffrey T., and Lazarus P. The human OGG1 DNA repair enzyme and its association with orolaryngeal cancer risk. Carcinogenesis 23 (2002) 1229-1234
23. Dysvik B., and Jonassen I. J-Express: exploring gene expression data using Java. Bioinformatics 17 (2001) 369-370
24. In: Venables W.N., and Ripley B.D. (Eds). Modern applied statistics with S (2002), Springer-Verlag, New York
25. Tusher V.G., Tibshirani R., and Chu G. Significance analysis of microarrays applied to the ionizing radiation response. Proc. Natl. Acad. Sci. U.S.A. 98 (2001) 5116-5121
26. Perera F.P., Mooney L.A., Dickey C.P., Santella R.M., Bell D., Blaner W., Tang D., and Whyatt R.M. Molecular epidemiology in environmental carcinogenesis. Environ. Health Perspect. 104 Suppl 3 (1996) 441-443
27. Kiyohara C., Yoshimasu K., Shirakawa T., and Hopkin J.M. Genetic polymorphisms and environmental risk of lung cancer: a review. Rev. Environ. Health 19 (2004) 15-38
28. Wang X.L., Raveendran M., and Wang J. Genetic influence on cigarette-induced cardiovascular disease. Prog. Cardiovasc. Dis. 45 (2003) 361-382
29. Behrens P., Brinkmann U., and Wellmann A. CSE1L/CAS: its role in proliferation and apoptosis. Apoptosis 8 (2003) 39-44
30. Lowe JB. Selectin ligands, leukocyte trafficking, and fucosyltransferase genes. Kidney Int. 51 (1997) 1418-1426
31. Arcavi L., and Benowitz N.L. Cigarette smoking and infection. Arch. Intern. Med. 164 (2004) 2206-2216
32. Zeidel A., Beilin B., Yardeni I., Mayburd E., Smirnov G., and Bessler H. Immune response in asymptomatic smokers. Acta Anaesthesiol. Scand. 46 (2002) 959-964
33. Meneghini M.D., Wu M., and Madhani H.D. Conserved histone variant H2A.Z protects euchromatin from the ectopic spread of silent heterochromatin. Cell 112 (2003) 725-736
34. Moodie F.M., Marwick J.A., Anderson C.S., Szulakowski P., Biswas S.K., Bauter M.R., Kilty I., and Rahman I. Oxidative stress and cigarette smoke alter chromatin remodeling but differentially regulate NF-kappaB activation and proinflammatory cytokine release in alveolar epithelial cells. FASEB J. 18 (2004) 1897-1899
35. Cucina A., Sapienza P., Borrelli V., Corvino V., Foresi G., Randone B., Cavallaro A., and Santoro-D'Angelo L. Nicotine reorganizes cytoskeleton of vascular endothelial cell through platelet-derived growth factor BB. J. Surg. Res. 92 (2000) 233-238