Geographical diversity and genetic relationships among Cedrus species estimated by AFLP

Tree Genetics and Genomes

Volumn 3, Issue 3, 2007, Pages 275-285

  Dagher Kharrat, Magida Bou ^a,e   Mariette, Stéphanie ^b,f   Lefèvre, François ^c   Fady, Bruno ^c   Grenier De March, Ghislaine ^d   Plomion, Christophe ^b   Savouré, Arnould ^a  

^a SORBONNE UNIVERSITÉ   (France)

^b UMR 1202 BIOGECO   (France)

^c French National Institute for Agriculture   (France)

^d INSTITUT POLYTECHNIQUE LASALLE BEAUVAIS   (France)

^e SAINT JOSEPH UNIVERSITY   (Lebanon)

^f CEMAGREF   (France)

Author keywords

AFLP; Cedrus; Fragmentation; Genetic differentiation; Genetic diversity

Indexed keywords

CEDRUS; CEDRUS ATLANTICA; CEDRUS BREVIFOLIA; CEDRUS DEODARA; CEDRUS LIBANI;

EID: 34250830443     PISSN: 16142942     EISSN: 16142950     Source Type: Journal    
DOI: 10.1007/s11295-006-0065-x     Document Type: Article

References (42)

1. Alptekin CU, Bariteau M, Fabre JP (1997) Le cédre de Turquie: aire naturelle, insectes ravageurs, perspectives d'utilisation pour le reboisement en France. Rev For Fr 49:19-31
2. Arbez M, Ferrandes P, Uyar N (1978) Contribution à l'étude de la variabilité géographique des cèdres, Ann Sci For 35:265-284
3. Bariteau A, Ferrandes P (1992) Les cédres. In: Gallais A, Bannerot H (eds) L'amélioration des plantes. INRA Editions, Versailles, pp 732-750
4. Belkhir K, Borsa P, Chikhi L, Raufaste N, Bonhomme F (2004) GENETIX 4.05, Population genetics software for Windows TM. Laboratoire Génome, Populations, Interactions, CNRS UMR 5000, Université de Montpellier II, Montpellier
5. Bou Dagher-Kharrat M, Grenier G, Bariteau M, Brown S, Siljak-Yakovlev S, Savouré A (2001) Karyotype analysis reveals interspecific differentiation in the genus Cedrus despite genome size and base composition constancy. Theor Appl Genet 103:846-854
6. Chaney WR, Basbous M (1978) The cedars of Lebanon, witnesses of history. Econ Bot 32:120-123
7. Cointat M (1996) Le roman du cédre. Rev For Fr 48:503-517
8. Davis PH (1965) Flora of Turkey and East Aegean Islands, vol. I. Edinburgh University Press, Edinburgh
9. Debazac EF (1964) Manuel des conifères. ENGREF, Nancy
10. Doyle JJ, Doyle JL (1990) Isolation of plant DNA from fresh tissue. Focus 12:13-15
11. Ellstrand NC, Elam DR (1993) Population genetic consequences of small population size: implications for plant conservation. Annu Rev Ecol Syst 24:217-242
12. Fabre JP, Bariteau M, Chalon A, Thevenet J (2001) Possibilités de multiplication de pucerons Cedrobium laportei Remaudiére (Homoptera, Lachnidae) sur différentes provenances du genre Cedrus et sur deux hybrides d'espéces, perpectives d'utilisation en France. International Meeting on Sylviculture of cork oak (Quercus suber L.) and Atlas cedar (Cedrus atlantica Manetti), Rabat, Morocco, pp 83-94
13. Fady B (2005) Is there really more biodiversity in Mediterranean forest ecosystems? Taxon 4:905-910
14. Fady B, Bariteau M, Fallour D, Giroud E, Lefèvre F (2000) Isozyme gene markers and taxonomy of Mediterrannean Cedrus species. In: Panetsos K (eds) Adaptation and selection of Mediterranean Pinus and Cedrus for sustainable afforestation of marginal lands. Proceedings of the final conference of the EU project FAIR CT95-0097. Aristotelian University of Thessaloniki, Mytilene, pp 21-26
15. Fady B, Lefèvre F, Reynaud M, Vendramin GG, Bou Dagher-Kharrat M, Anzidei M, Pastorelli R, Savouré A, Bariteau M (2003) Gene flow among different taxonomic units: evidence from nuclear and cytoplasmic markers in Cedrus plantation forests. Theor Appl Genet 107:1132-1138
16. FAO (1986) Databook on endangered tree and shrub species and provenances. In: FAO. Forestry paper 77, Food and Agriculture Organization of the United Nations, Rome
17. Greuter W, Burdet HM, Long G (1984) Med-Checklist. vol. 1, Pteridophyta Gymnospermae Dicotylidonae (Acanthaceae-Gneoraceae), 2nd edn. Conservatoire et jardin Botanique de la ville de Genéve, Geneva
18. Hoerling M, Kumar A (2004) The perfect ocean for drought. Science 299:691-694
19. Khuri S, Talhouk SN (1999) Cedars of Lebanon Cedrus libani A. Rich. In: Farjon A, Page CN (eds) Conifers: status survey and conservation action plan, IUCN, Gland, Switzerland, pp 108-111
