Isolation and partial characterization of pigment-like antibiotics produced by a new strain of Streptosporangium isolated from an Algerian soil

Journal of Applied Microbiology

Volumn 103, Issue 1, 2007, Pages 228-236

  Boudjella, H ^a   Bouti, K ^a   Zitouni, A ^a   Mathieu, F ^b   Lebrihi, A ^b   Sabaou, N ^a  

^a Ecole Normale Superieure de Kouba   (Algeria)

^b LABORATOIRE DE GÉNIE CHIMIQUE   (France)

Author keywords

Actinomycetes; Antibiotics; Antimicrobial activity; Streptosporangium; Taxonomy

Indexed keywords

BACTERIA; CHEMOTHERAPY; CHROMATOGRAPHIC ANALYSIS; DISEASES; NUCLEAR MAGNETIC RESONANCE;

16S RDNA SEQUENCE; ACTINOMYCETE; ANTHRACYCLINES; ANTI-BACTERIAL ACTIVITY; ANTI-MICROBIAL ACTIVITY; MORPHOLOGICAL ANALYSIS; PARTIAL CHARACTERIZATION; PHYLOGENETIC ANALYSIS; PHYSIOLOGICAL CHARACTERISTICS; STREPTOSPORANGIUM;

ANTIBIOTICS;

5,6,8,13 TETRAHYDRO 1,6,9,14 TETRAHYDROXY 3 (2 HYDROXYPROPYL) 7 METHOXY 8,13 DIOXOBENZO[A]NAPHTHACENE 2 CARBOXYLIC ACID; ANTHRACYCLINE ANTIBIOTIC AGENT; ANTIBIOTIC AGENT; CARUBICIN; CHLORAMPHENICOL; CRYSTAL VIOLET; CYCLOHEXIMIDE; CYCLOSERINE; ERYTHROMYCIN; FRAGILOMYCIN; GENTAMICIN; KANAMYCIN; LYSOZYME; NOVOBIOCIN; OXYTETRACYCLINE; PENICILLIN DERIVATIVE; PHENOL DERIVATIVE; QUINONE DERIVATIVE; RIBOSOME DNA; RIFAMPICIN; SODIUM AZIDE; SODIUM CHLORIDE; STREPTOMYCIN; UNCLASSIFIED DRUG; VANCOMYCIN;

ANTIBIOTICS; ANTIMICROBIAL ACTIVITY; BACTERIUM; CHEMOTAXONOMY; DNA FINGERPRINTING; IDENTIFICATION METHOD; MORPHOLOGY; NEW SPECIES; PHYLOGENY; PIGMENT; SOIL MICROORGANISM;

ACTINOBACTERIA; ALGERIA; ANTIBACTERIAL ACTIVITY; ARTICLE; BACTERIUM CULTURE; BACTERIUM ISOLATION; CULTURE MEDIUM; FERMENTATION; GRAM POSITIVE BACTERIUM; INFRARED SPECTROSCOPY; ION TRAP MASS SPECTROMETRY; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; POLYMERASE CHAIN REACTION; PROTON NUCLEAR MAGNETIC RESONANCE; SCANNING ELECTRON MICROSCOPY; SOIL; STRAIN IDENTIFICATION; STREPTOSPORANGIUM; TAXONOMIC IDENTIFICATION; ULTRAVIOLET SPECTROSCOPY;

AFRICA; ALGERIA; NORTH AFRICA; SAHARA;

ACTINOBACTERIA (CLASS); POSIBACTERIA; STREPTOSPORANGIUM; STREPTOSPORANGIUM CARNEUM;

EID: 34250883787     PISSN: 13645072     EISSN: 13652672     Source Type: Journal    
DOI: 10.1111/j.1365-2672.2006.03280.x     Document Type: Article

References (45)

