Crystal structure of a bacterial albumin-binding domain at 1.4 Å resolution

FEBS Letters

Volumn 581, Issue 17, 2007, Pages 3178-3182

  Cramer, Jacob Flyvholm ^a,b   Nordberg, Peter A ^c   Hajdu, Janos ^a,d   Lejon, Sara ^a  

^a UPPSALA UNIVERSITY   (Sweden)

^b AALBORG UNIVERSITY   (Denmark)

^c Astra Tech AB   (Sweden)

^d SLAC NATIONAL ACCELERATOR LABORATORY   (United States)

Author keywords

Bacterial mimicry; GA module; Human serum albumin; Peptostreptococcal albumin binding protein; X ray crystallography

Indexed keywords

ALBUMIN BINDING PROTEIN; BACTERIAL PROTEIN; HUMAN SERUM ALBUMIN; UNCLASSIFIED DRUG;

ARTICLE; BACTERIAL GROWTH; BACTERIAL VIRULENCE; CRYSTAL STRUCTURE; FINEGOLDIA MAGNA; GRAM POSITIVE BACTERIUM; GROWTH RATE; LIGHT SCATTERING; MOLECULAR MIMICRY; NONHUMAN; PRIORITY JOURNAL; PROTEIN BINDING; PROTEIN DOMAIN; PROTEIN EXPRESSION; PROTEIN PROTEIN INTERACTION; STRUCTURE ANALYSIS;

AMINO ACID SEQUENCE; BACTERIAL PROTEINS; BINDING SITES; CRYSTALLOGRAPHY, X-RAY; DIMERIZATION; HUMANS; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; PEPTOSTREPTOCOCCUS; PROTEIN INTERACTION MAPPING; PROTEIN STRUCTURE, TERTIARY; SERUM ALBUMIN;

BACTERIA (MICROORGANISMS); FINEGOLDIA MAGNA;

EID: 34250870124     PISSN: 00145793     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.febslet.2007.06.003     Document Type: Article

References (18)

1. de Château M., and Björck L. Protein PAB, a mosaic albumin-binding bacterial protein representing the first contemporary example of module shuffling. J. Biol. Chem. 269 (1994) 12147-12151
2. de Château M., Holst E., and Björck L. Protein PAB, an albumin-binding bacterial surface protein promoting growth and virulence. J. Biol. Chem. 271 (1996) 26609-26615
3. Johansson M.U., de Château M., Wikström M., Forsén S., Drakenberg T., and Björck L. Solution structure of the albumin-binding GA module: a versatile bacterial protein domain. J. Mol. Biol. 266 (1997) 859-865
4. Lejon S., Frick I.-M., Björck L., Wikström M., and Svensson S. Crystal structure and biological implications of a bacterial albumin binding module bound to human serum albumin. J. Biol. Chem. 279 (2004) 42924-42928
5. Nicholas R.A., Lamson D.R., and Schultz D.E. Penicillin-binding protein 1B from Escherichia coli contains a membrane association site in addition to its transmembrane anchor. J. Biol. Chem. 268 (1993) 5632-5641
6. Leslie, A.G.W., (1992). Recent changes to the MOSFLM package for processing film and image plate data. Joint CCP4 + ESF-EAMCB Newsletter on Protein Crystallography No. 26.
7. Evans P. Scaling and assessment of data quality. Acta Crystallogr., Sect. D Biol. Crystallogr. 62 (2006) 72-82
8. Vagin A., and Teplyakov A. MOLREP: an automated program for molecular replacement. J. Appl. Crystallogr. 30 (1997) 1022-1025
9. Murshudov G.N., Vagin A.A., and Dodson E.J. Refinement of macromolecular structures by the maximum-likelihood method. Acta Crystallogr., Sect. D Biol. Crystallogr. 53 (1997) 240-255
10. Emsley P., and Cowtan K. Coot: model-building tools for molecular graphics. Acta Crystallogr., Sect. D Biol. Crystallogr. 60 (2004) 2126-2132
11. Jones T.A., Zou J.-Y., Cowan S.W., and Kjeldgaard M. Improved methods for building protein models in electron density maps and the location of errors in these models. Acta Crystallogr., Sect. A 47 (1991) 110-119
12. Perrakis A., Morris R.M., and Lamzin V.S. Automated protein model building combined with iterative structure refinement. Nat. Struct. Biol. 6 (1999) 458-463
13. Laskowski R.A., MacArthur M.W., Moss D.S., and Thornton J.M. PROCHECK: a program to check the stereochemical quality of protein structures. J. Appl. Crystallogr. 26 (1993) 283-291
14. Krissinel E., and Henrick K. Detection of protein assemblies in crystals. In: Berthold M.R. (Ed). CompLife 2005 vol. LNBI 3695 (2005), Springer-Verlag, Berlin, Heidelberg 163-174
15. DeLano W.L. The PyMOL Molecular Graphics System (2002), DeLano Scientific, Palo Alto, CA, USA
16. Anderson C.M., Stenkamp R.E., and Steitz T.A. Sequencing a protein by X-ray crystallography. II. Refinement of yeast hexokinase B co-ordinates and sequence at 2.1 Å resolution. J. Mol. Biol. 123 (1978) 15-33
17. He Y., Rozak D.A., Sari N., Chen Y., Bryan P., and Orban J. Structure, dynamics and stability variation in bacterial albumin binding modules: implications for species specificity. Biochemistry 45 (2006) 10102-10109
18. Johansson M.U., Frick I.-M., Nilsson H., Kraulis P.J., Hober S., Jonasson P., Linhult M., Nygren P.-A., Uhlén M., Björck L., Drakenberg T., Forsén S., and Wikström M. Structure, specificity, and mode of interaction for bacterial albumin-binding modules. J. Biol. Chem. 277 (2002) 8114-8120