20. Ladjal M (2001) Variabilité de l'adaptation a la sécheresse des cèdres méditerranéens (Cedrus atlantica, C. brevifolia et C. libani), aspects écophysiologiques. Ph.D. Thesis, University of Nancy 1, France
21. Lefèvre F, Achard P, Azais D, Smulders MJM, van der School J, Bovenschen J, Ivens B, Storme V, Fluch S, Krystufek V, Castiglione S (2002) Distribution of Populus nigra genetic diversity within France and its consequences for ex situ conservation strategy. In: van Dam BC, Bordacs S (eds) Genetic diversity in river populations of European black poplar, Csiszar Nyomda, Budapest, pp 85-91
22. Lefèvre F, Fady B, Fallour-Rubio D, Ghosn D, Bariteau M (2004) Impact of founder population, drift and selection on the genetic diversity of a recently translocated tree population. Heredity 93:542-550
23. Mantel N (1967) The detection of disease clustering and a generalised regression approach. Cancer Res 27:209-220
24. Mariette S, Cottrell J, Csaikl UM, Goikoechea A, Konig AJ, Lowe BC, van Dam T, Barreneche C, Bodénès R, Streiff K, Burg K, Groppe R C, Munro H, Tabbener D, Kremer A (2002) Comparison of levels of genetic diversity detected with AFLP and microsatellite markers within and among mixed Quercus petraea (Matt.) Liebl. and Q. robur L. stands. Silvae Genet 51:72-79
25. Maruyama T, Fuerst PA (1985) Population bottlenecks and nonequilibrium models in population genetics. II. Number of alleles in a small population that was formed by a recent bottleneck. Genetics 111:675-689
26. McKay JK, Latta RG (2002) Adaptive population divergence: markers, QTL and traits. Trends Ecol Evol 17:285-291
27. Miller MP (1997) Tools for population genetic analysis (TFPGA), version 1.3. A Windows program for the analysis of allozyme and molecular population genetic data. Department of Biological Sciences, Northern Arizona University, Flagstaff
28. Nei M (1973) Analysis of gene diversity in subdivided populations. Proc Natl Acad Sci USA 70:3321-3323
29. Nei M (1978) Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics 89:583-590
30. Pons A (1998) L'histoire du genre Cedrus d'après les données paléobotaniques disponibles. For Méditerr 14:236-242
31. Pons O, Petit RJ (1995) Estimation, variance and optimal sampling of gene diversity. Theor Appl Genet 90:462-470
32. Quézel P (1998) Cèdres et cédraies du pourtour méditerranéen: signification bioclimatique et phytogé ographique. For Méditerr 19:243-260
33. Quézel P, Médail F (2003) Ecologie et biogéographie des forêts du bassin méditerranéen. Elsevier, Paris
34. Renau-Morata B, Nebauer SG, Sales E, Allainguillaume J, Caligari P, Segura J (2005) Genetic diversity and structure of natural and managed populations of Cedrus atlantica (Pinaceae) assessed using random amplified polymorphic DNA. Am J Bot 92:875-884
35. Roa A, Maya M, Duque M, Tohme J, Allem AC, Bonierbale MW (1997) AFLP analysis of relationships among cassava and other Manhiot species. Theor Appl Genet 95:741-750
36. Scaltsoyannes A (1999) Allozyme differentiation and phylogeny of cedar species. Silvae Genet 48:61-68
37. Tohme J, Gonzalez D, Beebe S, Duque M (1996) AFLP analysis of gene pools of a wild bean core collection. Crop Sci 36:1375-1384
38. Toth J (1984) Quelques éléments nouveaux pour mieux situer et caractériser le cèdre de l'Himalaya vis-á-vis du cèdre de l'Atlas et du cèdre du Liban en France méridionale. Bull Soc Et Sci Nat, Vaucluse, pp 41-49
39. Tutin TG, Heywood VH, Burges NA, Moore DM, Valentine DH, Walters SM, Weeb DA (1964) Flora Europea, vol. 1. Cambridge University Press, Cambridge, UK
40. Vidakovic M (1991) Conifers. In: Brekalo B (eds) Morphology and variation. Graficki Zavod, Hrvatske, pp 129-136
41. Vos P, Hogers R, Bleeker M, Reijans M, van de Lee T, Hornes M, Frijters A, Pot J, Peleman J, Kuiper M (1995) AFLP: a new technique for DNA fingerprinting, Nucleic Acids Res 23: 4407-4414
42. Winfield MO, Arnold GM, Cooper F, Le Ray J, White M, Karp A, Edwards KJ (1998) A study of genetic diversity in Populus nigra subsp. betufolia in the Upper Severn area of the UK using AFLP markers. Mol Ecol 7:3-10