1. Athalye, M., Goodfellow, M., Lacey, J. White, R.P. (1985) Numerical classification of Actinomadura and Nocardiopsis. Int J Syst Bacteriol 35, 86 98.
2. Becker, B., Lechevalier, M.P., Gordon, R.E. Lechevalier, H.A. (1964) Rapid differentiation between Nocardia and Streptomyces by paper chromatography of whole-cell hydrolysates. Appl Microbiol 12, 421 423.
3. Betina, V. (1973) Bioautography in paper and thin layer chromatography and its scope in the antibiotic field. J Chromatogr 78, 41 51.
4. Brazhnikova, M.G., Zbarsky, V.B., Kudinova, M.K., Muravieva, L.I., Ponomarenko, V.I. Potapova, N.P. (1973) Carminomycin, a new antibiotic anthracycline. Antibiotik 18, 678 681.
5. Buckingham, J. (1997) Dictionary of Natural Products. England : Chapman and Hall/CRC.
6. Bycroft, B.W. (1988) Dictionary of Antibiotics and Related Substances. London : Chapman and Hall.
7. Cooper, R., Das, P., Federbush, C., Mierzwa, R., Patel, M., Pramanik, B. Truumees, I. (1990) Characterization of peptidyl-nucleoside antifungal antibiotics from fermentation broth. J Ind Microbiol 5, 1 8.
8. Felsenstein, J. (1985) Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39, 783 791.
9. Gilpin, M.L., Fulston, M., Payne, D., Cramp, R. Hood, I. (1995) Isolation and structure determination of two novel phenazines from a Streptomyces with inhibitory activity against metallo-enzymes, including metallo-β-lactamase. J Antibiot 48, 1081 1085.
10. Goodfellow, M. (1971) Numerical taxonomy of some nocardioform bacteria. J Gen Microbiol 69, 33 90.
11. Gordon, R.E. Barnett, D.A. (1977) Resistance to rifampicin and lysozyme of strains of some species of Mycobacterium and Nocardia as a taxonomic tool. Int J Syst Bacteriol 27, 176 178.
12. Gordon, R.E., Barnett, D.A., Handarhan, J.E. Hor-Nay-Pang, C. (1974) Nocardia coeliaca, Nocardia autotrophica and the nocardin strains. Int J Syst Bacteriol 24, 54 63.
13. Hayakawa, M. Nonomura, H. (1987) Humic acid-vitamin agar, a new medium for the selective isolation of soil actinomycetes. J Ferm Technol 65, 501 509.
14. Holt, J.G., Krieg, N.R., Sneath, P.H.A., Staley, J.T. Williams, S.T. (1994) Bergey's Manual of Determinative Bacteriology. Baltimore, USA : ed. Williams and Wilkins.
15. Hurley, L.H., Lasswell, W.L., Malhotra, R.K. Das, N.V. (1979) Pyrrolo[1,4]benzodiazepine antibiotics. Biosynthesis of the antitumor antibiotic sibiromycin by Streptosporangium sibiricum. Biochemistry 18, 4225 4229.
16. Jukes, T.H. Cantor, C.R. (1969) Evolution of protein molecules. In Mammalian Protein Metabolism. vol. 3. ed. Munro, H.N. pp. 21 132. New York : Academic Press.
17. Kumar, S., Tamura, K. Nei, M. (2004) MEGA3: integrated software for molecular evolutionary genetic analysis and sequence alignment. Briefings Bioinfo 5, 150 163.
18. Lamari, L., Zitouni, A., Boudjella, H., Badji, B., Sabaou, N., Lebrihi, A., Lefebvre, G., Seguin, E. et al. (2002) New dithiolopyrrolone antibiotics from Saccharothrix sp. SA 233. I. Taxonomy, fermentation, isolation and biological activities. J Antibiot 55, 696 701.
19. Lazzarini, A., Cavaletti, L., Toppo, G. Marinelli, F. (2001) Rare genera of actinomycetes as potential producers of new antibiotics. Ant v Leeuw 78, 399 405.
20. Lechevalier, M.P. Lechevalier, H.A. (1970) Chemical composition as a criterion in the classification of aerobic actinomycetes. Int J Syst Bacteriol 20, 435 443.
21. Lechevalier, M.P., De Bievre, C. Lechevalier, H.A. (1977) Chemotaxonomy of aerobic actinomycetes: phospholipid composition. Biochem Syst Ecol 5, 249 260.
22. Liu, D., Coloe, S., Baird, R. Pedersen, J. (2000) Rapid mini-preparation of fungal DNA for PCR. J Clinical Microbiol 38, 471.
23. Marchal, N., Bourdon, J.L. Richard, C.L. (1987) Les milieux de culture pour l'isolement et l'identification biochimique des bactéries. Paris : Doin Press.
24. Mertz, F.P. Yao, R.C. (1990) Streptosporangium carneum sp. nov. isolated from soil. Int J Syst Bacteriol 40, 247 253.
25. Minnikin, D.E., Patel, P.V., Alshamaony, L. Goodfellow, M. (1977) Polar lipid composition in the classification of Nocardia and related bacteria. Int J Syst Bacteriol 27, 104 117.
26. Mishra, S.K., Keller, J.E., Miller, J.R., Heisey, R.M., Nair, M.G. Putnam, A.R. (1987) Insecticidal and nematicidal properties of microbial metabolites. J Ind Microbiol 2, 267 276.
27. Nash, C.H., Shearer, M.C., Snader, K.M., Valenta, J.R. Cooper, D. (1981) Anthracycline antibiotics produced by Streptosporangium fragilis sp. nov. ATCC 31519. US Patent 4,293,546.
28. National Bureau of Standards, USA (1964) ISCC-NBS Color-name Charts Illustrated with Centroid Colors (supplement to National Bureau of Standards USA Circular 553). Gaithersburg, MD : National Bureau of Standards.
29. Newman, D.J., Cragg, G.M. Snader, K.M. (2003) Natural Products as sources of new drugs over the period 1981-2002. J Nat Prod 66, 1022 1037.
30. Nonomura, H. (1969) Distribution of actinomycetes in soil. VII. A culture method effective for both preferential isolation and enumeration of Microbispora and Streptosporangium strains in soil (Part 2). J Ferm Technol 47, 701 709.
31. Nonomura, H. (1989) Genus Streptosporangium Couch. In Bergey's Manual of Systematic Bacteriology. vol. 4. ed. Baltimore : Williams and Wilkins Co, pp. 2545 2551.
32. Omura, S., Eda, S., Funayama, S., Komiyama, K., Takahashi, Y. Woodruff, H.B. (1989) Studies on a novel antitumor antibiotic, phenazinomycin: taxonomy, fermentation, isolation, and physico-chemical and biological characteristics. J Antibiot 42, 1037 1042.
33. Sabaou, N., Boudjella, H., Bennadji, A., Mostefaoui, A., Zitouni, A., Lamari, L. Bennadji, H. (1998) Les sols des oasis du Sahara algérien, source d'actinomycètes rares producteurs d'antibiotiques. Sécheresse 9, 147 153.
34. Saitou, N. Nei, M. (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406 425.
35. Sanglier, J.J., Haag, H., Huck, T.A. Fehr, T. (1996) Review of actinomycetes compounds 1990-1995. Exp Opin Invest Drugs 5, 207 223.
36. Shirling, E.B. Gottlieb, D. (1966) Methods for characterization of Streptomyces species. Int J Syst Bacteriol 16, 3313 3340.
37. Takazawa, S., Kawamoto, I., Takahashi, I., Kohakura, M., Okachi, R., Sato, S., Yamamoto, M., Sato, T. et al. (1975) Platomycins A and B. Taxonomy of the producing strain and production, isolation and biological properties of platomycins. J Antibiot 28, 656 661.
38. Thompson, J.D., Higgins, D.G. Gibson, T.J. (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighing, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22, 4673 4680.
39. Tsurumi, Y., Ohhata, N., Iwamoto, T., Shigematsu, N., Sakamoto, K., Nishikawa, M., Kiyoto, S. Okuhara, M. (1994) WS79089A, B and C, new endothelin converting enzyme inhibitors isolated from Streptosporangium roseum. No. 79089. Taxonomy, fermentation, isolation, physico-chemical properties and biological activities. J Antibiot 47, 619 630.
40. Warren, H.B., Prokop, J.F. Grundy, W.E. (1955) Non synthetic media for antibiotic producing actinomycetes. Antibiot Chemother 5, 6 12.
41. Watve, M.G., Tickoo, R., Jog, M.M. Bhole, B.D. (2001) How many antibiotics are produced by the genus Streptomyces? Arch Microbiol 176, 386 390.
42. Zakharova, O.S., Zenova, G.M. Zvyagintsev, D.G. (2003) Some approaches to the selective isolation of actinomycetes of the genus Actinomadura from soil. Microbiology 72, 110 113.
43. Zhang, L.-P., Jiang, C.-L. Chen, W.-X. (2005) Streptosporangium yunnanense sp. nov., and Streptosporangium purpuratum sp. nov., from soil in China. Int J Syst Evol Microbiol 55, 719 724.
44. Zitouni, A., Boudjella, H., Mathieu, F., Sabaou, N. Lebrihi, A. (2004a) Mutactimycin PR, a new anthracycline antibiotic from Saccharothrix sp. SA 103. I. Taxonomy, fermentation, isolation and biological activities. J Antibiot 57, 367 372.
45. Zitouni, A., Lamari, L., Boudjella, H., Badji, B., Sabaou, N., Gaouar, A., Mathieu, F., Lebrihi, A. et al. (2004b) Saccharothrix algeriensis sp. nov., isolated from Saharan soil. Int J Syst Evol Microbiol 54, 1377 1381.